Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALC Gene 0 73.66 67.53 32.56 84.88 81.13 47.66 58.63 56.05 62.85 84.25 48.44 48.81 36.69 27.67 25.60 21.12 25.84 26.23 34.13 43.17 54.77 95.56 86.73 2 445021 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 393569 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 393568 Transcript 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 2.47 0.00 0.00 0.00 0.00 0.00 4.21 2.36 0.00 0.00 0.00 0.00 0.00 5 261304 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 457555 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 474294 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 1.57 0.44 0.00 1.79 1.98 0.00 0.58 0.60 0.67 0.00 1.12 0.00 0.00 0.00 0.90 0.00 3.96 1.62 0.00 0.94 0.00 0.00 0.00 11 E1_Da KnownBoundary 0 5.78 0.00 0.00 0.00 3.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E2a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 2.47 0.00 0.00 0.00 0.00 0.00 4.21 2.36 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 1.17 0.92 0.00 0.00 0.91 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1d ExonRegion 0 0.00 2.01 0.00 0.00 0.70 0.00 0.25 0.00 0.00 0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 1.10 0.89 0.00 0.00 17 E1_Ad KnownBoundary 0 0.00 4.93 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 18 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 3.15 0.00 0.00 19 ER1e ExonRegion 0 0.47 0.45 0.00 0.00 0.59 0.61 2.80 0.00 0.00 0.00 2.15 0.00 0.00 0.00 0.32 0.00 0.00 1.85 0.35 0.00 4.90 2.08 0.33 20 ER1f ExonRegion 0 2.85 11.41 1.79 2.39 7.91 6.83 8.17 1.32 2.85 10.60 7.62 0.19 1.07 5.47 2.85 5.22 9.78 2.56 7.05 7.24 30.83 16.60 23.78 21 E1b_E2a KnownJunction 1 7.19 24.47 1.83 10.85 4.33 2.78 0.00 6.65 16.17 31.62 36.38 5.85 0.00 24.90 18.42 4.10 51.52 4.02 18.45 12.34 86.74 53.76 100.13 22 ER2a ExonRegion 0 1.99 14.00 7.78 17.52 16.60 6.70 12.07 11.57 24.02 37.50 29.55 3.26 9.72 30.29 14.34 21.97 32.77 23.24 44.64 39.50 66.05 78.24 112.49 23 E2a_E3a KnownJunction 1 2.96 20.85 15.20 35.79 35.65 10.90 35.95 19.76 33.74 59.88 19.32 12.00 6.82 31.67 8.90 52.98 12.72 39.59 21.74 57.72 51.71 77.09 70.34 24 ER3a ExonRegion 1 4.93 31.20 8.62 33.80 90.22 116.85 73.91 24.74 37.56 64.94 51.67 14.00 16.12 25.45 6.35 29.12 42.24 56.47 25.83 40.16 92.93 56.58 89.20 25 E3a_E4a KnownJunction 0 6.89 49.46 6.36 26.67 48.47 78.99 47.17 24.89 39.87 45.69 54.28 0.00 31.49 26.72 9.64 8.54 45.07 58.78 27.20 40.91 106.50 70.11 69.23 26 ER4a ExonRegion 0 7.15 46.27 9.37 36.59 24.43 29.87 26.44 20.57 51.04 52.35 38.81 26.13 23.33 27.33 20.05 25.86 26.87 30.93 19.59 48.69 77.03 66.67 65.77 27 E4a_E5a KnownJunction 0 22.74 61.70 5.47 36.99 10.10 61.67 39.70 16.10 61.75 59.66 51.22 46.07 28.73 30.61 15.20 20.08 35.72 23.75 18.26 65.77 102.43 117.94 57.79 28 ER5a ExonRegion 0 18.49 56.65 7.86 34.39 31.10 25.04 31.00 23.78 54.88 73.11 47.11 33.37 18.73 30.36 15.83 28.49 27.16 36.07 30.06 43.37 74.67 90.87 95.48 29 E5a_E6a KnownJunction 0 18.74 82.49 12.63 58.80 60.10 18.34 47.12 28.22 58.68 91.22 42.54 29.86 33.28 36.32 30.04 39.31 39.36 33.25 32.19 43.46 64.87 108.51 147.17 30 ER6a ExonRegion 0 10.37 55.90 9.52 56.51 40.96 33.67 39.28 33.02 63.43 91.63 43.96 42.96 56.04 35.27 16.81 31.63 32.92 29.42 31.12 50.57 58.99 115.56 147.06 31 E6_Da NovelBoundary 0 0.00 10.00 0.00 1.93 4.33 0.00 2.25 6.78 0.00 1.42 9.32 31.81 20.45 7.06 0.00 0.00 0.00 0.00 4.61 0.00 2.78 2.51 3.50 32 E6a_E7a KnownJunction 0 10.08 40.72 9.08 48.61 36.33 35.26 53.26 24.03 55.87 73.04 52.22 75.02 76.46 28.08 22.25 38.20 22.53 13.22 27.58 57.14 59.49 138.82 169.28 33 I6_SR1 SilentIntronRegion 0 2.93 8.37 0.00 2.14 5.52 0.52 5.48 1.35 3.86 7.77 0.55 12.72 15.97 1.84 1.47 1.98 0.94 0.00 0.90 3.46 0.60 8.29 2.84 34 I6_AR1 ActiveIntronRegion 1 21.17 32.54 0.00 4.09 16.05 0.00 6.62 1.73 1.24 10.32 0.00 24.74 38.86 0.23 2.90 4.25 0.00 0.00 0.00 5.17 0.00 14.58 2.94 35 I6_SR2 SilentIntronRegion 0 1.81 5.21 1.16 1.80 3.35 0.93 5.48 1.00 2.21 3.92 0.73 8.91 16.00 4.26 0.81 1.67 1.67 0.00 0.00 2.94 0.28 2.37 1.65 36 I6_AR6 ActiveIntronRegion 0 10.65 2.58 1.64 4.89 9.77 1.24 9.03 4.01 1.63 5.84 13.37 10.58 9.18 8.78 2.91 7.20 7.94 1.17 1.62 3.25 7.26 6.35 3.97 37 I6_SR6 SilentIntronRegion 0 7.31 2.75 1.24 3.56 3.88 2.13 6.37 3.97 4.97 5.73 8.66 13.80 12.93 8.54 1.91 2.97 4.64 1.26 0.67 2.25 3.77 6.62 2.50 38 I6_AR7 ActiveIntronRegion 0 4.98 5.79 0.00 1.59 14.92 3.61 6.25 2.09 0.72 0.67 9.13 3.63 3.75 10.71 2.75 7.00 4.34 1.81 0.00 1.67 4.32 1.63 2.30 39 E7_Aa NovelBoundary 0 10.67 2.83 0.00 15.48 16.04 4.43 19.61 12.86 8.30 5.75 2.11 11.25 5.84 17.36 15.95 7.43 4.68 0.00 0.00 2.68 3.15 16.84 4.35 40 ER7a ExonRegion 0 18.32 61.57 11.34 56.42 48.98 47.82 48.31 39.31 61.53 82.78 67.93 85.04 59.32 40.58 14.82 34.26 40.37 28.62 39.05 53.16 67.76 118.24 151.00 41 E7a_E8a KnownJunction 0 9.56 41.24 16.20 49.14 52.46 23.74 42.26 35.73 40.94 63.39 64.65 94.68 26.95 37.50 4.45 26.66 20.57 15.25 22.59 36.56 71.91 57.80 86.05 42 ER8a ExonRegion 0 31.44 59.59 10.43 54.17 54.80 34.27 47.02 35.89 60.88 75.78 75.07 82.73 42.90 39.91 18.26 36.18 47.12 37.16 48.07 57.58 90.76 105.18 135.25 43 E8a_E9a KnownJunction 0 50.97 78.54 16.88 59.40 60.95 21.58 77.99 37.13 74.19 94.26 72.39 106.23 47.07 46.85 10.75 43.24 46.84 50.08 38.97 76.32 77.65 75.99 150.92 44 ER9a ExonRegion 0 29.83 49.38 20.14 47.19 37.44 27.01 43.00 27.72 59.73 86.94 59.66 61.89 32.42 32.22 18.54 36.90 50.25 51.91 41.21 52.65 85.96 91.59 121.65 45 E9a_E10a KnownJunction 1 15.11 86.89 17.42 62.93 30.81 36.12 54.85 54.83 61.60 120.31 92.34 68.57 12.99 32.43 18.54 17.52 51.99 65.16 40.38 72.93 81.24 122.96 128.90 46 ER10a ExonRegion 0 25.46 58.75 24.91 63.66 53.79 52.09 45.95 43.13 68.34 84.85 78.21 58.45 33.27 39.60 20.81 31.04 43.84 71.15 49.52 81.63 95.45 112.92 123.41 47 E10_Da KnownBoundary 0 7.56 3.09 0.00 0.00 0.00 0.00 4.37 4.07 2.31 1.32 0.00 0.00 0.00 0.00 4.45 3.25 0.00 0.00 0.00 3.26 0.00 0.00 0.00 48 E10a_E11a KnownJunction 0 34.97 50.78 27.32 74.25 88.20 81.09 66.69 42.68 82.06 110.72 93.97 49.37 47.24 30.55 25.59 43.83 45.72 87.59 25.51 62.45 50.10 88.11 153.57 49 ER10b ExonRegion 0 1.95 0.52 0.00 0.00 0.00 1.34 2.88 1.02 0.22 0.33 1.56 0.00 0.00 0.00 3.18 0.33 0.00 0.00 0.00 2.20 0.00 1.55 0.00 50 ER10c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER11a ExonRegion 0 36.22 74.93 26.70 90.98 62.29 38.96 58.56 51.87 73.38 87.95 74.27 44.79 66.29 43.31 26.56 34.21 38.03 69.33 55.21 74.85 66.63 136.84 169.28 52 E11a_E12a KnownJunction 0 36.52 102.09 31.37 121.50 85.82 44.07 76.67 45.55 73.61 85.10 67.02 79.83 50.65 54.98 28.06 20.85 46.00 42.74 75.01 105.91 71.17 96.01 153.06 53 ER12a ExonRegion 0 38.34 89.43 30.35 73.36 64.93 34.63 55.47 43.21 66.01 88.52 76.92 78.33 63.61 50.24 22.34 24.70 39.04 48.68 41.23 59.43 106.97 117.52 99.34 54 E12a_E13a KnownJunction 0 58.60 69.99 27.44 78.98 68.42 41.45 89.92 56.44 55.35 77.15 67.28 55.52 55.68 26.37 5.19 21.19 16.36 74.62 36.33 43.91 104.71 74.58 67.69 55 ER13a ExonRegion 0 36.63 78.96 30.18 73.97 54.44 53.88 63.06 54.07 70.28 82.30 58.06 58.40 68.27 49.71 27.15 34.82 39.63 73.91 47.11 57.09 113.67 113.52 136.37 56 E13a_E14a KnownJunction 0 30.82 73.34 20.14 94.46 83.87 39.86 68.01 56.31 83.82 104.14 71.44 73.82 47.72 60.22 39.56 31.10 39.74 54.01 59.86 53.43 97.98 133.55 121.64 57 ER14a ExonRegion 0 41.21 75.35 20.53 68.69 77.48 47.30 61.47 36.64 57.06 68.41 55.98 46.86 60.94 43.45 21.53 26.98 31.97 35.06 35.88 56.73 77.86 80.76 108.66 58 E14a_E15a KnownJunction 0 52.68 85.31 15.91 58.20 28.69 35.66 68.54 34.67 57.20 72.26 59.65 23.71 72.07 23.49 30.66 14.27 16.92 24.33 34.45 70.18 41.27 72.32 91.77 59 ER15a ExonRegion 0 52.54 64.85 20.42 68.92 80.45 54.81 64.14 51.22 56.30 82.71 59.63 45.64 45.07 35.89 23.56 18.76 31.76 18.65 37.84 54.67 45.43 74.84 92.16 60 E15a_E16a KnownJunction 0 70.75 87.35 35.72 83.87 56.37 37.48 107.05 62.39 62.30 77.09 67.60 24.46 17.69 25.78 18.42 26.66 45.72 24.95 41.70 35.41 37.62 96.99 78.36 61 ER16a ExonRegion 0 75.89 82.82 26.35 76.41 87.81 59.66 84.94 59.33 65.54 81.39 63.11 29.74 28.32 33.62 26.64 30.61 42.48 28.32 68.46 57.97 57.41 110.05 104.73 62 E16a_E17a KnownJunction 0 74.68 74.99 19.40 77.61 103.31 32.48 51.36 74.47 81.63 78.44 66.70 24.46 19.80 31.31 10.38 42.47 49.46 34.03 61.84 71.14 95.94 76.11 52.75 63 ER17a ExonRegion 0 139.07 95.32 57.30 139.45 132.49 67.78 85.75 92.42 88.43 120.45 54.11 64.13 43.55 27.47 39.27 20.16 22.90 20.00 39.40 45.82 48.36 126.50 88.23 64 ER17b ExonRegion 0 4.23 1.02 0.00 1.36 1.34 0.00 1.32 1.73 1.85 1.72 3.87 0.00 0.00 0.00 2.90 2.97 0.00 0.00 0.00 2.13 0.00 4.17 0.00 65 IG23_SR17 SilentIntergenicRegion 0 11.16 0.67 2.45 0.00 6.86 0.67 0.00 1.13 5.03 0.88 4.85 6.45 2.47 6.88 2.90 13.35 1.86 1.68 0.00 3.09 0.00 3.86 0.00 66 IG23_AR20 ActiveIntergenicRegion 0 1.10 0.00 0.00 0.50 0.00 0.00 0.98 1.73 0.87 0.00 1.07 0.00 23.28 3.55 0.43 2.64 19.19 0.00 0.00 4.73 0.00 0.00 0.00 67 IG23_AR19 ActiveIntergenicRegion 0 7.56 0.00 0.38 0.20 1.41 0.19 1.40 0.96 1.49 0.00 7.03 3.84 8.05 8.09 6.25 22.52 14.29 0.48 0.00 2.18 0.00 0.00 0.00 68 IG23_AR16 ActiveIntergenicRegion 0 19.47 0.24 0.44 1.39 4.63 0.44 1.51 0.93 0.72 0.35 0.93 1.38 3.25 0.59 2.84 3.43 2.38 0.66 0.00 1.02 0.00 0.00 0.00 69 IG23_SR4 SilentIntergenicRegion 0 3.82 3.12 0.04 0.23 1.74 1.00 1.11 1.32 3.29 0.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.35 0.43 9.39 4.93 70 IG23_AR4 ActiveIntergenicRegion 0 5.81 2.21 0.04 0.00 0.95 1.17 4.56 1.48 6.74 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 2.27 15.31 15.46 71 IG23_SR3 SilentIntergenicRegion 0 3.83 4.63 0.00 0.00 1.04 2.09 2.78 1.58 3.58 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.77 11.72 7.90 72 IG23_AR3 ActiveIntergenicRegion 0 3.96 1.03 0.76 0.05 1.28 1.63 1.01 1.70 4.54 0.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.67 0.69 17.23 9.03 73 IG23_SR2 SilentIntergenicRegion 0 3.93 1.08 0.37 0.43 3.32 1.45 1.05 0.31 5.69 1.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.01 3.01 27.22 18.85 74 IG23_AR2 ActiveIntergenicRegion 0 6.64 2.73 0.00 0.43 1.64 3.17 2.40 0.29 6.09 2.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.35 2.45 31.15 28.57 75 IG23_SR1 SilentIntergenicRegion 0 9.92 6.79 0.00 1.53 2.25 1.03 3.44 0.68 9.88 2.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.99 55.30 18.64 76 IG23_AR1 ActiveIntergenicRegion 0 7.71 5.82 0.00 1.71 2.33 6.39 2.01 0.68 6.97 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 1.92 24.72 17.49