Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMED8 Gene 0 24.63 22.88 4.85 15.50 19.77 18.86 15.47 30.48 42.48 67.19 116.03 48.26 45.26 138.94 35.23 79.81 146.35 114.04 50.16 108.41 29.37 22.24 29.36 2 216468 Transcript 0 21.54 18.12 3.53 11.58 18.74 18.56 15.64 27.52 40.50 65.00 107.09 55.33 44.83 137.17 28.33 76.52 142.86 101.70 50.47 98.17 29.00 19.73 31.48 3 ER1a ExonRegion 0 3.17 7.44 0.06 0.10 0.89 9.67 6.36 1.21 5.16 7.15 31.03 4.70 4.82 41.27 11.55 35.90 63.02 10.31 21.93 20.31 10.12 6.59 22.28 4 E1a_E2a KnownJunction 1 0.00 3.35 0.00 1.53 0.00 0.00 12.01 3.98 10.79 23.26 61.96 29.11 25.97 19.37 9.27 11.45 88.27 22.55 35.58 39.63 19.27 7.23 19.72 5 I1 Intron 0 14.36 11.27 3.59 11.65 7.71 1.98 8.12 4.84 6.16 7.50 3.57 8.88 9.87 2.14 4.82 6.38 7.94 7.45 5.80 15.84 1.61 0.90 1.70 6 I1_AR1 ActiveIntronRegion 0 5.13 0.00 1.98 3.35 0.00 0.00 5.35 4.85 2.85 6.13 4.13 6.66 2.44 4.44 6.30 18.06 8.89 23.95 15.38 18.17 4.75 0.32 0.00 7 I1_SR2 SilentIntronRegion 0 14.37 7.86 3.47 8.50 4.78 2.00 8.44 3.99 7.34 8.80 4.04 10.44 10.21 1.92 4.62 7.10 9.72 9.92 8.56 20.51 1.60 0.65 1.98 8 I1_AR2 ActiveIntronRegion 0 21.76 14.55 5.53 19.49 12.98 6.48 11.28 7.05 9.73 10.34 3.25 11.98 8.47 1.16 8.79 6.55 6.80 4.94 7.05 22.32 0.72 0.00 3.77 9 I1_AR3 ActiveIntronRegion 0 29.14 7.78 4.66 13.47 8.87 3.74 8.78 2.63 11.26 14.38 2.96 9.87 9.92 1.36 8.18 5.31 7.58 6.09 4.06 14.65 2.25 0.00 1.50 10 I1_SR3 SilentIntronRegion 0 14.13 12.80 3.63 12.75 8.73 1.85 8.16 5.19 5.69 6.99 3.51 8.55 10.14 2.26 4.71 6.13 7.52 6.56 5.00 14.48 1.59 1.06 1.59 11 E2_Aa NovelBoundary 1 11.19 41.90 15.46 47.35 12.39 4.54 3.93 18.32 12.82 14.08 2.68 12.60 33.93 2.47 5.44 7.95 4.30 13.35 8.66 23.97 0.00 0.00 4.01 12 ER2a ExonRegion 0 12.24 31.95 3.65 5.92 11.85 6.48 19.05 20.87 40.24 46.62 135.52 48.39 46.01 112.27 34.41 89.88 198.10 62.87 62.54 53.00 19.92 10.71 48.44 13 E2_Da NovelBoundary 0 3.63 35.78 0.00 15.15 8.32 2.90 12.94 10.97 11.92 5.21 0.00 6.30 12.99 7.24 4.45 16.24 0.00 10.86 9.60 3.26 0.00 2.57 0.00 14 E2a_E3a KnownJunction 1 0.00 2.63 1.15 2.80 3.14 5.28 4.24 25.01 28.30 42.84 57.07 38.11 34.90 132.38 10.51 80.83 76.30 96.46 27.11 63.09 14.21 11.14 24.67 15 I2 Intron 0 33.80 38.82 8.79 24.65 24.65 6.31 14.15 15.88 11.80 19.10 7.46 13.73 22.99 9.79 13.06 17.96 13.62 17.45 11.50 21.33 2.87 3.07 5.92 16 I2_SR1 SilentIntronRegion 0 30.44 47.39 8.85 29.71 32.33 7.54 18.06 18.73 13.39 22.41 7.79 16.60 31.64 10.70 15.53 20.15 14.51 14.39 12.96 22.13 2.81 3.94 6.52 17 I2_SR2 SilentIntronRegion 0 39.01 26.22 8.75 17.22 13.31 4.50 8.38 11.71 9.50 14.28 7.01 9.51 10.21 8.50 9.44 14.80 12.37 22.12 9.39 20.25 2.98 1.79 5.05 18 E3_Aa NovelBoundary 0 48.38 27.89 5.56 25.80 30.56 4.54 41.95 15.94 12.36 24.63 9.48 5.70 13.64 12.83 10.14 11.19 11.78 23.17 0.00 11.57 0.00 0.00 7.43 19 ER3a ExonRegion 0 33.90 20.43 6.80 12.05 25.36 18.52 16.41 31.86 56.29 67.52 93.39 48.72 40.23 120.65 38.56 62.73 136.05 116.83 48.42 98.44 25.72 27.28 30.88 20 E3_Da NovelBoundary 0 8.96 25.72 15.79 29.77 4.33 0.00 0.00 33.43 17.94 27.29 5.05 12.00 13.47 23.84 34.61 18.97 25.25 55.26 16.09 35.86 2.35 2.94 7.94 21 E3a_E4a KnownJunction 0 21.11 18.22 2.54 7.39 3.31 24.82 22.57 24.23 42.04 66.03 109.45 118.84 65.42 159.34 27.20 47.25 172.04 82.99 37.18 117.54 41.08 11.02 25.44 22 I3 Intron 0 12.70 18.17 4.14 13.55 17.93 7.26 11.11 15.62 12.86 18.00 11.17 12.76 21.57 10.67 9.95 12.81 11.90 17.04 11.89 20.91 3.38 2.99 5.44 23 I3_SR1 SilentIntronRegion 0 12.96 18.19 3.91 13.69 18.52 6.82 11.19 14.79 13.02 18.43 10.71 12.72 22.05 10.80 9.65 12.21 11.45 17.13 11.85 20.44 3.12 2.80 5.32 24 I3_AR1 ActiveIntronRegion 0 10.90 18.22 5.86 12.58 13.76 10.64 10.64 21.96 11.83 14.96 14.71 13.17 18.26 9.80 12.30 17.44 15.42 16.54 12.32 24.71 5.36 4.48 6.36 25 E4_Aa NovelBoundary 0 7.56 17.56 6.45 12.09 20.03 22.26 4.24 28.26 15.08 34.17 21.85 12.45 33.11 11.95 20.77 12.99 23.84 15.13 8.38 28.32 3.15 5.94 4.18 26 ER4a ExonRegion 0 38.83 25.06 4.67 24.94 36.87 28.27 22.83 49.65 60.54 94.29 154.59 85.91 85.09 187.78 38.86 103.51 205.75 144.43 78.05 137.74 38.24 27.46 30.80 27 E4_Da NovelBoundary 0 6.67 21.25 1.83 19.51 7.47 22.37 3.75 8.26 10.62 15.63 4.74 0.00 6.82 14.66 9.77 0.00 11.50 30.88 12.24 12.14 0.00 2.39 3.33 28 E4a_E5a KnownJunction 0 27.49 22.63 3.43 16.65 50.85 30.10 18.95 35.61 61.49 107.02 127.93 53.72 62.82 213.85 23.73 136.72 168.58 128.71 70.03 135.12 39.17 25.96 42.00 29 E5_Aa NovelBoundary 0 10.00 15.26 4.58 12.85 19.61 0.00 5.61 12.86 18.84 13.46 7.63 0.00 12.66 0.00 0.00 8.63 16.08 19.65 8.94 13.93 3.09 0.00 7.85 30 ER5a ExonRegion 0 32.64 26.14 7.42 25.45 21.88 21.77 14.76 40.94 53.40 96.43 162.10 65.31 72.36 193.19 43.23 106.46 175.16 180.89 56.14 149.74 36.61 27.45 29.53 31 E5_Da NovelBoundary 0 9.04 2.89 8.19 17.61 22.67 2.78 5.39 14.42 12.56 7.47 8.00 0.00 17.86 4.53 4.45 11.54 9.26 9.29 16.09 16.30 3.03 0.00 8.45 32 E5a_E6a KnownJunction 0 46.01 14.34 4.64 16.58 30.65 38.16 17.44 38.73 47.95 98.21 140.61 77.88 34.09 195.36 35.60 95.87 161.10 169.34 73.04 137.61 40.16 36.99 46.10 33 ER6a ExonRegion 0 21.54 27.12 4.48 13.99 21.31 21.11 17.42 30.62 39.31 65.70 104.37 37.90 21.42 133.42 38.72 71.06 127.13 103.27 45.11 127.69 34.49 25.24 26.41 34 IG33 Intergenic 0 105.97 106.69 27.15 63.24 81.74 64.61 55.60 82.43 80.18 135.79 114.55 113.25 150.61 113.03 69.16 67.15 104.21 63.92 48.79 103.84 16.61 38.14 27.31 35 IG33_AR3 ActiveIntergenicRegion 0 56.64 100.68 10.24 34.35 53.09 57.85 47.13 58.73 90.61 134.16 161.82 144.43 239.04 173.09 43.81 104.66 162.68 112.07 62.13 147.07 28.96 47.32 42.72 36 IG33_SR3 SilentIntergenicRegion 0 46.63 73.70 14.29 41.95 89.30 106.03 71.83 59.16 63.05 120.08 134.34 111.68 179.20 158.03 69.25 59.70 127.78 60.00 58.30 78.57 30.58 34.20 31.14 37 IG33_AR2 ActiveIntergenicRegion 0 256.49 199.87 67.62 147.45 176.56 120.31 106.07 174.61 129.84 243.53 147.86 163.89 158.92 126.28 154.15 74.13 112.82 53.89 67.51 128.98 12.35 57.43 28.84 38 IG33_SR2 SilentIntergenicRegion 0 1.62 6.46 5.12 7.73 18.30 1.37 8.28 3.51 7.02 9.68 1.68 9.54 10.72 2.41 2.18 1.11 1.23 4.17 3.35 9.92 1.21 0.78 2.19