Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C14orf133 Gene 0 59.06 96.50 59.33 72.82 47.72 66.01 41.66 49.80 54.92 145.13 81.77 84.08 113.87 105.26 70.21 104.06 84.63 70.13 97.21 47.24 80.95 35.33 41.91 2 327028 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 448935 Transcript 0 0.00 0.00 1.60 0.00 4.33 0.00 0.00 2.55 3.39 1.50 2.42 0.00 0.00 0.00 0.00 3.33 9.54 2.49 11.48 2.43 0.00 3.12 0.00 4 343765 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 445370 Transcript 0 0.00 0.00 0.53 0.53 1.08 0.03 0.47 0.00 0.02 1.05 0.09 0.14 0.00 1.23 0.28 1.39 1.22 0.09 0.00 0.03 0.36 0.00 0.28 6 IG37_SR1 SilentIntergenicRegion 0 0.00 0.00 1.02 1.19 0.00 0.00 0.00 0.40 1.02 0.00 7.61 0.00 0.20 2.00 2.41 3.35 0.63 1.30 2.78 5.79 0.05 2.08 0.00 7 ER1a ExonRegion 0 8.06 23.22 0.00 0.96 8.15 11.39 12.88 0.00 1.16 2.12 12.66 11.18 0.00 15.22 31.57 12.38 23.35 7.00 12.12 4.67 36.90 12.69 6.27 8 E1a_E2b KnownJunction 0 0.00 0.00 0.00 2.00 0.00 2.21 1.85 0.00 1.27 3.79 4.42 0.00 0.00 2.12 0.00 6.66 9.16 6.76 0.00 2.36 5.13 0.00 3.50 9 E1a_E3a NovelJunction 0 8.89 5.46 21.29 9.39 0.00 35.66 15.32 3.86 15.34 42.76 21.53 20.11 40.26 21.78 6.30 19.74 13.37 25.66 15.06 0.00 8.15 2.57 22.19 10 ER2a ExonRegion 0 0.00 0.00 1.07 1.06 2.16 0.06 0.94 0.00 0.04 2.11 0.19 0.28 0.00 2.46 0.56 2.78 2.45 0.18 0.00 0.07 0.71 0.00 0.57 11 ER2b ExonRegion 0 0.05 0.04 1.23 2.90 7.29 3.94 1.13 0.00 1.05 12.69 9.54 5.43 0.00 7.57 6.23 3.10 5.83 6.76 4.07 3.62 8.06 0.00 6.00 12 E2_Da KnownBoundary 0 0.00 0.00 0.00 3.50 0.00 2.44 0.00 1.97 3.15 21.57 20.11 6.00 0.00 4.94 0.00 0.00 8.42 11.19 8.38 5.82 5.75 0.00 3.50 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2c ExonRegion 0 0.87 2.94 4.01 10.00 7.06 10.75 5.62 9.38 5.37 36.03 14.38 7.42 3.64 15.42 18.92 20.67 21.82 20.13 18.31 11.13 17.18 4.73 7.06 15 E2b_E3a KnownJunction 0 10.30 9.41 11.53 11.69 12.82 35.21 18.24 17.87 4.83 54.58 9.79 0.00 13.47 15.13 8.90 4.36 29.55 15.88 12.99 2.75 14.64 6.00 6.57 16 ER3a ExonRegion 1 9.42 16.73 26.13 27.08 11.42 38.41 18.11 28.53 31.28 110.82 75.57 37.43 35.15 48.27 31.66 33.84 81.85 38.48 37.27 34.32 88.34 19.22 10.17 17 E3a_E4a KnownJunction 1 13.26 8.35 57.04 61.33 18.59 43.67 14.53 42.72 65.83 196.63 165.20 42.61 66.07 88.70 64.40 53.40 185.23 44.69 93.84 60.66 190.52 29.45 19.80 18 ER4a ExonRegion 0 7.56 23.30 54.44 56.74 16.08 33.54 13.87 47.02 73.97 181.50 86.53 52.75 48.49 140.13 98.84 163.61 109.06 111.03 154.66 77.53 99.45 53.14 61.24 19 E4a_E5a KnownJunction 0 7.04 37.76 52.13 58.20 22.50 32.03 13.69 49.04 64.47 145.40 81.18 49.52 70.94 106.95 88.26 171.84 98.74 174.60 99.77 51.39 72.46 62.95 72.99 20 E4a_E6a KnownJunction 0 0.00 0.00 1.60 0.00 4.33 0.00 0.00 2.55 3.39 1.50 2.42 0.00 0.00 0.00 0.00 3.33 9.54 2.49 11.48 2.43 0.00 3.12 0.00 21 ER5a ExonRegion 0 13.65 68.48 53.78 51.13 41.05 120.44 53.76 57.83 73.94 181.53 87.76 69.54 89.30 132.51 68.90 105.99 116.14 97.59 118.83 65.45 104.41 46.01 32.92 22 E5a_E6a KnownJunction 0 38.23 99.32 48.14 52.81 59.76 86.14 37.19 36.60 62.56 151.07 151.04 50.12 124.83 149.51 90.49 122.28 108.74 79.84 143.72 51.58 126.58 57.07 38.24 23 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6a ExonRegion 0 73.37 87.86 48.32 64.96 45.69 69.73 40.23 60.23 73.22 190.24 158.89 79.15 122.54 162.91 106.08 156.91 136.01 112.19 205.74 68.52 123.52 60.26 66.71 25 E6a_E7a KnownJunction 0 116.91 103.93 33.77 65.59 32.00 82.17 54.81 70.57 52.84 169.69 131.82 130.09 99.99 167.93 94.20 165.00 147.26 87.72 245.65 102.14 121.64 71.34 83.06 26 ER7a ExonRegion 0 60.89 81.97 49.64 67.37 41.78 64.86 25.13 71.58 68.29 167.13 107.44 116.56 94.31 165.71 75.21 133.75 93.54 115.73 144.81 78.59 105.17 47.34 61.35 27 E7a_E8a KnownJunction 0 100.83 110.64 70.13 61.83 50.85 62.80 38.64 73.81 82.58 160.12 137.51 99.63 140.09 187.83 84.68 141.42 82.66 126.31 159.44 73.63 106.63 43.66 86.47 28 ER8a ExonRegion 0 66.28 88.05 51.55 55.26 33.66 73.19 52.96 68.50 71.92 192.42 129.57 69.50 153.13 184.07 81.54 130.77 121.73 104.35 130.21 59.13 124.92 56.22 62.75 29 E8a_E9a KnownJunction 0 84.90 92.55 43.02 49.01 41.26 72.86 56.70 69.50 70.66 204.61 149.77 84.18 197.71 192.66 67.99 146.97 161.10 76.94 135.82 59.89 135.05 39.56 30.73 30 E8a_E10a NovelJunction 0 0.00 5.59 0.00 0.00 4.33 0.00 1.85 0.00 1.27 10.21 4.90 6.30 0.00 9.59 9.39 4.10 0.00 0.00 26.82 0.00 8.40 0.00 0.00 31 E9_Aa NovelBoundary 0 7.33 0.00 2.90 3.90 25.13 0.00 7.82 1.85 1.22 5.10 0.00 0.00 0.00 0.00 0.00 0.00 8.23 1.78 0.00 0.00 2.29 3.12 4.10 32 ER9a ExonRegion 0 80.25 133.65 56.41 72.63 55.24 51.54 35.18 70.51 67.60 207.16 135.43 91.24 176.41 173.38 95.77 129.88 127.78 80.43 120.80 68.54 130.68 50.32 54.12 33 E9a_E10a KnownJunction 0 144.32 300.28 65.73 92.53 51.44 56.67 39.30 67.94 64.44 151.37 117.98 136.99 174.83 189.06 161.57 220.28 115.29 61.35 180.43 54.46 133.13 61.72 74.86 34 ER10a ExonRegion 0 112.61 293.73 70.06 101.45 39.82 53.67 38.24 69.95 89.76 217.07 129.11 139.94 140.29 181.14 125.44 151.23 109.41 84.24 159.27 59.70 124.12 53.68 52.25 35 E10a_E11a KnownJunction 0 113.58 329.55 55.91 92.76 49.75 59.57 42.84 46.74 74.19 207.97 151.72 147.50 190.90 162.99 153.66 111.17 97.52 77.60 112.57 71.20 123.74 54.62 46.61 36 ER11a ExonRegion 0 54.37 283.58 91.21 90.65 87.88 98.95 85.57 72.41 77.36 234.75 142.58 159.10 208.18 190.32 86.67 149.33 137.42 85.00 118.79 83.47 130.66 51.54 67.14 37 E11a_E12a KnownJunction 1 65.12 193.78 76.70 82.14 189.73 91.94 102.81 63.91 44.27 192.95 101.92 158.75 330.01 182.88 122.38 135.26 118.47 27.77 92.24 47.94 117.81 65.76 78.28 38 E11a_E13a NovelJunction 0 0.00 0.00 9.46 12.95 15.37 0.00 7.73 1.60 3.01 5.67 7.48 18.01 0.00 2.47 0.00 0.00 14.31 5.06 23.25 2.56 0.00 6.00 7.51 39 E12a_E13a KnownJunction 1 71.12 132.74 105.17 185.09 143.72 116.64 88.10 91.68 104.14 249.60 125.72 334.61 432.11 158.93 163.42 350.51 84.43 110.43 280.57 62.13 87.97 84.07 180.03 40 ER12a ExonRegion 1 54.73 156.37 106.56 164.03 152.04 107.54 89.65 99.88 100.49 284.10 126.26 243.38 414.90 181.38 119.99 253.48 111.17 90.21 169.73 55.17 116.95 78.43 127.64 41 I12_AR1 ActiveIntronRegion 0 8.61 20.03 6.08 7.21 7.17 5.94 11.56 3.60 4.50 9.69 1.67 6.81 10.67 5.11 6.00 7.63 5.87 1.12 8.40 4.09 1.27 2.45 2.24 42 E13_Aa NovelBoundary 0 23.12 12.17 14.19 12.39 7.56 34.18 17.67 14.79 6.51 24.74 0.00 6.60 13.47 2.47 8.90 7.95 3.55 0.00 4.52 6.26 2.59 2.33 11.95 43 ER13a ExonRegion 0 54.46 167.06 174.47 190.62 126.59 140.34 87.94 119.31 130.47 371.95 204.44 274.45 373.55 280.40 183.48 317.09 172.54 130.84 380.13 125.59 163.73 103.81 121.63 44 E13_Da NovelBoundary 0 10.67 6.71 8.10 7.26 0.00 11.07 2.25 17.58 9.37 15.82 0.00 0.00 6.82 0.00 0.00 0.00 0.00 1.70 7.72 8.95 0.00 5.14 3.67 45 E13a_E14a KnownJunction 1 67.49 209.17 220.75 180.56 179.20 190.23 52.60 116.65 143.00 417.81 245.69 352.92 470.75 248.16 77.63 245.06 247.78 81.50 196.52 113.39 234.94 51.99 58.13 46 E14_Aa NovelBoundary 0 7.56 3.29 11.15 26.74 3.23 13.74 12.63 14.99 7.78 16.95 10.37 0.00 19.15 4.47 0.00 12.73 3.83 15.79 8.00 12.27 3.15 0.00 11.35 47 ER14a ExonRegion 1 55.20 173.15 141.64 160.84 67.88 108.82 63.60 94.75 114.18 313.68 127.77 245.64 298.56 185.47 82.04 169.14 138.68 103.30 160.32 72.82 149.91 45.26 56.07 48 E14a_E15a KnownJunction 1 80.90 227.06 158.21 216.09 43.21 95.74 76.93 141.21 130.73 395.52 90.13 220.57 234.24 198.95 77.88 116.38 131.56 159.02 170.17 77.08 107.86 65.64 45.41 49 E15_Aa NovelBoundary 0 9.19 3.22 7.72 12.42 16.38 9.77 5.92 8.13 20.20 10.80 2.21 0.00 6.82 2.47 0.00 7.09 0.00 11.40 4.80 0.00 2.59 0.00 0.00 50 ER15a ExonRegion 0 148.53 323.34 134.96 162.27 104.20 129.47 112.29 88.68 98.02 285.24 158.10 222.66 310.24 203.46 119.83 250.98 158.79 136.91 287.08 83.39 169.46 75.72 106.94 51 E15_Da NovelBoundary 0 7.04 0.00 4.97 8.26 24.11 0.00 17.09 7.06 18.49 7.41 4.69 11.85 18.99 14.54 19.28 22.99 29.27 8.50 4.71 0.00 0.00 7.65 7.34 52 E15a_E16a KnownJunction 1 73.79 197.00 99.43 151.16 109.34 96.14 88.55 61.04 70.72 219.09 97.97 106.23 273.68 158.40 70.09 179.78 125.29 85.15 132.99 75.23 126.58 49.60 75.80 53 E16_Aa NovelBoundary 0 6.52 10.06 3.40 15.22 3.82 19.53 24.82 2.55 18.43 14.21 2.05 6.30 40.91 12.24 13.35 15.30 26.18 6.55 0.00 12.08 5.56 5.82 18.61 54 ER16a ExonRegion 0 78.26 168.59 85.78 138.79 139.33 126.49 78.74 83.17 80.28 239.27 127.30 131.02 205.69 181.05 107.21 161.49 176.52 124.42 157.14 87.28 137.31 62.06 78.80 55 E16a_E17a KnownJunction 0 110.32 173.39 79.80 116.27 163.84 204.20 108.73 92.33 80.90 199.93 144.09 124.54 206.97 219.97 122.01 142.18 194.58 126.39 183.82 111.86 153.39 84.99 62.66 56 ER17a ExonRegion 0 61.38 136.75 84.48 120.12 90.14 110.03 56.80 67.01 64.79 192.08 128.60 158.07 262.12 164.32 105.25 158.28 128.33 125.20 156.37 66.36 117.14 60.45 59.94 57 E17_Da NovelBoundary 0 10.89 14.80 5.44 17.95 3.23 10.22 12.01 6.37 19.24 14.69 0.00 0.00 6.82 9.65 11.13 21.87 16.55 9.74 18.73 12.14 2.47 0.00 3.93 58 E17a_E18a KnownJunction 0 72.31 120.24 104.22 164.25 57.72 109.31 67.26 66.87 55.35 187.44 137.25 176.31 193.98 186.65 106.68 120.31 124.36 98.70 154.64 93.51 99.15 63.07 44.05 59 I17 Intron 0 14.82 28.10 9.05 20.51 20.89 16.70 18.21 29.69 28.28 36.96 3.71 15.36 18.07 6.19 6.16 11.97 6.14 4.45 5.92 9.49 1.78 6.46 3.09 60 I17_AR1 ActiveIntronRegion 0 9.93 11.37 3.36 16.86 14.70 7.63 15.17 29.14 14.94 34.08 5.05 8.35 11.83 4.67 3.88 12.07 7.10 0.56 1.44 9.77 2.98 4.70 0.00 61 I17_AR2 ActiveIntronRegion 0 27.40 46.38 7.98 31.16 36.86 29.99 28.77 46.95 30.56 44.45 3.22 15.83 15.68 7.26 4.80 19.33 5.57 6.14 11.65 10.36 2.30 9.12 2.59 62 I17_SR2 SilentIntronRegion 0 13.29 52.20 5.92 29.86 14.12 27.20 30.55 41.93 44.85 50.55 7.09 37.28 30.49 4.09 7.41 6.82 7.09 2.67 4.01 18.83 3.75 9.65 5.93 63 I17_AR3 ActiveIntronRegion 1 16.40 58.06 15.93 29.48 21.36 24.33 20.32 51.88 59.06 66.25 2.00 22.44 42.52 8.72 14.60 17.09 2.15 7.14 3.40 13.16 0.55 17.02 0.69 64 I17_AR4 ActiveIntronRegion 0 21.98 37.41 21.18 37.41 41.93 27.36 17.54 51.00 53.45 66.25 5.38 32.68 18.12 8.59 9.58 18.40 4.02 5.92 10.34 12.27 0.97 5.05 11.14 65 I17_SR3 SilentIntronRegion 0 21.78 30.83 14.80 26.79 26.07 20.78 21.63 33.60 39.23 46.23 5.31 19.95 19.28 7.54 9.74 11.98 12.84 7.44 5.75 11.42 2.47 7.70 5.61 66 E18_Aa NovelBoundary 0 23.04 38.41 7.01 23.77 30.90 41.62 29.94 24.69 23.93 34.63 0.00 12.15 19.80 17.25 14.09 23.33 8.51 0.00 0.00 17.83 9.20 4.84 4.35 67 ER18a ExonRegion 0 80.45 143.87 104.03 132.11 71.72 112.98 68.07 83.72 92.52 233.22 157.99 126.65 159.30 171.04 110.01 156.40 171.99 114.28 120.46 78.82 115.38 54.43 82.66 68 E18a_E19a KnownJunction 0 103.43 158.59 107.09 141.17 115.11 94.83 70.84 71.63 86.92 250.89 137.19 145.25 203.72 158.10 122.01 210.54 149.60 103.05 102.97 70.24 109.72 50.21 87.75 69 I18 Intron 0 7.75 13.47 9.23 15.76 8.40 7.99 10.38 15.49 12.68 23.99 3.54 1.84 5.36 4.80 4.05 8.55 9.50 10.74 6.11 10.76 4.03 1.27 1.79 70 I18_SR1 SilentIntronRegion 0 7.78 13.52 9.26 15.81 8.43 8.02 10.42 15.55 12.72 24.08 3.55 1.85 5.38 4.81 4.06 8.58 9.53 10.77 6.13 10.80 4.04 1.28 1.80 71 E19_Aa NovelBoundary 0 17.71 6.31 15.88 14.88 8.66 25.61 13.73 16.39 27.63 31.24 2.16 6.30 0.00 0.00 5.81 24.69 13.37 3.73 4.05 14.32 5.00 0.00 7.26 72 ER19a ExonRegion 0 128.68 136.52 124.54 146.34 102.21 117.85 99.28 88.54 108.53 270.36 154.55 182.46 210.37 174.30 126.88 182.16 163.72 118.65 121.43 75.93 126.42 66.46 67.25 73 E19a_E20a KnownJunction 0 138.10 210.95 133.76 162.35 134.38 125.67 159.91 88.39 141.81 267.41 131.40 238.43 330.34 175.17 187.28 189.95 209.35 103.01 110.97 74.59 116.27 57.80 65.64 74 E19a_E21a NovelJunction 0 0.00 0.00 0.00 3.46 0.00 5.17 0.00 0.00 1.16 0.00 2.63 6.30 0.00 9.65 0.00 0.00 4.77 0.00 0.00 0.00 2.90 2.69 0.00 75 ER20a ExonRegion 0 125.80 152.31 124.61 169.58 115.85 137.50 84.01 95.74 120.19 271.85 144.36 137.35 184.74 170.04 153.74 189.82 145.81 121.95 118.34 73.94 148.43 54.73 78.45 76 E20a_E21a KnownJunction 0 184.55 188.72 148.90 229.94 211.29 197.16 72.16 124.33 130.61 334.00 156.51 167.15 118.34 188.00 171.46 193.71 184.48 160.67 186.08 87.25 203.62 68.28 94.84 77 ER21a ExonRegion 0 65.01 56.11 35.51 45.06 26.55 40.56 23.23 29.07 28.94 64.58 34.48 32.40 46.89 44.46 41.41 47.86 34.91 37.08 38.75 22.03 35.18 14.75 17.92 78 IG36_SR1 SilentIntergenicRegion 0 8.05 3.79 5.68 9.09 7.43 4.06 7.59 4.85 3.52 12.22 6.18 5.47 6.11 3.99 3.86 12.99 6.88 3.22 5.61 5.91 0.81 2.17 7.13