Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 VASH1 Gene 0 68.30 70.18 168.27 109.63 77.19 150.53 87.94 149.82 94.73 228.99 19.21 3.70 6.54 9.26 13.70 9.82 12.06 127.68 109.98 98.86 59.60 62.38 54.91 2 417529 Transcript 0 9.01 3.11 12.18 4.65 10.17 11.69 7.68 9.35 8.14 25.38 2.14 0.00 0.00 0.00 0.00 0.00 0.00 7.70 2.29 6.81 8.50 6.54 1.83 3 167106 Transcript 0 37.90 38.23 125.28 64.95 37.21 136.76 53.25 117.97 77.53 199.51 14.63 0.92 7.01 2.46 3.94 3.19 8.80 133.71 94.55 86.85 49.19 54.42 51.93 4 ER1a ExonRegion 0 11.52 19.62 60.02 26.75 18.68 63.08 38.51 59.90 51.92 132.24 10.13 0.13 4.50 0.83 0.86 0.00 5.44 85.69 75.97 64.55 43.43 39.06 30.74 5 E1_Da NovelBoundary 0 0.00 2.76 9.28 13.88 7.81 2.44 16.30 1.81 7.84 11.52 7.42 0.00 0.00 3.00 12.24 0.00 0.00 24.46 4.42 12.46 13.59 6.18 21.60 6 E1a_E2a KnownJunction 0 21.11 24.47 158.36 111.11 18.68 107.04 45.75 120.59 114.93 257.10 5.05 0.00 0.00 0.00 0.00 0.00 4.39 149.73 130.26 111.86 49.85 50.03 84.85 7 I1 Intron 0 5.65 4.75 9.38 9.12 10.56 13.80 19.18 13.06 11.75 19.46 5.22 0.08 1.43 0.13 0.31 0.07 1.65 19.92 11.83 12.96 10.80 9.64 8.91 8 I1_SR1 SilentIntronRegion 0 4.96 5.20 9.06 10.52 11.02 13.30 20.11 13.43 12.30 19.37 5.23 0.00 1.48 0.17 0.34 0.11 1.49 20.20 11.79 13.62 11.74 10.03 9.77 9 I1_AR2 ActiveIntronRegion 0 5.48 1.72 11.40 9.39 7.15 12.52 12.43 14.54 7.09 27.23 4.20 0.00 0.00 0.00 0.00 0.00 10.40 44.43 23.75 14.29 20.12 10.24 6.45 10 I1_AR3 ActiveIntronRegion 0 5.61 2.98 12.51 6.74 6.44 11.43 14.26 11.71 11.03 24.44 5.18 0.00 1.23 0.00 0.00 0.00 1.80 27.58 13.14 10.94 11.43 11.53 5.99 11 I1_SR2 SilentIntronRegion 0 9.62 9.22 20.24 10.32 8.46 29.73 24.77 15.31 17.68 32.04 8.45 0.00 1.71 0.00 0.00 0.00 4.93 30.46 6.85 11.24 12.31 12.19 10.32 12 I1_AR4 ActiveIntronRegion 0 6.36 5.14 24.60 14.02 19.48 19.89 25.97 30.09 23.03 37.47 13.81 0.00 2.18 0.00 0.00 0.00 4.91 33.44 19.83 18.90 16.00 13.47 15.12 13 I1_SR3 SilentIntronRegion 0 8.90 3.66 9.71 8.92 15.36 22.14 21.43 14.27 10.96 21.10 1.81 0.59 0.00 0.00 0.00 0.00 0.65 14.18 10.79 6.02 7.23 10.07 9.51 14 I1_AR5 ActiveIntronRegion 0 6.35 6.10 6.13 1.36 14.72 7.64 9.05 11.52 6.18 15.48 1.93 0.00 0.00 0.00 0.00 0.00 0.00 9.24 3.19 6.38 8.81 12.50 10.77 15 I1_AR6 ActiveIntronRegion 0 17.02 6.98 3.68 2.60 12.76 23.17 19.63 1.99 7.84 9.73 5.04 0.00 0.00 0.00 0.00 0.00 0.00 8.86 2.20 17.25 11.32 4.31 2.54 16 ER2a ExonRegion 0 20.83 24.63 145.36 87.12 26.43 115.59 44.94 150.20 123.36 278.18 11.03 0.00 0.00 2.87 1.17 0.00 7.83 156.81 144.63 104.71 71.58 81.23 65.89 17 E2a_E3a KnownJunction 0 23.49 38.68 180.74 70.09 59.59 111.64 67.26 181.51 136.14 317.56 29.32 0.00 0.00 2.41 0.00 0.00 13.18 152.34 176.29 144.64 110.40 67.97 67.61 18 ER3a ExonRegion 0 34.46 33.93 148.29 69.84 54.88 134.67 53.07 163.29 128.84 280.85 28.96 0.00 0.00 1.17 0.00 0.00 5.96 136.99 157.82 143.19 89.77 86.59 54.20 19 E3a_E4a KnownJunction 0 30.67 38.55 132.25 77.95 55.69 154.68 75.39 138.30 126.04 263.01 18.00 0.00 0.00 0.00 0.00 0.00 8.51 113.29 115.86 137.49 93.04 87.50 87.07 20 ER4a ExonRegion 0 35.81 39.32 144.19 88.99 43.03 154.21 63.59 137.26 117.39 314.11 21.70 0.00 3.00 0.00 0.00 1.27 8.36 139.99 149.71 111.77 82.39 93.73 79.37 21 E4_Da KnownBoundary 0 16.30 5.92 23.24 15.95 24.36 11.47 12.98 34.21 16.49 56.81 2.05 0.00 0.00 0.00 0.00 0.00 0.00 21.68 17.41 15.34 15.26 11.14 8.71 22 E4a_E5a KnownJunction 0 57.64 54.99 167.71 73.05 35.99 216.64 66.20 151.69 107.75 270.93 27.01 0.00 18.51 0.00 0.00 4.27 13.37 222.52 135.53 103.55 76.48 82.79 80.75 23 ER4b ExonRegion 0 9.01 3.11 12.18 4.65 10.17 11.69 7.68 9.35 8.14 25.38 2.14 0.00 0.00 0.00 0.00 0.00 0.00 7.70 2.29 6.81 8.50 6.54 1.83 24 E4_Db NovelBoundary 0 10.37 2.83 48.99 36.16 8.40 17.55 23.94 38.20 29.98 62.16 4.84 0.00 0.00 0.00 0.00 0.00 0.00 31.79 21.55 26.08 5.68 28.66 14.85 25 I4_AR1 ActiveIntronRegion 0 5.60 5.63 18.04 14.35 10.51 10.46 9.96 22.46 19.09 37.01 2.39 0.00 0.00 0.21 0.27 0.12 0.82 20.05 11.45 9.85 9.01 8.35 5.46 26 ER5a ExonRegion 0 12.90 22.42 95.91 38.72 26.20 91.69 35.45 88.57 72.77 176.90 12.37 0.00 4.95 0.69 1.75 0.15 4.89 114.80 92.74 86.72 50.22 47.93 42.93 27 E5a_E6a KnownJunction 0 14.08 18.48 107.68 47.45 14.94 141.79 21.86 96.11 61.17 160.90 4.42 0.00 6.82 0.00 0.00 0.00 4.21 128.84 71.91 79.83 36.57 33.00 35.00 28 ER6a ExonRegion 0 17.70 17.44 76.15 36.54 25.64 102.40 40.88 106.75 63.06 182.44 9.75 0.00 3.94 0.60 1.85 0.00 6.72 113.74 83.95 73.00 51.04 55.37 37.92 29 E6a_E7a KnownJunction 0 29.56 21.11 89.23 46.81 15.87 80.24 42.35 77.63 49.45 140.41 11.00 0.00 0.00 0.00 0.00 0.00 8.23 78.80 60.43 65.90 15.26 36.56 50.71 30 ER7a ExonRegion 0 95.50 94.97 215.00 147.12 104.64 187.78 112.74 187.06 110.97 265.46 23.23 5.51 7.82 13.49 20.06 14.69 15.39 143.56 122.76 112.08 65.59 70.86 64.28 31 IG20 Intergenic 0 22.18 29.49 30.23 35.04 21.51 16.05 14.33 25.76 20.26 32.52 10.01 8.40 7.84 13.03 15.05 12.22 11.99 18.71 22.90 16.28 13.22 10.79 14.30 32 IG20_SR1 SilentIntergenicRegion 0 16.26 23.21 17.05 25.17 15.53 10.98 10.12 15.32 12.10 20.64 4.86 2.44 1.16 3.00 5.72 5.88 3.27 10.56 9.94 11.20 6.36 5.29 8.02 33 IG20_AR1 ActiveIntergenicRegion 0 11.09 31.24 11.96 36.16 9.50 7.02 17.23 32.16 11.75 23.29 2.50 3.14 3.64 6.58 5.75 7.99 4.50 6.75 13.46 11.96 11.40 16.52 0.35 34 IG20_AR2 ActiveIntergenicRegion 0 19.51 43.42 27.19 54.00 12.92 9.66 12.88 24.20 25.53 23.88 6.63 5.76 8.49 5.67 7.17 7.40 7.82 9.13 14.62 16.96 12.76 5.04 7.37 35 IG20_SR2 SilentIntergenicRegion 0 11.61 36.60 13.55 44.24 21.02 6.05 11.94 22.54 13.31 21.92 3.35 3.22 6.39 4.65 8.61 4.67 10.03 6.95 15.20 13.37 7.19 4.32 10.01 36 IG20_AR3 ActiveIntergenicRegion 0 11.10 19.63 13.77 24.84 17.49 10.74 11.65 21.49 12.50 25.29 5.70 1.87 10.26 5.50 8.38 6.78 11.70 8.22 21.44 10.51 10.76 7.48 8.22 37 IG20_AR4 ActiveIntergenicRegion 0 5.25 7.68 15.16 23.94 7.63 10.91 9.17 18.93 9.78 25.64 2.38 0.75 3.41 7.12 7.31 6.20 6.67 14.66 19.04 12.96 11.32 7.05 11.25 38 IG20_SR3 SilentIntergenicRegion 0 14.85 9.51 15.77 24.05 6.30 14.29 6.79 19.48 9.61 18.84 5.04 4.45 4.10 8.07 9.94 3.16 8.27 12.52 23.58 16.76 10.40 7.08 16.88 39 IG20_AR5 ActiveIntergenicRegion 0 11.25 8.17 9.87 23.04 5.88 6.64 5.57 11.32 7.50 22.85 5.33 5.68 7.19 4.36 1.81 3.89 2.27 13.31 14.84 8.27 6.19 2.71 10.23 40 IG20_SR4 SilentIntergenicRegion 0 9.00 17.72 8.54 11.87 15.92 10.13 9.71 7.39 7.63 9.26 2.67 3.95 3.14 4.01 4.39 5.37 3.16 6.45 10.15 7.46 5.15 3.10 5.30 41 IG20_AR6 ActiveIntergenicRegion 0 54.73 62.65 82.66 67.73 48.10 35.59 29.23 57.54 50.35 73.02 28.58 25.03 18.87 39.67 44.23 33.88 33.11 46.50 50.21 33.12 30.57 28.50 32.33