Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL161662.2 Gene 0 12.68 38.44 17.37 41.36 22.24 21.04 19.00 24.81 19.09 40.01 9.45 20.68 32.00 16.02 12.60 14.03 14.39 55.87 32.28 45.20 13.78 16.52 19.13 2 380590 Transcript 1 120.91 177.10 157.98 248.29 93.03 112.83 150.91 95.48 96.92 139.04 19.58 171.03 351.23 37.50 40.64 105.44 54.20 92.72 76.65 107.13 55.28 22.03 68.36 3 IG42 Intergenic 0 5.56 23.35 11.04 28.94 13.06 14.07 11.17 13.65 9.33 28.53 4.27 4.71 2.49 12.73 6.10 8.84 11.05 48.30 21.03 31.36 11.73 10.27 13.04 4 IG42_AR8 ActiveIntergenicRegion 0 3.24 13.26 12.88 22.79 5.23 12.84 12.42 9.52 12.41 22.34 6.14 8.11 2.18 11.48 4.62 7.49 14.37 43.59 17.67 29.53 14.10 5.56 7.04 5 IG42_SR4 SilentIntergenicRegion 0 3.25 16.03 7.85 20.80 8.88 12.62 8.02 9.24 6.29 21.64 3.23 1.59 1.72 8.61 4.07 4.54 6.73 35.24 14.37 19.44 10.84 5.03 10.22 6 IG42_AR7 ActiveIntergenicRegion 0 2.62 20.67 11.22 32.80 7.60 14.35 8.48 13.35 10.27 32.15 7.63 5.23 5.01 10.39 3.10 9.36 14.32 41.65 20.43 29.31 11.04 11.76 12.93 7 IG42_AR6 ActiveIntergenicRegion 0 3.70 19.39 12.12 26.71 8.49 11.74 8.22 14.53 8.93 27.98 3.22 2.28 2.58 13.01 6.41 9.58 10.68 58.70 25.48 31.27 11.59 12.34 16.45 8 IG42_SR3 SilentIntergenicRegion 0 9.37 23.31 9.20 28.75 12.24 12.83 9.70 11.72 9.54 30.65 4.30 6.65 2.96 15.18 5.84 7.41 12.14 49.22 22.52 32.89 8.90 10.61 12.36 9 IG42_AR5 ActiveIntergenicRegion 0 0.40 18.03 12.59 31.59 3.84 9.78 10.81 30.21 15.26 45.58 3.67 7.12 1.98 16.78 12.19 13.08 15.51 54.55 14.94 56.67 11.56 15.88 11.55 10 IG42_AR4 ActiveIntergenicRegion 0 2.12 22.56 8.75 37.90 6.75 8.21 10.15 24.86 6.12 31.95 0.00 0.00 4.69 8.89 2.21 10.47 8.49 77.69 7.28 40.32 11.02 6.85 16.36 11 IG42_SR2 SilentIntergenicRegion 0 3.53 19.88 11.16 43.46 8.62 6.93 8.97 25.73 11.80 35.30 0.86 0.00 4.69 3.25 5.80 12.55 5.87 71.86 13.80 31.68 7.35 4.40 13.70 12 IG42_AR3 ActiveIntergenicRegion 0 8.16 17.14 12.25 44.98 17.20 13.88 8.13 23.70 13.76 36.54 1.93 4.33 0.00 7.19 8.29 9.34 7.54 74.70 22.30 32.22 12.28 6.25 14.68 13 IG42_AR2 ActiveIntergenicRegion 0 11.00 43.76 16.71 39.73 55.04 40.03 29.68 21.76 9.81 31.88 4.91 8.54 3.96 15.57 11.01 15.22 10.79 56.77 26.45 35.83 18.33 14.58 14.97 14 IG42_AR1 ActiveIntergenicRegion 0 9.51 50.06 15.46 46.87 20.09 8.80 19.15 15.14 9.88 33.77 5.30 4.63 0.00 15.01 9.31 14.24 10.43 51.44 24.20 37.37 17.57 13.12 17.40 15 IG42_SR1 SilentIntergenicRegion 0 1.20 25.86 9.57 24.16 14.41 13.95 8.26 11.46 6.79 19.08 2.59 1.75 0.00 9.92 5.35 8.97 8.60 35.60 22.50 31.37 11.28 10.59 15.38 16 ER1a ExonRegion 0 12.63 38.99 18.27 43.34 22.56 21.24 18.68 26.04 20.09 41.91 9.82 17.13 24.25 16.01 11.93 13.87 14.70 58.71 33.33 46.85 14.17 16.99 19.42 17 E1_Da NovelBoundary 0 223.45 129.98 567.25 755.38 112.90 54.46 188.18 634.27 653.47 628.52 37.59 71.57 45.94 24.78 52.17 149.19 132.87 926.19 111.53 157.56 65.61 73.05 145.29 18 E1a_E2a KnownJunction 1 336.50 464.46 455.34 698.05 240.41 299.94 409.08 259.22 270.66 371.61 46.59 407.53 849.46 80.23 84.68 285.40 139.50 217.88 184.29 260.78 145.30 41.52 172.18 19 I1 Intron 0 10.05 36.85 23.79 51.00 30.95 30.23 23.54 29.78 23.82 41.45 11.68 20.53 9.55 16.20 11.56 11.80 12.82 49.96 33.26 35.07 10.08 19.24 18.50 20 I1_AR1 ActiveIntronRegion 0 10.06 36.91 23.83 51.09 31.00 30.28 23.58 29.83 23.86 41.52 11.70 20.56 9.56 16.23 11.58 11.82 12.84 50.04 33.32 35.12 10.10 19.26 18.53 21 E2_Aa NovelBoundary 1 571.51 504.78 1281.98 1588.84 415.87 341.74 609.49 1495.01 1431.58 1283.73 258.28 141.95 152.26 67.87 208.79 813.03 433.57 2111.05 530.74 666.72 287.08 196.38 630.75 22 ER2a ExonRegion 1 13.60 27.84 0.32 3.50 16.13 17.30 24.98 1.19 0.00 3.59 2.33 88.43 179.99 16.26 25.32 17.05 8.41 1.57 12.35 13.75 6.36 7.59 13.49