Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SIPA1L1 Gene 0 41.77 9.31 12.88 10.24 32.98 17.76 21.30 22.80 26.26 32.28 366.62 282.08 333.31 432.48 264.93 361.80 387.24 67.15 125.64 140.78 193.49 110.59 126.65 2 381232 Transcript 1 34.23 3.35 8.37 11.29 29.29 13.17 17.71 37.83 22.02 38.73 376.78 99.63 168.17 409.56 306.69 349.57 378.21 62.59 157.65 89.23 145.67 93.50 145.54 3 358550 Transcript 0 3.48 1.07 3.47 0.06 1.47 1.47 1.79 1.25 4.32 0.05 23.63 27.32 16.91 11.21 14.47 20.88 14.26 0.92 10.95 14.20 6.08 17.26 12.36 4 IG5 Intergenic 0 8.66 1.03 0.94 1.21 4.99 0.29 4.63 1.56 1.48 1.67 4.30 37.30 27.21 4.88 10.59 17.95 18.92 1.48 5.17 8.34 3.16 1.37 4.15 5 IG5_AR1 ActiveIntergenicRegion 0 5.04 1.01 0.60 1.35 3.06 0.11 6.28 4.31 3.00 2.06 4.30 15.72 22.41 6.00 14.14 23.48 27.80 1.94 11.06 7.27 5.70 1.43 7.77 6 IG5_AR2 ActiveIntergenicRegion 0 2.69 0.84 0.48 2.40 1.06 1.11 6.56 1.82 2.14 2.01 4.26 13.69 35.11 6.97 13.82 22.33 38.32 3.51 9.39 11.70 1.88 1.84 7.67 7 IG5_SR1 SilentIntergenicRegion 0 12.68 1.36 1.61 2.32 6.71 0.54 6.27 2.01 2.37 3.35 5.04 42.37 40.83 5.02 13.89 20.09 19.51 1.34 5.03 10.54 1.92 1.34 3.59 8 IG5_AR3 ActiveIntergenicRegion 0 9.39 0.90 3.24 0.90 11.87 0.41 4.11 6.00 4.49 4.74 7.71 39.87 32.45 8.73 15.04 36.25 36.60 4.89 13.07 12.74 9.77 2.54 7.49 9 IG5_SR2 SilentIntergenicRegion 0 11.05 2.44 3.89 3.04 11.33 0.68 4.64 3.99 3.73 4.08 7.24 70.32 47.92 8.27 16.47 24.16 26.20 1.60 4.77 12.94 4.12 0.58 8.96 10 IG5_AR4 ActiveIntergenicRegion 0 17.01 3.33 4.59 0.20 16.65 0.19 7.26 8.21 8.55 5.48 12.74 86.10 52.34 17.93 24.86 19.64 57.75 0.47 7.59 17.58 8.61 7.65 8.18 11 IG5_SR3 SilentIntergenicRegion 0 30.82 3.68 2.63 3.38 13.27 1.25 7.37 3.19 4.37 3.67 6.62 56.46 36.34 5.48 18.63 27.82 27.20 2.64 8.60 13.64 4.19 2.40 8.64 12 IG5_AR5 ActiveIntergenicRegion 0 20.63 1.99 2.76 1.98 8.24 0.33 7.97 3.04 2.27 4.25 11.26 43.06 39.16 9.90 21.30 51.12 46.95 3.40 11.29 14.01 8.96 1.34 14.56 13 IG5_SR4 SilentIntergenicRegion 0 5.44 1.24 0.45 1.08 5.63 0.08 6.08 1.31 0.92 1.14 4.72 37.50 35.92 7.03 9.71 25.70 22.56 2.16 6.35 10.23 5.24 1.06 4.92 14 IG5_AR8 ActiveIntergenicRegion 0 31.22 1.31 0.27 1.99 10.84 0.27 8.88 0.21 1.36 1.01 4.47 52.32 32.23 5.39 24.83 23.49 19.60 2.31 6.18 12.90 4.34 1.87 5.94 15 IG5_SR6 SilentIntergenicRegion 0 14.14 2.20 0.78 1.63 10.65 0.00 6.74 0.98 1.42 1.90 4.34 59.92 34.14 8.58 18.94 20.17 15.46 2.12 9.22 12.00 3.69 2.83 3.59 16 IG5_AR9 ActiveIntergenicRegion 0 12.90 0.00 0.25 0.55 6.35 0.00 5.87 3.04 0.98 1.80 8.04 26.31 17.82 5.63 20.08 37.77 42.86 2.89 15.60 11.71 11.45 0.61 9.30 17 IG5_SR7 SilentIntergenicRegion 0 5.02 0.66 0.65 0.87 3.72 0.23 4.16 0.73 1.16 1.16 6.22 47.23 31.92 7.56 8.58 28.44 26.81 1.43 7.05 11.36 5.28 2.01 6.04 18 IG5_AR10 ActiveIntergenicRegion 0 21.06 2.40 1.46 0.97 5.29 1.17 7.43 2.22 2.58 1.58 6.90 52.35 36.04 6.46 12.78 23.51 27.06 2.23 8.84 12.76 5.06 2.66 6.18 19 IG5_AR11 ActiveIntergenicRegion 0 9.28 0.54 0.49 1.08 8.53 0.00 4.22 1.38 0.73 1.36 5.13 64.32 38.50 6.31 11.77 6.71 14.03 0.98 3.38 9.61 1.76 2.49 2.34 20 IG5_SR9 SilentIntergenicRegion 0 10.40 1.18 1.56 0.96 6.84 0.07 5.06 2.43 1.84 1.89 5.46 46.15 31.61 5.12 15.16 18.64 21.00 2.13 4.79 8.64 2.87 3.02 4.74 21 IG5_SR10 SilentIntergenicRegion 0 4.99 0.55 0.43 0.95 2.60 0.21 3.12 1.15 0.80 1.15 2.58 34.14 14.11 2.89 8.01 8.46 11.88 0.96 3.16 4.48 1.55 0.68 2.69 22 ER1a ExonRegion 0 3.59 2.79 0.13 2.58 15.94 5.86 1.50 4.96 3.76 3.49 85.93 103.62 108.99 110.12 60.55 76.24 114.53 3.09 20.01 39.69 20.70 34.83 16.79 23 E1a_E2a KnownJunction 1 6.37 8.49 0.00 5.59 31.66 14.25 1.85 11.62 13.80 12.20 186.26 271.29 238.46 210.02 94.57 173.03 255.54 20.64 42.17 77.28 42.44 88.30 35.77 24 ER2a ExonRegion 0 22.02 5.22 7.42 5.61 23.02 13.03 19.15 14.49 22.67 23.94 334.76 392.87 415.07 424.90 156.15 305.95 372.30 50.62 100.49 145.60 151.73 101.14 109.22 25 E2a_E3a KnownJunction 0 26.97 17.63 11.00 5.96 24.36 13.69 20.49 39.35 34.92 22.97 400.63 507.47 436.50 581.26 198.90 335.89 416.64 39.13 114.26 99.01 95.51 107.22 116.86 26 ER3a ExonRegion 0 19.55 5.68 4.89 5.30 20.18 13.91 21.86 31.36 37.43 30.78 395.21 318.96 428.94 532.69 176.89 325.39 424.18 38.59 89.02 156.07 148.52 101.95 114.53 27 E3a_E4a KnownJunction 0 28.08 9.14 7.36 5.39 15.03 24.47 46.86 43.78 52.40 31.05 446.27 337.31 550.13 732.54 241.18 384.51 464.14 45.14 116.62 192.45 211.71 135.45 147.51 28 ER4a ExonRegion 0 22.82 9.79 5.58 6.74 17.95 22.09 16.32 19.35 30.76 26.08 356.55 306.13 413.42 468.81 199.13 327.58 365.70 43.33 87.39 150.83 192.14 83.36 102.29 29 E4a_E5a KnownJunction 0 37.56 6.38 7.78 10.29 35.57 42.48 12.45 23.58 35.36 20.95 346.98 322.76 511.98 513.92 227.46 403.48 409.26 53.14 154.36 190.28 177.86 131.35 123.44 30 ER5a ExonRegion 0 13.05 6.18 6.78 7.31 17.22 17.49 17.71 20.37 32.47 29.50 464.79 369.81 598.80 557.89 254.07 519.09 522.88 77.52 181.18 188.18 215.90 140.46 174.47 31 E5a_E6a KnownJunction 0 21.11 3.29 3.58 3.83 12.99 41.57 11.92 16.88 29.40 33.31 486.97 404.53 513.28 546.18 267.51 353.16 544.65 55.34 171.20 180.44 203.00 156.76 124.29 32 ER6a ExonRegion 0 39.34 10.72 7.00 9.82 33.09 31.23 16.35 22.00 40.70 43.22 640.94 473.20 634.82 640.57 276.57 571.96 633.33 89.47 217.77 197.30 224.76 184.07 188.28 33 E6a_E7a KnownJunction 0 25.12 13.22 1.39 8.46 12.48 28.05 14.79 13.55 24.91 24.58 341.77 397.93 507.11 447.00 161.94 335.38 460.59 46.72 84.71 198.08 130.04 89.28 95.86 34 ER7a ExonRegion 0 15.42 4.89 5.71 9.76 26.71 11.88 24.09 13.89 31.88 36.35 327.25 431.55 417.18 423.58 178.92 281.56 374.97 36.91 70.84 164.92 192.48 105.31 106.44 35 E7a_E8a KnownJunction 1 0.00 3.35 3.49 11.92 6.71 2.84 12.76 12.86 28.91 38.76 200.63 377.67 314.91 263.58 101.61 264.38 259.37 35.15 50.07 161.97 112.13 63.01 94.84 36 ER8a ExonRegion 0 23.10 7.27 5.96 7.23 31.84 15.12 24.52 17.63 22.72 29.39 349.16 305.55 284.51 443.20 169.96 370.10 413.35 61.06 105.14 139.42 192.61 104.57 135.20 37 E8a_E9a KnownJunction 0 51.05 9.34 6.92 6.53 51.78 26.06 37.05 8.71 18.95 37.45 466.38 279.84 212.16 439.23 173.19 487.65 436.00 73.66 190.12 134.42 211.77 133.06 146.74 38 ER9a ExonRegion 0 22.16 6.80 3.95 8.47 25.13 14.00 14.78 8.27 17.79 25.73 328.95 216.36 159.31 368.22 203.94 351.13 371.13 60.55 113.43 121.76 194.46 107.52 110.98 39 E9a_E10a KnownJunction 1 13.78 8.42 4.23 4.79 23.01 17.26 12.06 10.51 20.78 26.94 324.40 113.14 88.96 394.32 228.44 323.93 396.91 78.06 153.51 129.37 166.37 62.89 111.40 40 ER10a ExonRegion 0 28.49 10.17 9.54 7.49 23.03 19.11 16.42 19.11 20.94 30.29 303.76 138.51 145.60 410.97 211.92 310.10 349.00 60.40 115.52 118.28 196.40 68.29 119.31 41 E10a_E11a KnownJunction 0 17.34 2.63 6.68 3.66 3.99 22.09 14.31 3.90 17.04 14.83 143.19 155.75 84.57 201.48 70.46 190.63 146.42 41.74 63.91 48.90 116.45 36.99 55.74 42 E10a_E12a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.60 0.00 9.83 0.00 15.30 8.32 0.00 0.00 2.75 3.15 0.00 0.00 43 E11_Aa NovelBoundary 0 20.82 0.00 0.00 0.00 7.81 0.00 8.30 0.00 1.39 2.93 1.95 6.30 7.30 6.89 11.13 0.00 8.23 3.73 0.00 3.26 2.41 0.00 3.41 44 ER11a ExonRegion 0 32.15 12.35 15.15 8.65 39.59 22.16 20.58 29.70 24.31 24.58 298.60 113.83 127.84 381.48 205.00 301.94 326.41 49.36 103.56 115.31 185.64 70.71 109.55 45 E11_Da NovelBoundary 0 42.01 6.51 1.83 2.73 0.00 0.00 7.95 0.00 0.00 0.00 31.74 11.70 6.66 23.37 5.19 19.91 21.60 10.94 22.31 8.82 8.46 11.33 8.71 46 E11a_E12a KnownJunction 1 58.38 21.58 10.88 8.52 37.10 23.68 23.67 27.15 21.41 39.73 341.30 57.02 141.71 320.92 249.34 342.05 350.72 65.62 76.14 110.70 160.13 63.01 96.80 47 I11 Intron 0 44.84 3.70 1.81 4.87 19.39 2.40 11.14 4.06 2.77 4.81 25.35 36.62 39.12 21.60 40.07 19.23 30.41 4.95 18.07 17.33 11.11 13.33 7.83 48 I11_SR1 SilentIntronRegion 0 27.38 3.29 1.14 4.55 12.64 3.65 9.06 3.20 0.92 6.59 23.32 37.52 27.49 24.93 32.63 21.07 38.60 3.31 17.83 24.08 9.86 14.00 7.67 49 I11_AR1 ActiveIntronRegion 0 48.05 4.23 1.46 3.90 15.40 0.88 11.22 4.94 3.53 4.37 19.78 34.08 29.68 25.27 47.65 20.91 30.08 3.97 16.30 14.63 7.74 8.66 7.98 50 I11_SR2 SilentIntronRegion 0 70.02 4.36 1.90 4.72 25.27 1.44 10.71 4.27 2.94 3.84 18.17 32.21 50.98 17.48 44.43 18.06 20.32 3.73 20.49 12.10 7.32 11.81 6.62 51 I11_AR2 ActiveIntronRegion 0 27.33 3.00 2.32 5.72 19.26 3.39 12.87 3.96 3.37 4.96 37.00 42.09 38.28 22.24 36.48 18.61 36.37 7.75 16.53 20.09 17.57 16.84 9.17 52 E12_Aa NovelBoundary 0 56.60 5.85 2.48 4.99 12.73 2.56 24.33 7.06 8.10 4.78 53.96 49.97 25.81 61.51 44.26 66.31 83.59 30.18 43.48 50.94 29.28 32.45 28.77 53 ER12a ExonRegion 1 42.25 9.08 17.27 10.73 38.70 19.22 22.94 29.60 24.44 31.20 409.85 131.03 204.30 428.73 240.41 357.13 422.62 69.61 123.62 123.42 202.92 111.84 122.02 54 E12_Da NovelBoundary 0 13.78 0.00 1.66 3.46 6.62 0.00 12.94 13.35 20.69 9.19 69.49 42.16 76.13 69.75 35.85 64.17 61.24 17.29 67.86 63.15 49.79 63.25 42.68 55 E12a_E13a KnownJunction 0 0.00 0.00 2.96 0.00 0.00 0.00 0.00 0.00 6.54 0.00 12.11 13.95 5.68 7.48 8.90 20.76 13.37 1.91 12.24 11.25 0.00 14.02 18.87 56 E12a_E14a KnownJunction 1 34.23 3.35 8.37 11.29 29.29 13.17 17.71 37.83 22.02 38.73 376.78 99.63 168.17 409.56 306.69 349.57 378.21 62.59 157.65 89.23 145.67 93.50 145.54 57 I12 Intron 0 20.04 4.16 1.89 3.91 17.85 6.16 10.48 8.95 10.55 10.52 66.39 93.27 103.71 51.35 28.27 58.16 54.90 14.43 30.98 43.48 32.86 46.60 28.70 58 I12_SR1 SilentIntronRegion 0 21.95 6.57 1.28 5.97 16.98 5.05 7.65 7.66 10.31 10.55 61.03 96.13 128.76 44.30 30.54 45.19 46.41 7.33 25.66 41.65 18.00 48.98 22.70 59 I12_AR1 ActiveIntronRegion 0 15.27 3.92 2.23 3.70 20.10 5.03 12.63 9.27 10.87 9.17 70.31 102.83 100.58 52.01 27.08 64.78 62.89 16.57 36.29 49.86 38.24 44.13 28.89 60 I12_SR2 SilentIntronRegion 0 26.85 2.91 1.74 2.86 14.70 8.85 8.83 9.33 10.22 12.81 63.65 75.42 92.08 55.26 28.80 56.09 47.41 15.74 25.77 34.10 34.09 49.27 32.60 61 E13_Aa NovelBoundary 0 21.26 0.00 13.25 10.22 44.65 29.87 8.08 9.73 14.35 19.15 62.49 102.48 80.03 57.74 61.81 79.47 90.70 7.96 67.20 46.02 38.05 62.64 9.82 62 ER13a ExonRegion 0 10.45 3.20 3.77 0.19 4.42 4.40 5.36 1.32 5.27 0.15 56.45 62.61 31.42 26.14 30.07 38.12 24.63 0.85 20.63 26.17 15.64 31.68 18.23 63 E13_Da NovelBoundary 0 48.53 9.08 0.00 7.36 27.42 6.87 10.51 13.14 18.72 6.90 108.08 73.37 73.53 36.14 22.99 71.95 68.44 26.78 39.53 23.71 26.50 58.29 35.00 64 E13a_E14a KnownJunction 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 2.42 1.16 0.00 2.32 5.40 13.64 0.00 4.45 3.76 4.77 0.00 0.00 5.18 2.59 6.06 0.00 65 I13 Intron 0 36.23 6.87 4.25 6.15 21.81 12.60 14.03 12.60 15.22 9.35 93.86 104.53 96.62 65.87 44.37 86.17 86.86 23.32 50.81 50.54 57.71 74.96 46.50 66 I13_AR1 ActiveIntronRegion 1 36.39 6.90 4.27 6.18 21.91 12.66 14.09 12.65 15.29 9.40 94.27 105.01 97.04 66.17 44.58 86.56 87.25 23.42 51.05 50.78 57.97 75.30 46.71 67 E14_Aa NovelBoundary 0 39.04 14.41 12.24 3.33 30.39 7.84 4.11 13.10 17.30 15.96 110.66 86.88 114.28 78.82 46.48 140.73 97.43 50.20 47.91 34.45 93.35 48.80 79.73 68 ER14a ExonRegion 0 43.93 6.41 12.22 11.64 32.81 20.60 27.96 36.44 27.99 37.84 440.41 227.72 280.65 480.73 286.93 449.17 470.78 103.32 152.23 150.78 250.35 158.44 144.44 69 E14a_E15a KnownJunction 0 64.09 8.62 16.20 12.72 23.26 13.06 29.46 35.65 23.67 58.10 428.69 159.80 212.32 371.18 262.69 398.87 484.99 86.35 69.08 172.70 258.91 162.15 103.72 70 ER15a ExonRegion 0 69.55 10.82 13.65 11.26 32.07 20.40 22.11 32.75 30.15 40.27 437.10 189.44 271.03 464.78 372.33 400.08 461.50 93.38 161.58 147.65 271.26 131.95 146.16 71 E15_Da NovelBoundary 0 21.34 0.00 0.00 0.00 0.00 2.90 0.00 0.00 2.92 0.00 0.00 6.30 32.63 9.59 8.78 33.15 26.09 5.84 8.66 14.96 2.72 0.00 3.67 72 E15a_E16a KnownJunction 0 119.80 20.65 16.41 12.22 56.45 34.24 29.81 32.28 25.81 38.52 474.96 207.82 199.34 396.73 347.36 372.21 444.88 113.08 149.27 128.47 262.74 129.51 135.90 73 ER16a ExonRegion 0 96.22 11.52 30.34 18.55 47.61 24.76 25.39 50.99 33.44 49.13 495.30 228.92 443.42 536.23 462.15 579.76 464.71 128.90 220.61 149.33 279.61 161.41 199.46 74 E16a_E17a KnownJunction 1 165.07 22.17 47.13 32.00 95.25 29.19 36.83 62.35 45.77 71.96 623.84 311.35 785.34 658.66 552.45 840.38 589.53 161.96 391.82 176.54 381.29 267.35 255.24 75 ER17a ExonRegion 0 113.22 19.21 34.69 25.36 78.63 32.74 37.45 54.71 41.85 53.86 627.99 295.60 603.49 588.74 523.41 654.62 634.35 135.46 244.58 173.39 310.92 175.03 227.71 76 E17a_E18a KnownJunction 0 186.63 24.80 44.38 32.63 95.59 53.78 62.98 52.12 51.82 74.86 816.05 317.05 547.37 627.70 798.69 1216.77 722.39 170.41 625.62 151.42 330.76 331.70 324.29 77 ER18a ExonRegion 0 108.09 12.00 32.64 25.29 54.49 21.86 24.95 36.13 39.39 49.01 487.16 312.16 461.35 502.70 512.54 540.12 434.56 113.50 202.51 146.89 254.18 143.63 165.74 78 E18a_E19a KnownJunction 0 154.77 10.06 21.14 25.04 73.34 43.78 40.67 25.92 33.59 45.88 471.65 245.18 292.19 490.61 429.57 364.86 387.56 111.97 124.62 137.04 271.45 99.57 144.18 79 ER19a ExonRegion 0 93.00 14.73 26.51 21.96 56.08 19.50 28.24 30.41 30.65 53.40 387.72 209.05 238.39 390.61 479.08 390.80 311.36 95.69 125.25 138.47 273.86 114.45 119.86 80 E19a_E20a KnownJunction 0 77.72 30.06 30.87 21.44 76.15 34.87 46.90 48.84 40.36 43.22 338.77 148.70 244.30 452.47 644.79 345.89 303.04 67.73 125.84 147.20 272.01 92.95 123.95 81 ER20a ExonRegion 0 93.20 16.68 30.34 16.20 64.71 28.50 23.91 29.04 23.17 46.91 319.18 139.90 163.38 403.30 479.97 313.39 291.05 65.86 105.12 135.69 207.21 95.59 131.08 82 E20a_E21a KnownJunction 0 177.36 11.77 31.52 23.74 80.14 31.00 30.69 38.32 19.62 48.08 266.54 88.23 144.80 222.14 376.29 335.81 269.94 88.30 110.31 123.10 135.60 94.61 92.28 83 I20_AR2 ActiveIntronRegion 0 11.65 1.57 2.70 1.97 7.93 0.18 3.33 0.71 2.02 4.02 7.50 5.09 9.59 8.29 19.11 9.45 13.33 3.93 8.40 4.50 3.53 4.82 2.92 84 ER21a ExonRegion 1 79.71 24.47 28.79 16.18 63.93 19.24 27.23 31.46 28.04 43.66 345.10 101.77 121.94 397.74 485.12 311.86 300.85 79.69 132.77 134.27 169.94 95.60 122.82 85 E21a_E22a KnownJunction 0 90.83 24.47 49.02 13.02 69.86 13.17 49.37 39.84 40.88 62.94 351.30 123.64 159.73 480.84 661.85 326.50 259.75 77.56 147.96 147.39 204.24 121.36 153.31 86 ER22a ExonRegion 0 56.73 21.46 24.26 17.03 51.06 23.51 23.93 24.69 24.68 37.44 237.91 111.18 121.59 279.97 471.22 266.39 214.97 58.25 127.33 108.43 154.75 103.69 96.66 87 IG6_AR1 ActiveIntergenicRegion 0 51.82 20.86 6.49 12.16 42.93 16.23 17.83 13.55 18.57 29.49 30.25 49.40 43.29 34.28 33.01 40.20 34.63 23.59 72.05 77.62 48.41 44.46 40.61