Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP2R5C Gene 0 217.07 274.98 170.84 203.62 311.02 359.89 281.09 230.32 134.24 369.52 232.86 321.54 250.58 247.41 185.49 285.60 218.83 223.81 173.76 289.48 136.81 237.47 151.24 2 328724 Transcript 1 164.91 103.85 55.48 49.34 73.37 90.27 112.19 73.99 49.93 87.94 17.15 63.86 21.71 21.58 11.42 43.11 24.08 23.85 74.79 94.01 70.96 132.93 90.85 3 422945 Transcript 0 28.53 13.40 13.00 16.04 16.53 2.73 31.67 15.32 6.23 18.67 6.33 15.54 13.31 6.18 9.99 15.34 13.26 6.96 6.67 13.80 0.09 4.17 7.05 4 445439 Transcript 1 101.91 50.30 77.71 71.25 104.97 52.99 63.85 68.05 33.86 91.80 65.79 210.41 194.88 80.92 172.07 60.56 81.65 10.50 36.82 84.13 13.50 78.83 23.20 5 350249 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 334743 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 334756 Transcript 0 0.00 6.64 2.72 0.00 0.00 0.00 2.12 0.00 2.75 8.09 2.37 0.00 0.00 2.30 4.45 0.00 0.00 5.10 0.00 2.81 5.31 0.00 0.00 8 ER1a ExonRegion 0 183.14 100.10 16.75 12.64 40.58 42.23 63.48 44.22 19.42 32.11 4.13 15.51 0.91 11.55 8.78 28.15 7.70 7.24 32.21 34.52 25.65 43.18 47.48 9 E1a_E2a KnownJunction 0 577.58 283.70 65.11 42.79 113.16 132.03 185.48 98.33 46.79 103.96 16.48 49.37 0.00 27.78 9.77 82.03 28.80 21.76 87.63 88.65 74.38 94.67 118.31 10 ER2a ExonRegion 1 176.50 126.11 63.33 45.04 90.65 94.47 175.89 82.05 47.16 83.43 18.74 79.83 22.38 26.85 7.52 47.87 27.31 20.16 96.04 112.15 78.23 179.02 97.62 11 E2a_E3a KnownJunction 1 15.26 27.56 69.36 71.39 44.23 77.68 52.86 49.29 41.64 89.48 15.32 63.77 34.74 16.95 9.64 23.33 16.64 27.53 68.71 109.55 86.67 126.69 64.11 12 E2a_E5a NovelJunction 0 0.00 0.00 0.00 2.06 6.96 9.71 2.08 6.70 0.00 2.69 0.00 0.00 0.00 0.00 0.00 0.00 8.32 4.15 3.76 15.28 8.09 10.96 0.00 13 I2_AR1 ActiveIntronRegion 0 19.96 20.87 83.13 97.60 42.82 26.80 79.59 91.54 52.85 93.33 10.93 35.43 8.42 21.77 15.29 39.26 13.56 16.83 82.81 29.40 16.35 50.52 40.08 14 I2_AR2 ActiveIntronRegion 0 37.01 31.37 58.57 53.05 53.00 39.45 137.43 61.83 24.53 43.29 3.30 9.09 2.15 9.44 12.67 14.33 5.63 10.61 37.08 23.44 12.77 20.70 15.74 15 ER3a ExonRegion 1 24.21 46.42 68.27 62.43 53.37 77.43 82.21 89.86 70.07 108.18 19.69 83.12 33.11 21.28 18.11 36.44 26.98 39.11 76.28 100.23 88.21 162.99 98.25 16 E3a_E5a KnownJunction 0 12.74 39.20 50.09 61.73 98.22 117.77 113.19 80.22 74.51 110.48 28.53 91.53 39.12 25.08 14.71 40.84 37.03 27.32 87.91 118.95 72.59 191.05 119.34 17 I3_AR2 ActiveIntronRegion 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69.27 14.07 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 1 192.18 163.14 47.55 60.12 251.93 397.28 282.86 75.94 51.15 136.19 390.67 57.63 37.73 333.07 217.87 489.87 413.79 318.83 176.90 280.49 210.41 91.16 142.01 19 E4a_E5a KnownJunction 1 51.42 26.57 54.70 42.95 40.07 12.27 22.48 82.19 65.80 189.08 696.44 164.75 102.10 340.63 183.45 87.07 761.66 194.58 44.33 315.37 458.20 90.81 39.27 20 I4_AR1 ActiveIntronRegion 0 17.44 11.62 11.62 11.67 12.09 4.71 24.52 9.90 6.28 5.26 3.73 8.20 4.61 8.10 13.17 34.67 15.14 13.11 40.29 19.75 5.53 4.90 11.60 21 I4_AR9 ActiveIntronRegion 0 43.87 16.68 22.91 28.29 30.35 12.21 23.74 17.74 12.44 12.46 2.16 18.14 11.57 5.41 9.64 4.58 5.54 4.56 5.06 15.41 3.56 3.86 5.83 22 I4_AR11 ActiveIntronRegion 0 209.89 13.21 8.26 15.77 33.73 6.34 24.26 22.26 8.00 16.97 0.46 17.16 11.15 1.04 6.34 6.74 4.88 10.47 8.80 13.60 2.59 1.30 4.66 23 I4_AR12 ActiveIntronRegion 0 513.03 14.53 4.64 3.70 24.18 4.26 13.90 16.61 4.10 11.67 0.00 18.09 27.47 2.26 11.81 11.25 4.36 16.76 6.03 14.29 4.72 2.98 4.20 24 ER5a ExonRegion 0 120.24 158.51 142.79 193.96 363.37 488.38 326.39 244.17 194.59 410.49 579.25 393.18 211.57 594.83 375.26 712.73 585.43 449.36 330.35 589.91 295.67 382.52 297.09 25 E5a_E6a KnownJunction 0 195.81 443.54 167.29 219.52 533.96 938.15 973.13 240.86 166.35 394.79 511.18 354.12 276.44 504.56 313.12 386.57 540.91 256.18 204.62 507.95 223.02 407.45 202.14 26 ER6a ExonRegion 0 267.31 423.11 199.17 218.37 332.83 478.22 480.91 276.93 184.34 497.26 524.43 621.22 527.61 509.96 298.70 565.16 479.82 365.16 252.73 456.45 281.36 443.66 261.44 27 E6a_E7a KnownJunction 0 252.93 315.40 202.65 224.31 359.08 252.64 280.61 369.63 178.99 569.18 627.74 755.65 458.74 586.79 301.87 484.40 469.66 224.35 340.15 371.55 243.53 485.28 218.10 28 ER7a ExonRegion 0 305.92 266.14 182.55 208.83 330.93 297.73 285.24 307.42 150.51 557.00 565.84 683.26 507.18 563.73 255.25 442.08 402.85 209.93 276.27 360.90 207.05 432.77 198.97 29 E7a_E8a KnownJunction 0 406.74 359.74 245.29 257.18 416.81 309.14 350.03 316.89 173.41 633.49 414.68 760.30 750.44 455.89 238.33 436.47 339.32 261.45 247.82 324.38 131.77 409.47 165.35 30 ER8a ExonRegion 1 346.49 339.59 176.04 233.69 321.11 491.35 481.59 285.60 149.28 547.86 350.75 784.10 698.64 387.68 259.41 459.45 259.28 191.19 209.19 308.79 64.55 486.48 189.60 31 E8a_E9a KnownJunction 1 370.73 441.11 207.77 227.54 411.88 706.24 695.83 345.80 179.60 604.18 400.21 961.21 1190.67 519.52 426.11 337.01 257.50 91.90 188.52 395.65 50.97 451.05 136.50 32 E8a_E10a NovelJunction 0 3.78 0.00 0.00 1.37 0.00 0.00 10.73 2.55 0.00 0.00 0.00 5.70 13.96 2.47 15.70 4.36 4.77 2.11 0.00 2.62 2.97 7.84 0.00 33 E9_Aa NovelBoundary 0 130.84 142.94 7.92 28.87 105.18 169.16 220.20 12.32 17.13 21.22 131.24 160.10 176.77 41.50 76.89 104.67 71.53 24.83 68.43 146.11 39.66 117.87 52.84 34 ER9a ExonRegion 1 440.76 347.30 206.92 257.13 361.58 465.14 531.64 341.00 180.96 593.01 406.71 909.55 921.43 506.51 378.13 437.99 351.33 163.34 228.23 381.13 84.14 468.34 158.87 35 E9a_E10a KnownJunction 1 573.66 330.80 247.12 330.03 325.13 410.10 461.50 334.79 179.02 580.59 251.43 825.12 675.28 500.50 318.81 461.08 313.98 189.44 322.55 351.99 99.77 493.79 178.24 36 ER10a ExonRegion 0 382.53 353.19 253.38 267.21 390.78 451.15 425.98 359.61 191.79 616.15 520.39 972.66 867.70 463.43 364.25 578.77 450.13 295.72 315.12 416.81 204.44 455.83 219.57 37 E10a_E11a KnownJunction 1 338.21 330.80 313.74 280.48 532.60 579.72 579.19 365.52 223.17 678.40 535.40 1346.69 986.30 579.02 557.64 684.86 581.02 393.39 441.71 611.56 222.71 509.71 298.26 38 ER11a ExonRegion 0 251.94 382.50 310.74 325.48 433.92 568.78 396.48 361.86 238.83 716.75 669.89 1235.10 1126.22 712.27 598.03 667.41 600.95 514.39 444.77 575.85 322.68 524.51 328.58 39 E11a_E12a KnownJunction 1 399.85 529.58 285.65 342.18 592.70 706.24 472.32 369.38 236.28 683.77 771.93 1242.55 1618.40 724.71 654.43 784.41 723.80 553.20 496.11 599.61 440.10 535.24 344.27 40 ER12a ExonRegion 0 340.82 343.48 334.06 364.24 510.14 515.06 539.65 396.03 255.92 721.60 723.56 1061.30 883.92 724.78 587.12 910.04 678.29 680.24 562.43 609.85 434.07 512.44 383.05 41 E12a_E13a KnownJunction 0 80.01 142.34 273.73 306.59 242.61 319.87 375.74 295.32 214.32 547.15 440.43 637.86 568.79 665.49 520.80 528.24 370.73 474.43 297.33 444.35 317.84 346.70 287.76 42 E12a_E14a KnownJunction 0 0.00 6.64 2.72 0.00 0.00 0.00 2.12 0.00 2.75 8.09 2.37 0.00 0.00 2.30 4.45 0.00 0.00 5.10 0.00 2.81 5.31 0.00 0.00 43 ER13a ExonRegion 0 429.12 316.60 317.78 354.47 465.18 552.15 437.16 378.29 244.83 631.47 573.15 791.28 782.25 649.47 527.73 778.77 560.58 540.84 430.60 567.48 367.31 439.59 350.70 44 E13_Da KnownBoundary 0 26.45 0.00 6.95 21.08 26.32 2.90 22.21 22.30 10.36 24.10 9.63 27.01 42.04 0.00 9.89 15.89 8.98 20.02 0.00 14.64 0.00 10.59 7.09 45 E13a_E14a KnownJunction 0 317.91 297.58 279.00 312.08 403.31 391.93 372.78 323.42 217.88 508.95 432.00 767.35 726.58 483.73 599.05 519.27 440.21 488.78 410.36 359.21 238.58 371.93 302.10 46 ER13b ExonRegion 0 28.53 13.40 13.00 16.04 16.53 2.73 31.67 15.32 6.23 18.67 6.33 15.54 13.31 6.18 9.99 15.34 13.26 6.96 6.67 13.80 0.09 4.17 7.05 47 ER14a ExonRegion 0 234.06 282.73 256.43 253.31 374.66 432.45 352.33 324.20 187.06 498.23 489.27 710.80 602.62 469.90 467.13 458.06 456.33 368.88 297.05 430.72 220.67 310.91 254.11 48 E14_Da NovelBoundary 0 36.97 30.92 36.52 79.24 29.20 23.45 49.06 51.47 24.33 44.59 11.06 24.16 33.93 21.72 44.75 71.61 23.19 50.49 53.84 56.37 6.05 73.66 31.07 49 E14a_E15a KnownJunction 0 242.78 265.41 249.02 258.58 356.45 439.52 361.96 319.88 213.45 525.42 351.56 666.07 526.59 457.77 426.97 361.10 428.61 215.02 149.27 419.42 153.64 287.31 219.21 50 E14a_E17a NovelJunction 0 2.74 20.46 1.66 1.86 8.66 5.34 15.59 2.38 9.52 18.10 4.79 6.30 6.33 6.83 0.00 27.26 4.02 13.76 4.80 15.47 6.12 3.12 0.00 51 I14_SR1 SilentIntronRegion 0 44.79 55.76 28.05 49.31 49.85 28.74 47.64 38.11 20.84 27.86 14.37 35.74 57.40 16.45 17.39 21.17 11.92 14.82 15.36 47.42 3.46 23.31 10.42 52 I14_AR1 ActiveIntronRegion 0 48.29 24.67 17.57 31.44 48.54 22.80 39.80 18.02 13.70 28.73 10.98 15.02 15.80 15.92 23.06 16.56 11.22 19.90 11.42 33.62 3.88 13.15 10.98 53 ER15a ExonRegion 0 238.64 235.84 236.28 297.16 309.95 410.72 303.60 361.25 210.16 538.42 358.22 698.82 556.57 378.35 408.48 502.66 420.34 323.81 268.57 461.67 218.08 386.11 264.82 54 E15_Da KnownBoundary 1 307.68 145.04 156.56 168.44 215.03 148.38 178.73 165.45 89.78 220.64 155.88 277.74 386.66 128.38 268.37 140.82 282.94 37.43 149.27 148.29 32.87 216.46 69.06 55 E15a_E16a KnownJunction 0 34.15 36.31 20.52 35.93 70.80 80.64 92.21 44.24 22.22 123.48 77.34 162.95 127.10 45.44 53.90 89.55 83.03 110.43 86.68 100.73 55.60 122.83 67.18 56 E15a_E17a KnownJunction 1 33.49 118.99 62.03 82.41 83.11 172.46 78.12 151.44 102.52 182.31 88.50 144.05 26.46 110.90 28.06 125.35 88.08 203.25 96.47 158.26 103.48 100.12 56.85 57 ER15b ExonRegion 1 101.91 50.30 77.71 71.25 104.97 52.99 63.85 68.05 33.86 91.80 65.79 210.41 194.88 80.92 172.07 60.56 81.65 10.50 36.82 84.13 13.50 78.83 23.20 58 I15_AR2 ActiveIntronRegion 0 15.42 37.09 20.25 42.96 25.87 17.90 24.08 16.96 16.17 21.30 3.31 14.02 30.15 3.87 11.47 16.98 3.30 10.65 12.74 45.49 0.00 8.33 6.29 59 ER16a ExonRegion 1 31.53 33.02 24.60 26.16 54.59 94.09 76.43 59.40 16.90 115.79 69.34 100.58 59.61 73.10 22.34 88.83 76.77 111.75 51.81 96.60 54.92 59.00 72.94 60 E16a_E17a KnownJunction 0 6.96 39.27 16.68 30.43 68.59 84.44 67.66 27.52 9.46 106.16 60.28 59.42 29.71 75.58 25.59 64.94 42.54 106.70 34.35 74.66 70.61 84.87 44.73 61 ER17a ExonRegion 0 220.89 330.46 183.32 227.16 346.01 384.69 271.86 243.51 136.27 372.76 127.71 187.88 123.07 150.40 111.76 171.52 118.95 184.21 127.72 255.04 96.92 193.63 119.35 62 E17_Da KnownBoundary 1 56.60 176.28 170.01 196.38 97.03 71.10 82.54 161.54 85.04 235.85 19.58 76.52 117.04 31.37 31.40 14.36 18.70 3.81 8.56 96.58 8.46 72.56 18.27 63 ER17b ExonRegion 1 143.24 163.07 63.19 74.70 142.87 70.58 74.24 53.45 27.94 83.44 12.95 81.61 86.63 23.69 18.12 10.15 5.04 7.18 6.85 59.90 3.58 40.84 5.82 64 IG2_AR1 ActiveIntergenicRegion 0 28.64 51.72 34.53 52.25 33.05 15.16 23.84 51.08 15.77 54.49 3.51 33.80 32.03 5.51 12.83 4.79 0.67 2.99 5.98 21.65 0.00 27.44 3.55 65 IG2_AR3 ActiveIntergenicRegion 0 7.19 1.52 6.41 16.51 6.92 13.39 5.60 7.78 6.97 10.08 4.52 6.65 4.92 10.85 12.93 15.57 6.17 6.36 4.80 4.31 8.62 6.92 13.44