Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GTF2A1 Gene 0 15.42 42.39 15.58 21.28 58.24 62.33 63.03 49.68 89.36 58.76 91.97 169.25 199.08 166.22 61.72 119.95 153.13 129.49 52.58 136.83 119.29 95.50 108.79 2 434192 Transcript 0 0.00 0.00 0.00 0.00 1.62 2.24 0.40 0.00 1.12 1.32 2.15 0.00 0.00 0.00 0.00 2.35 4.86 2.12 0.00 3.66 2.29 0.00 0.00 3 393604 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 298173 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 344860 Transcript 0 0.00 0.27 0.00 0.00 1.07 0.00 0.09 0.23 0.16 0.31 0.77 1.15 0.63 0.87 0.39 0.59 0.88 0.37 0.00 0.99 0.59 0.69 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 3.25 4.48 0.80 0.00 0.46 0.14 2.09 0.00 0.00 0.00 0.00 0.60 4.95 1.67 0.00 1.37 1.73 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 2.50 2.21 0.00 0.00 0.00 0.00 4.10 4.77 2.57 0.00 5.94 2.84 0.00 0.00 8 ER2a ExonRegion 0 12.32 24.86 6.63 12.58 21.70 34.08 32.42 25.59 31.67 26.24 46.40 27.49 53.82 79.21 38.23 98.89 85.74 71.25 45.77 62.46 74.26 47.18 97.65 9 E2a_E3a KnownJunction 0 13.93 32.03 14.46 26.54 78.86 89.83 57.32 78.74 124.51 90.09 120.71 168.20 314.75 183.77 97.53 229.26 175.97 152.26 75.20 162.22 86.74 174.03 166.03 10 ER3a ExonRegion 0 11.29 45.72 23.94 24.83 39.14 49.53 48.56 80.64 141.99 98.71 155.58 221.31 336.76 219.40 89.57 178.01 211.29 158.54 63.55 210.32 122.33 138.06 135.17 11 E3a_E5a KnownJunction 0 3.78 52.16 25.04 27.80 43.97 64.28 79.18 92.50 188.34 135.87 174.15 305.35 209.56 285.13 123.74 238.66 251.33 187.33 132.14 274.33 160.31 306.29 151.60 12 I3_AR1 ActiveIntronRegion 0 1.45 0.18 0.22 3.60 2.60 2.74 18.44 1.60 2.45 0.48 6.38 8.79 17.92 2.88 3.20 3.50 9.66 0.00 0.00 17.02 0.00 1.74 2.24 13 ER4a ExonRegion 0 0.00 0.27 0.00 0.00 1.07 0.00 0.09 0.23 0.16 0.31 0.77 1.15 0.63 0.87 0.39 0.59 0.88 0.37 0.00 0.99 0.59 0.69 0.00 14 ER5a ExonRegion 0 16.26 69.80 28.12 23.93 53.57 95.29 76.16 86.51 175.49 126.92 188.85 316.87 368.18 252.90 117.96 200.79 317.27 230.68 104.93 261.47 248.97 211.88 166.84 15 E5a_E6a KnownJunction 0 6.22 94.46 27.35 26.24 48.56 92.28 82.58 75.29 181.54 112.04 172.31 348.26 298.68 273.41 153.90 241.56 300.98 271.48 114.83 251.71 323.34 257.49 110.20 16 ER6a ExonRegion 0 14.72 75.40 21.13 15.81 35.53 92.73 71.27 60.10 145.90 89.88 172.24 254.37 282.99 225.03 69.27 161.27 235.58 203.62 57.43 203.40 257.83 148.67 124.24 17 E6a_E7a KnownJunction 0 3.33 62.88 15.43 14.88 51.10 115.27 106.56 54.42 128.07 76.31 127.87 173.01 218.17 193.36 44.26 127.66 180.46 195.70 50.73 194.37 237.78 155.10 114.56 18 ER7a ExonRegion 0 10.81 54.42 14.16 17.50 56.12 100.30 66.70 64.00 131.43 71.91 110.02 273.61 270.29 217.08 86.01 131.67 187.89 216.11 56.79 174.38 194.56 129.07 127.09 19 E7a_E8a KnownJunction 1 24.52 61.50 22.00 25.67 62.90 89.32 59.93 88.84 164.29 84.96 105.18 376.92 371.89 268.82 106.56 222.93 278.26 288.72 73.98 173.22 237.16 170.60 169.45 20 E8_Aa NovelBoundary 0 23.12 2.96 7.04 0.00 3.40 5.79 6.23 4.72 4.89 6.29 0.00 7.20 0.00 3.00 0.00 8.29 4.77 11.36 0.00 8.63 0.00 2.88 0.00 21 ER8a ExonRegion 0 12.08 33.39 25.47 29.42 47.52 81.59 70.54 75.52 135.18 81.80 146.05 257.99 273.28 253.82 104.23 207.29 207.73 283.95 56.65 222.74 195.06 162.73 188.76 22 E8_Da NovelBoundary 0 22.60 5.85 0.00 3.66 4.07 4.88 6.45 2.30 0.00 4.08 0.00 5.40 5.84 0.00 8.90 0.00 0.00 0.00 0.00 14.51 0.00 0.00 0.00 23 E8a_E9a KnownJunction 0 14.45 19.86 26.37 30.57 60.61 60.02 90.22 62.84 102.14 70.49 104.34 218.77 207.13 169.46 85.54 136.20 209.16 209.63 28.89 159.54 192.00 67.48 90.40 24 ER9a ExonRegion 0 26.30 53.08 22.87 26.30 74.23 74.01 87.46 61.85 109.22 63.49 97.99 169.02 218.62 218.36 70.69 126.46 195.18 179.82 49.58 171.59 155.67 103.62 118.07 25 E9a_E10a KnownJunction 0 30.30 64.99 21.14 20.14 230.56 90.57 169.32 22.30 108.27 50.98 85.65 211.27 243.82 157.16 50.68 87.93 128.19 127.43 63.06 142.34 90.38 85.85 80.16 26 ER10a ExonRegion 1 17.68 68.53 14.96 26.82 100.37 83.56 76.36 40.83 85.04 50.40 69.93 292.72 254.77 195.40 65.89 83.91 113.77 78.34 44.35 149.69 49.90 75.35 73.32 27 E10a_E11a KnownJunction 1 5.63 50.06 11.95 33.43 89.47 153.09 136.90 52.25 89.96 64.79 53.07 130.09 124.99 183.24 47.96 26.57 112.86 25.83 20.89 156.21 27.86 47.88 18.61 28 E11_Aa NovelBoundary 0 0.00 6.12 0.00 3.03 39.47 22.43 46.99 4.35 1.36 0.00 2.68 0.00 6.82 4.53 0.00 3.67 4.02 1.58 4.80 17.64 0.00 0.00 3.84 29 ER11a ExonRegion 1 16.65 37.75 9.87 30.76 127.29 63.35 92.33 39.02 66.03 44.17 55.80 205.77 220.48 147.20 30.78 66.28 85.54 30.63 42.02 78.88 31.20 51.91 67.62 30 IG2 Intergenic 0 40.42 94.27 31.89 40.61 110.88 67.77 69.47 57.23 63.07 65.18 37.05 116.88 57.72 50.36 48.40 31.97 39.35 17.01 20.43 63.41 12.87 83.03 29.37 31 IG2_AR1 ActiveIntergenicRegion 0 64.09 149.41 50.58 64.37 175.78 107.24 110.01 90.59 99.81 103.31 58.71 185.11 91.35 79.81 76.44 50.49 62.30 26.88 32.22 99.82 20.39 131.67 46.32