Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CLMN Gene 0 9.48 2.89 18.97 47.60 28.76 29.99 25.69 35.97 45.93 35.47 24.38 9.96 80.36 40.47 74.06 21.53 27.37 18.36 15.79 18.09 1.15 15.38 10.90 2 298912 Transcript 0 10.83 1.85 28.35 50.21 36.90 28.21 30.14 41.33 52.73 50.99 57.27 26.31 170.63 92.06 203.33 42.36 63.68 21.76 20.45 31.18 2.40 26.78 18.32 3 ER1a ExonRegion 0 1.09 0.52 0.31 5.66 3.76 5.85 4.30 5.64 4.32 5.91 11.86 0.17 6.06 9.65 16.41 4.29 2.62 6.62 3.91 4.65 1.14 1.77 2.64 4 E1a_E2a KnownJunction 0 0.00 0.00 1.83 23.17 11.71 12.10 6.45 18.32 12.62 13.78 36.54 5.40 6.82 28.96 37.33 7.35 11.87 5.84 13.74 18.41 0.00 2.63 4.35 5 I1_AR10 ActiveIntronRegion 0 2.12 1.29 3.23 8.92 0.00 3.67 7.40 3.46 9.43 2.29 0.00 4.33 17.05 0.00 2.37 0.00 3.75 0.00 0.00 2.71 0.00 1.80 0.00 6 I1_AR11 ActiveIntronRegion 0 2.75 1.18 8.70 21.42 13.72 2.91 7.74 11.55 6.51 4.44 0.28 0.26 5.36 0.00 4.19 1.50 1.43 1.06 1.38 1.08 0.00 0.45 0.64 7 ER2a ExonRegion 0 6.11 1.67 7.71 20.31 8.11 6.95 13.65 26.48 22.91 24.47 35.17 5.80 48.03 41.28 50.87 20.90 24.33 7.75 18.08 20.97 0.00 16.06 12.93 8 E2a_E3a KnownJunction 0 3.78 0.00 11.24 25.67 16.04 0.00 19.48 27.52 32.00 31.59 33.48 12.30 134.41 57.04 79.73 35.63 31.42 8.95 23.91 23.39 0.00 18.98 22.54 9 ER3a ExonRegion 0 4.98 0.49 12.97 36.63 27.29 14.56 34.41 29.73 41.20 41.59 49.51 20.11 125.85 60.80 92.42 25.63 42.12 18.77 14.10 28.06 0.00 19.14 13.25 10 E3_Da NovelBoundary 0 3.70 0.00 6.03 18.78 16.64 2.33 4.50 7.06 11.49 2.63 0.00 0.00 7.63 2.47 4.94 0.00 4.77 0.00 0.00 6.33 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 7.26 3.35 14.84 48.58 38.46 25.44 29.46 46.17 39.64 53.99 60.65 19.96 88.63 100.89 113.60 55.80 40.11 18.90 17.51 29.59 0.00 22.29 11.61 12 ER4a ExonRegion 0 4.23 0.68 20.71 55.72 27.39 24.39 24.60 49.53 52.71 56.23 56.74 33.97 225.23 94.16 132.49 42.03 84.88 20.28 23.13 29.36 1.34 39.59 18.00 13 E4_Da NovelBoundary 0 3.78 0.00 27.26 27.40 11.12 5.79 4.50 9.00 6.74 7.01 2.37 0.00 0.00 5.47 25.09 0.00 9.35 2.49 8.09 0.00 0.00 3.12 0.00 14 E4a_E5a KnownJunction 1 8.96 0.00 16.94 37.06 26.66 5.34 27.16 38.98 61.86 79.91 67.23 69.92 284.72 116.78 144.76 33.84 102.29 8.29 22.31 35.35 0.00 47.09 32.44 15 I4_SR1 SilentIntronRegion 0 2.79 0.98 6.74 16.63 5.01 3.08 4.81 6.73 5.14 4.24 1.58 0.91 5.90 2.50 9.14 2.56 3.26 3.21 3.41 2.82 0.14 1.25 1.54 16 I4_AR2 ActiveIntronRegion 0 2.05 0.33 2.95 15.91 4.32 1.97 5.50 2.08 5.69 2.98 1.76 2.30 16.15 1.53 7.66 1.43 2.13 3.60 6.05 3.43 0.00 0.00 0.47 17 E5_Aa NovelBoundary 0 9.33 0.00 4.20 32.90 0.00 2.27 17.09 11.25 1.79 6.80 9.32 13.50 7.63 9.77 6.30 0.00 8.98 2.11 0.00 2.75 3.15 5.76 0.00 18 ER5a ExonRegion 0 3.21 4.22 20.09 46.22 29.69 20.63 17.52 34.09 54.81 59.38 70.75 43.71 208.98 125.62 145.97 42.50 100.55 12.38 18.67 27.48 3.72 29.46 18.79 19 E5_Da NovelBoundary 0 3.78 0.00 8.87 26.17 11.38 0.00 8.08 4.52 4.69 4.78 2.63 5.55 0.00 2.47 4.45 4.10 0.00 1.62 4.33 5.62 0.00 5.82 0.00 20 E5a_E6a KnownJunction 0 0.00 2.57 26.82 58.00 39.13 10.85 27.82 20.62 44.82 47.44 57.49 17.41 187.81 144.92 194.45 51.52 106.22 23.67 8.75 21.03 6.18 33.37 15.71 21 I5 Intron 0 2.19 1.43 4.93 17.73 6.73 2.64 5.68 4.19 3.27 4.42 1.86 1.54 8.82 1.96 10.98 2.20 3.30 1.97 2.47 2.52 0.16 2.23 1.74 22 I5_SR1 SilentIntronRegion 0 2.20 1.44 4.95 17.83 6.77 2.66 5.71 4.22 3.29 4.45 1.87 1.54 8.87 1.98 11.05 2.21 3.32 1.98 2.49 2.53 0.16 2.25 1.75 23 E6_Aa NovelBoundary 0 0.00 0.00 12.12 25.60 0.00 5.56 16.65 9.86 21.12 19.39 11.95 10.95 18.99 31.31 26.95 9.74 40.02 12.77 14.97 23.33 0.00 6.80 6.49 24 ER6a ExonRegion 0 3.69 1.75 22.78 49.51 26.52 16.76 28.55 34.48 49.66 52.66 55.35 33.66 177.39 122.19 164.41 33.94 78.55 31.20 15.11 33.46 1.72 22.77 18.70 25 E6a_E7a KnownJunction 0 9.71 0.00 20.87 29.47 15.28 5.22 14.26 39.14 62.30 53.94 42.80 36.61 127.59 78.82 154.52 19.05 63.58 16.13 12.42 37.20 0.00 14.14 11.52 26 ER7a ExonRegion 0 7.34 4.81 28.24 39.15 14.15 27.54 25.99 39.57 54.73 53.15 53.51 16.07 147.40 99.40 153.54 35.90 71.12 31.98 13.15 32.74 4.03 23.57 19.92 27 E7_Da NovelBoundary 0 0.00 0.00 1.83 13.09 3.40 13.46 10.16 2.46 4.43 1.61 0.00 0.00 0.00 2.47 4.45 0.00 12.72 2.07 0.00 5.43 0.00 0.00 7.68 28 E7a_E8a KnownJunction 0 10.74 0.00 29.66 46.08 20.12 60.25 35.11 54.05 85.73 68.63 70.70 26.56 212.16 124.08 171.21 72.46 107.43 38.47 34.54 41.23 8.83 37.90 46.69 29 E8_Aa NovelBoundary 0 3.78 0.00 1.77 20.14 10.44 2.90 18.06 7.89 3.21 4.51 7.00 6.75 31.98 5.30 6.30 8.54 17.11 2.57 0.00 0.00 0.00 2.94 0.00 30 ER8a ExonRegion 0 4.44 2.06 20.40 46.93 26.92 37.14 27.34 49.19 71.55 57.80 74.34 33.80 211.45 133.75 201.65 81.68 84.99 37.71 39.80 35.12 2.76 37.53 32.73 31 E8_Da NovelBoundary 0 14.52 0.00 5.17 20.78 8.57 0.00 31.36 15.32 10.45 7.15 22.95 0.00 38.47 12.13 19.53 15.89 31.42 14.09 4.42 0.00 0.00 2.57 3.24 32 E8a_E9a KnownJunction 1 2.74 3.22 25.25 42.32 64.09 41.00 8.88 56.31 66.61 57.54 104.61 17.26 133.92 129.67 186.41 38.28 125.39 25.12 17.79 58.23 0.00 28.17 24.50 33 I8 Intron 0 2.20 0.86 1.89 7.64 3.70 1.62 6.25 2.57 3.04 1.71 3.49 1.84 33.12 3.94 7.37 2.97 9.13 1.06 1.84 1.14 0.00 2.80 2.82 34 I8_SR1 SilentIntronRegion 0 2.21 0.86 1.90 7.67 3.71 1.63 6.28 2.58 3.05 1.71 3.50 1.85 33.23 3.96 7.38 2.98 9.16 1.06 1.84 1.15 0.00 2.81 2.83 35 ER9a ExonRegion 0 22.21 4.02 42.60 67.92 49.76 40.83 43.70 54.84 67.88 59.54 63.02 27.56 226.00 118.93 218.61 57.35 80.79 30.86 28.89 31.70 2.32 33.83 22.83 36 E9a_E10a KnownJunction 0 74.75 3.35 60.11 92.70 133.96 106.70 99.72 61.82 92.30 75.29 75.33 6.30 241.70 111.48 347.36 82.88 93.22 48.67 84.05 33.30 8.22 46.29 36.88 37 E10_Aa NovelBoundary 0 22.89 0.00 11.65 22.54 22.75 0.00 3.62 4.93 4.54 0.00 4.58 0.00 8.28 0.00 9.02 4.36 9.35 2.20 0.00 2.75 0.00 0.00 0.00 38 ER10a ExonRegion 0 39.13 2.84 50.26 99.88 71.53 46.25 46.01 68.80 79.82 64.86 71.20 26.81 267.62 116.20 388.37 61.31 73.49 22.03 29.80 40.18 1.72 40.05 24.54 39 E10_Da NovelBoundary 0 0.00 0.00 4.55 16.91 3.14 0.00 2.25 0.00 13.28 4.24 4.84 0.00 34.74 4.94 10.75 4.36 13.18 0.00 0.00 12.27 0.00 2.33 4.35 40 E10a_E11a KnownJunction 1 25.26 0.00 63.04 106.25 76.15 37.54 52.77 65.35 88.63 85.21 67.07 32.86 383.25 97.18 405.84 49.73 61.90 24.62 8.94 35.86 3.15 42.86 23.99 41 I10 Intron 0 2.83 0.99 4.55 12.77 6.10 2.90 3.94 6.81 8.28 4.67 3.41 1.35 16.55 5.44 10.72 3.97 5.92 3.10 1.94 3.43 0.20 2.72 0.80 42 I10_SR1 SilentIntronRegion 0 2.83 0.99 4.55 12.79 6.10 2.90 3.95 6.81 8.29 4.68 3.41 1.35 16.57 5.45 10.73 3.98 5.92 3.10 1.94 3.43 0.20 2.73 0.80 43 E11_Aa NovelBoundary 0 7.48 0.00 1.36 20.68 12.14 2.73 11.08 10.84 12.96 12.92 0.00 0.00 26.13 17.25 0.00 0.00 4.77 6.55 4.80 2.94 2.78 11.39 0.00 44 ER11a ExonRegion 0 8.67 3.07 46.20 70.09 56.63 31.48 45.88 47.18 55.13 68.68 85.08 27.47 248.73 100.22 340.73 32.64 68.02 18.90 14.73 41.12 2.78 38.97 24.94 45 E11_Da NovelBoundary 0 14.15 2.96 15.70 73.12 35.23 21.35 15.41 33.72 45.11 24.74 53.54 12.45 110.22 76.93 98.03 51.61 58.25 14.59 8.47 18.47 0.00 26.27 3.67 46 E11a_E12a KnownJunction 0 0.00 2.70 37.96 49.38 54.16 24.13 31.09 45.02 38.63 48.32 72.44 38.86 122.23 61.75 234.25 55.88 42.45 15.05 0.00 47.68 6.12 25.53 3.93 47 I11 Intron 0 10.51 3.37 12.56 32.78 13.96 12.91 11.40 18.13 26.06 13.16 11.20 5.31 74.10 32.92 55.74 15.75 15.58 6.61 8.44 8.10 0.36 8.80 7.53 48 I11_AR1 ActiveIntronRegion 0 10.55 3.38 12.60 32.89 14.01 12.95 11.44 18.19 26.14 13.20 11.24 5.33 74.35 33.03 55.91 15.80 15.62 6.64 8.47 8.13 0.37 8.83 7.56 49 E12_Aa NovelBoundary 0 7.26 0.00 12.63 41.35 50.93 10.68 6.45 13.80 31.16 19.82 16.58 12.15 81.33 23.54 48.95 40.59 16.18 10.32 8.94 12.98 0.00 8.57 0.00 50 ER12a ExonRegion 1 12.04 2.03 49.64 53.88 37.95 42.67 40.19 44.33 50.45 41.13 53.99 49.64 222.15 84.55 382.31 56.26 53.60 28.11 25.08 33.17 2.64 20.72 2.36 51 E12_Da NovelBoundary 0 0.00 0.00 1.60 7.23 0.00 2.67 0.00 3.33 17.74 10.29 2.68 0.00 0.00 0.00 4.45 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E12a_E13a KnownJunction 1 3.19 0.00 63.98 60.47 21.90 32.65 26.59 43.46 46.01 43.81 48.80 50.42 182.78 122.26 690.65 48.88 27.12 28.02 9.60 25.82 2.59 15.68 4.01 53 I12 Intron 0 3.40 1.34 5.51 13.07 9.84 6.69 7.26 9.17 13.85 5.79 4.05 2.57 26.43 8.77 16.09 3.50 5.59 2.95 6.68 2.26 0.25 3.83 3.12 54 I12_AR1 ActiveIntronRegion 0 2.79 2.44 5.49 13.83 14.64 7.29 8.41 11.13 15.87 6.71 5.96 4.04 42.10 11.75 19.48 3.91 4.94 2.28 6.19 2.44 0.39 4.63 4.15 55 I12_AR2 ActiveIntronRegion 0 4.66 0.95 7.55 12.59 9.28 7.95 7.50 10.47 14.60 6.27 4.38 2.43 26.91 10.50 21.09 4.56 7.70 4.71 8.92 2.84 0.29 4.31 4.11 56 E13_Aa NovelBoundary 0 2.82 0.00 2.93 14.58 0.00 18.11 10.95 14.42 13.63 5.10 2.37 0.00 11.85 9.77 19.16 8.12 3.93 2.36 0.00 5.56 0.00 0.00 4.35 57 ER13a ExonRegion 0 7.30 2.78 14.24 44.20 25.17 28.93 22.49 32.53 41.95 29.97 14.04 5.12 44.80 20.82 35.38 13.36 13.96 15.79 13.28 14.37 0.84 11.04 8.10