Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEL1L Gene 0 32.60 41.53 17.03 44.25 32.44 39.04 37.12 29.12 58.25 62.40 83.11 414.91 630.40 225.06 102.43 146.38 228.00 39.30 21.62 63.33 110.01 126.77 99.32 2 336735 Transcript 0 25.28 60.15 19.79 55.75 39.96 62.23 55.69 41.55 98.99 101.13 166.35 727.06 1062.17 503.24 186.13 324.58 503.35 90.85 42.77 140.11 293.50 213.83 222.42 3 261258 Transcript 0 42.82 68.61 31.13 54.07 53.14 35.09 27.69 38.03 67.39 94.02 57.59 115.69 115.58 30.55 41.54 154.92 317.44 69.19 32.00 61.49 213.87 149.04 101.75 4 ER1a ExonRegion 1 7.09 4.37 4.62 5.04 1.19 6.44 2.00 6.75 17.19 28.29 49.63 71.98 446.12 63.04 36.35 45.36 126.52 14.43 4.18 28.79 137.93 19.93 28.37 5 E1a_E2a KnownJunction 1 3.78 6.25 7.24 12.12 0.00 8.29 5.43 4.85 25.35 58.40 198.47 104.28 495.58 159.22 59.46 31.36 411.59 26.12 9.13 108.79 523.01 49.84 29.62 6 I1_AR3 ActiveIntronRegion 0 14.98 1.26 1.23 0.00 2.57 0.00 3.79 0.00 0.12 1.15 0.00 16.37 16.60 3.83 6.85 0.00 3.90 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 1 3.06 15.79 11.64 27.40 3.10 10.04 3.90 28.47 70.79 94.35 231.29 127.04 512.82 281.66 105.28 134.21 691.10 70.12 30.93 179.73 419.86 99.41 120.79 8 E2a_E3a KnownJunction 1 3.78 24.01 13.04 39.46 8.49 13.46 10.33 50.93 97.74 110.54 203.16 176.16 677.55 496.21 201.00 285.74 971.11 111.10 60.90 260.14 295.42 174.94 264.37 9 ER3a ExonRegion 0 20.18 39.47 17.74 41.43 25.64 41.65 50.44 35.59 88.18 102.33 123.11 438.10 920.56 418.63 217.99 321.43 425.40 94.59 43.47 145.09 178.15 189.09 208.38 10 E3_Da NovelBoundary 0 64.23 9.27 2.84 1.30 10.19 0.00 25.70 2.55 3.10 5.80 2.53 38.26 40.91 2.47 18.30 3.76 14.77 0.00 0.00 11.95 0.00 3.12 3.59 11 E3a_E4a KnownJunction 0 37.27 27.56 11.12 29.53 4.16 11.98 32.46 28.38 99.65 97.64 71.18 388.33 651.09 306.38 271.83 182.69 319.21 42.20 54.50 121.12 156.73 148.55 101.41 12 ER4a ExonRegion 0 24.94 42.57 15.08 47.69 29.61 49.46 42.38 28.61 86.09 92.74 120.04 656.51 853.28 456.45 169.03 264.02 438.47 66.32 45.11 114.29 224.06 184.12 169.38 13 E4a_E5a KnownJunction 0 48.01 80.64 26.97 59.90 52.80 55.71 80.02 42.39 106.83 108.50 178.68 795.71 1303.65 581.61 289.51 314.70 537.17 76.19 75.86 132.31 237.04 233.36 185.49 14 E5_Aa NovelBoundary 0 0.00 3.35 5.41 1.47 16.13 0.00 21.95 0.00 1.79 0.00 0.00 6.30 0.00 0.00 4.45 0.00 8.88 0.00 8.00 3.26 0.00 0.00 0.00 15 ER5a ExonRegion 0 23.26 58.69 22.17 66.61 48.16 59.11 56.66 42.75 105.10 97.36 182.77 934.23 975.88 573.88 224.96 335.23 552.81 83.51 59.35 153.09 257.44 217.57 235.21 16 E5a_E6a KnownJunction 0 28.89 67.75 36.66 82.24 88.29 85.58 74.02 44.81 151.07 117.49 236.85 1156.88 1234.33 569.67 174.67 454.15 651.05 126.35 53.08 150.40 285.35 318.35 322.50 17 ER6a ExonRegion 0 27.90 50.38 19.21 61.62 51.84 66.06 59.48 50.75 100.31 87.50 198.63 1224.76 1188.82 548.75 179.09 419.25 572.90 106.49 60.29 138.21 288.29 257.01 269.77 18 E6a_E7a KnownJunction 0 3.19 61.77 18.04 56.40 38.71 29.47 29.15 28.14 82.49 89.40 166.36 1061.90 1165.02 480.08 116.32 291.46 488.64 100.52 17.88 130.07 328.47 195.52 158.09 19 ER7a ExonRegion 0 16.11 43.99 14.66 48.96 45.49 26.66 33.98 37.35 80.99 92.67 148.73 979.18 762.22 543.33 133.51 347.63 534.50 85.92 39.94 116.43 311.58 204.26 198.55 20 E7a_E8a KnownJunction 0 30.30 80.38 12.09 35.69 57.47 31.69 49.11 42.10 70.60 87.33 137.14 960.91 532.11 608.04 162.93 422.20 492.38 72.34 49.98 119.40 262.43 192.64 267.19 21 I7 Intron 0 16.79 2.30 1.03 0.00 0.00 1.04 3.75 0.00 0.00 0.00 0.00 15.87 8.75 1.52 1.16 1.68 5.61 1.05 1.81 1.21 0.00 0.00 0.00 22 I7_SR1 SilentIntronRegion 0 17.17 2.36 1.06 0.00 0.00 1.04 3.84 0.00 0.00 0.00 0.00 16.24 8.90 1.55 1.19 1.72 5.74 1.07 1.85 1.23 0.00 0.00 0.00 23 ER8a ExonRegion 0 35.70 52.87 13.05 36.91 56.95 51.25 58.34 39.90 77.79 86.59 183.88 1051.77 693.81 596.97 146.03 426.40 536.84 100.70 41.57 129.08 324.31 183.38 259.89 24 E8_Da NovelBoundary 0 14.74 9.93 7.21 1.80 4.24 0.00 7.99 2.34 0.00 0.00 0.00 6.30 26.95 4.36 0.00 0.00 17.58 0.00 4.80 3.13 4.94 0.00 0.00 25 E8a_E9a KnownJunction 1 26.52 62.36 13.16 37.19 56.88 73.71 72.21 28.63 76.07 107.90 225.85 1039.24 717.81 588.97 131.28 424.16 528.84 98.87 30.21 150.97 346.63 200.78 282.72 26 ER9a ExonRegion 0 19.33 43.50 16.39 46.97 42.42 56.69 64.73 31.11 72.47 87.30 161.68 677.61 705.39 481.91 173.33 365.10 438.46 96.29 38.42 116.68 281.32 213.26 255.17 27 E9a_E10a KnownJunction 0 9.56 29.07 25.87 61.50 16.30 106.64 75.61 34.50 84.37 69.41 110.08 513.17 857.74 466.89 157.24 274.97 367.65 91.36 49.70 145.92 215.36 150.08 241.41 28 ER10a ExonRegion 0 22.83 56.10 21.72 56.21 37.10 80.79 61.63 32.09 90.92 86.23 182.45 488.06 823.27 523.11 180.06 334.74 474.90 90.31 42.72 153.34 285.49 206.15 228.74 29 E10_Da NovelBoundary 0 7.56 3.09 4.76 23.21 8.49 5.00 12.01 2.51 3.15 4.32 5.11 24.76 12.99 12.24 0.00 8.20 23.19 0.00 4.71 9.65 0.00 0.00 3.84 30 E10a_E11a KnownJunction 0 27.86 56.37 21.55 79.01 43.21 92.50 54.85 50.52 96.67 111.07 191.94 705.68 1076.23 554.95 209.66 305.48 441.89 107.07 35.67 169.89 304.99 250.57 243.20 31 E11_Aa NovelBoundary 0 20.67 15.52 8.63 26.97 7.47 5.17 4.50 6.41 6.02 6.58 4.95 24.46 19.48 12.13 24.60 8.03 8.04 2.57 0.00 0.00 8.65 5.08 6.32 32 ER11a ExonRegion 0 31.56 40.85 16.92 73.60 33.56 47.78 50.40 39.18 95.34 105.43 182.64 675.24 1064.31 476.07 212.10 327.25 433.52 103.44 35.32 167.04 233.09 229.19 238.85 33 E11a_E12a KnownJunction 0 22.08 66.04 13.54 65.59 43.38 72.06 66.95 33.48 97.28 106.08 164.73 622.85 1125.41 508.27 221.52 464.92 393.45 90.04 65.04 199.36 263.11 280.82 236.54 34 E11a_E13a NovelJunction 1 3.33 0.00 0.00 0.00 0.00 0.00 6.01 4.31 9.75 1.32 9.32 6.15 38.47 14.83 4.45 17.09 14.03 4.27 0.00 3.26 2.29 12.49 3.24 35 ER12a ExonRegion 0 19.08 60.33 15.04 58.19 30.05 99.40 81.51 34.99 101.76 98.22 195.53 688.45 1041.73 575.48 183.12 394.56 499.68 86.92 48.98 156.92 319.35 245.19 256.68 36 E12a_E13a KnownJunction 0 18.00 64.13 19.16 48.78 42.19 80.12 70.57 26.21 102.14 92.94 226.64 695.78 1167.94 642.89 243.40 282.58 507.99 86.22 44.24 141.96 310.86 230.18 214.52 37 ER13a ExonRegion 0 19.97 57.98 19.13 57.19 40.82 61.90 62.60 37.83 98.57 117.76 198.47 703.70 1067.82 654.27 228.12 369.88 547.69 102.29 50.23 161.59 307.81 265.33 268.85 38 E13a_E14a KnownJunction 0 13.85 80.18 10.85 73.05 40.49 69.11 48.36 47.44 107.64 128.67 161.78 897.14 981.27 648.31 225.60 331.02 467.32 92.81 33.60 116.07 320.25 272.86 251.65 39 ER14a ExonRegion 0 12.63 77.08 16.49 55.66 36.65 88.34 55.10 38.00 104.73 104.20 174.21 727.83 1069.40 523.66 169.01 320.94 585.20 98.05 37.21 141.27 359.27 255.55 247.47 40 E14_Da NovelBoundary 0 2.96 6.71 1.83 18.01 0.00 0.00 18.55 2.46 8.56 8.68 9.16 60.32 65.09 21.07 6.30 19.82 35.25 16.33 4.80 10.61 23.23 14.45 4.10 41 E14a_E15a KnownJunction 0 20.45 51.44 28.95 48.81 28.35 121.24 78.70 25.30 100.98 94.18 176.94 689.32 1070.22 556.13 207.06 368.79 664.23 85.52 25.60 125.28 263.54 238.57 283.06 42 E15_Aa NovelBoundary 0 17.19 24.67 0.00 14.82 6.88 0.00 8.08 8.21 6.89 3.81 5.16 54.62 92.53 17.54 4.45 11.36 31.51 0.00 3.58 5.11 8.03 3.12 0.00 43 ER15a ExonRegion 0 25.73 77.65 21.00 50.26 28.52 78.25 57.56 46.45 92.54 111.11 137.83 691.24 1113.03 505.05 150.73 366.04 443.52 98.98 43.94 107.45 256.18 200.99 235.10 44 E15a_E16a KnownJunction 0 52.53 109.39 25.13 84.21 55.94 129.02 76.93 70.57 141.75 136.70 178.10 797.06 1899.71 804.82 289.26 475.35 633.10 131.66 65.70 177.95 422.43 302.55 341.79 45 E16_Aa NovelBoundary 0 31.04 2.50 8.63 1.30 20.88 2.73 27.34 9.20 4.66 8.65 2.47 37.96 12.99 11.77 19.66 11.19 21.41 4.68 0.00 11.89 2.59 5.88 4.27 46 ER16a ExonRegion 0 32.06 53.87 18.50 57.52 29.11 70.71 63.38 58.08 108.18 118.28 146.25 702.91 1251.11 513.85 180.40 348.46 458.25 110.47 36.51 117.39 285.12 240.70 264.83 47 E16a_E17a KnownJunction 0 27.63 72.42 16.14 69.65 19.02 73.03 64.08 74.51 125.78 127.22 176.47 975.77 1944.19 611.58 207.92 397.50 569.99 109.77 58.73 150.72 403.90 220.20 261.98 48 ER17a ExonRegion 0 30.68 97.60 26.24 67.20 32.50 65.63 63.84 67.58 123.57 130.25 188.64 871.74 1482.22 549.28 198.61 385.12 607.36 118.81 45.84 151.99 370.91 258.49 270.42 49 E17a_E18a KnownJunction 0 47.86 111.16 32.02 74.55 88.54 123.17 78.30 68.96 168.40 117.84 191.10 954.01 1823.26 578.32 222.88 395.62 575.69 125.77 45.08 168.42 362.08 248.12 227.83 50 ER18a ExonRegion 0 48.76 116.89 34.16 79.97 85.12 89.59 87.01 65.01 153.15 110.99 173.06 978.23 1866.88 585.61 245.02 372.47 590.42 108.43 59.80 156.45 338.61 287.28 254.00 51 E18_Da NovelBoundary 0 29.78 2.76 3.13 9.96 10.36 0.00 12.06 1.85 1.79 3.87 2.68 29.71 98.05 4.89 14.34 17.17 31.51 7.75 9.41 21.28 3.03 3.06 4.10 52 E18a_E19a KnownJunction 1 30.45 101.96 39.35 75.51 63.92 45.83 81.13 57.30 146.67 119.94 101.18 1007.58 1417.60 526.99 186.41 322.74 435.06 98.41 26.35 144.45 288.99 253.45 248.66 53 E19_Aa NovelBoundary 0 22.45 3.22 4.02 6.09 29.29 0.00 18.28 1.64 8.56 4.67 10.00 30.91 56.17 12.18 0.00 24.95 9.44 0.00 0.00 3.13 3.15 3.12 0.00 54 ER19a ExonRegion 0 25.98 86.15 30.19 74.13 40.78 60.57 85.50 69.82 164.12 125.53 157.27 982.92 1621.61 527.99 226.39 369.89 534.04 104.71 35.23 137.78 300.04 271.93 248.90 55 E19_Ab KnownBoundary 0 38.90 96.23 30.01 89.30 42.61 83.82 114.65 89.17 199.27 151.66 209.74 1027.53 1980.55 544.59 250.08 417.58 559.61 129.87 46.78 157.36 284.18 289.88 287.08 56 ER19b ExonRegion 0 48.04 105.41 45.64 98.12 72.30 87.28 75.28 67.24 164.43 140.53 217.95 983.59 2006.40 621.19 261.24 409.94 533.02 140.59 53.29 153.74 292.56 291.14 314.89 57 E19a_E20a KnownJunction 0 64.46 135.77 19.37 85.40 107.30 107.27 79.27 60.13 132.64 116.02 235.85 876.89 1589.67 650.13 293.59 377.94 565.22 91.65 52.33 183.44 302.89 288.78 272.39 58 ER20a ExonRegion 0 54.05 110.13 27.81 86.14 79.93 98.55 60.33 55.49 114.93 126.75 231.15 735.01 1317.66 518.47 230.39 336.00 573.34 97.22 64.93 147.30 331.57 263.00 239.60 59 E20_Da KnownBoundary 1 32.82 43.22 14.10 41.19 15.45 43.04 31.71 22.55 48.61 57.57 102.87 191.16 254.37 69.99 36.71 119.46 198.22 49.25 23.15 56.31 106.75 83.83 63.25 60 E20a_E20b KnownJunction 1 42.82 68.61 31.13 54.07 53.14 35.09 27.69 38.03 67.39 94.02 57.59 115.69 115.58 30.55 41.54 154.92 317.44 69.19 32.00 61.49 213.87 149.04 101.75 61 E20_Ab KnownBoundary 0 9.71 37.10 12.18 33.73 19.02 12.66 21.29 18.73 44.33 64.95 53.80 227.77 447.37 100.89 44.13 136.72 196.63 43.90 13.37 48.00 130.72 145.92 71.62 62 ER20b ExonRegion 0 52.91 84.73 32.27 91.31 83.84 66.02 55.17 49.55 107.87 142.98 211.33 863.01 1407.01 442.84 262.08 326.93 575.46 119.49 57.34 148.23 351.12 263.22 214.37 63 ER20c ExonRegion 0 43.57 96.44 32.13 86.30 76.06 55.33 55.53 56.34 107.43 135.20 211.31 839.12 1564.75 530.08 256.41 362.74 514.75 148.10 53.64 149.67 385.98 211.68 255.02 64 E20b_E21a KnownJunction 0 55.86 96.30 40.51 67.22 87.27 36.34 96.72 41.77 102.69 121.17 244.43 759.55 1630.25 653.31 266.40 443.05 504.07 151.18 49.04 167.21 380.18 284.49 309.01 65 E21_Aa NovelBoundary 0 3.56 11.71 2.72 14.95 3.82 16.01 1.90 3.70 3.67 5.94 2.21 11.25 92.69 7.48 0.00 11.19 23.00 0.00 3.95 8.56 3.15 0.00 3.59 66 ER21a ExonRegion 0 48.82 65.04 28.62 73.82 56.37 69.78 59.03 54.37 87.89 113.21 175.65 516.63 856.20 512.87 224.32 314.53 442.62 123.39 52.02 118.70 353.63 190.43 210.12 67 E21_Da KnownBoundary 1 95.87 99.39 30.84 72.48 101.87 80.47 90.00 61.90 95.77 128.86 200.00 323.51 411.66 448.65 194.20 177.56 494.72 114.91 50.82 106.74 273.98 164.78 152.63 68 ER21b ExonRegion 0 34.05 32.04 14.70 37.14 27.86 28.11 28.06 21.58 39.29 42.75 43.62 279.13 416.74 95.33 59.76 58.26 107.06 10.62 10.39 30.36 25.89 85.80 38.43 69 IG5_AR13 ActiveIntergenicRegion 0 7.24 0.12 0.00 1.42 0.00 0.00 0.00 0.00 1.75 0.71 0.00 13.33 0.00 2.31 2.67 6.24 3.37 1.26 0.00 0.00 0.00 0.00 0.00 70 IG5_AR11 ActiveIntergenicRegion 0 4.23 0.00 2.45 0.00 1.53 0.00 4.73 1.73 1.24 0.00 0.00 16.08 7.37 0.00 2.90 0.00 3.30 0.00 0.00 2.13 0.00 0.00 0.00