Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ANGEL1 Gene 0 61.55 50.58 59.31 62.01 50.58 48.03 34.64 53.42 55.22 94.46 70.15 33.18 37.49 86.29 81.47 71.12 67.40 54.33 67.05 41.30 84.43 59.97 53.83 2 414937 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 251089 Transcript 0 39.34 43.69 45.38 49.49 46.38 48.19 28.39 46.78 59.64 88.93 69.55 31.74 40.69 91.80 89.17 66.51 74.22 54.17 60.89 44.59 87.68 57.71 52.22 4 ER1a ExonRegion 0 3.09 4.78 2.68 3.17 3.81 12.42 5.89 2.00 2.32 5.68 6.40 1.27 0.98 15.50 17.54 5.19 18.78 3.52 6.37 8.57 17.80 5.33 8.79 5 E1a_E2a KnownJunction 0 7.26 6.31 8.54 9.06 8.66 5.17 6.54 5.54 11.55 18.45 10.11 6.30 13.15 7.59 19.66 0.00 4.77 9.37 4.14 6.52 17.17 2.27 4.18 6 ER2a ExonRegion 0 3.52 12.01 15.83 18.28 10.20 18.21 9.12 17.03 18.20 41.69 41.04 6.20 9.91 53.38 39.74 35.02 44.39 37.27 26.59 32.56 71.43 25.08 33.73 7 E2_Da KnownBoundary 0 10.15 33.88 12.86 25.40 10.87 10.96 14.49 7.97 26.68 56.11 53.65 6.30 37.98 69.57 23.61 48.02 40.11 37.18 43.20 24.99 75.68 39.25 29.54 8 E2a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2b ExonRegion 0 8.88 16.40 18.49 26.29 13.09 15.83 13.54 25.21 25.60 59.16 37.92 3.67 5.94 71.83 60.35 45.12 50.57 41.67 38.42 32.23 74.43 40.24 39.78 10 E2b_E3a KnownJunction 0 11.34 44.27 30.19 26.84 55.18 30.10 30.07 35.49 42.53 77.74 52.28 5.85 6.82 117.14 58.10 68.10 91.26 42.12 60.05 55.86 79.57 44.33 92.45 11 ER3a ExonRegion 0 17.44 28.31 36.12 34.30 30.40 35.69 20.01 26.50 39.99 67.75 53.27 16.29 20.81 101.38 48.46 63.97 61.20 51.28 58.23 37.85 89.57 45.94 57.32 12 E3a_E4a KnownJunction 1 32.01 31.64 38.79 43.98 35.31 51.90 16.83 22.84 43.11 58.16 66.33 25.21 25.65 110.78 38.69 73.23 90.23 37.14 60.43 49.41 102.80 60.50 63.08 13 ER4a ExonRegion 1 10.19 36.69 35.82 36.37 48.13 42.81 24.76 31.14 36.75 62.65 69.50 32.72 29.68 103.27 38.38 60.63 74.32 38.35 44.96 43.92 121.30 65.84 65.45 14 E4a_E5a KnownJunction 0 9.85 27.63 43.85 42.35 39.39 29.81 22.30 35.86 40.62 77.50 64.33 36.61 25.97 94.24 65.39 66.05 48.53 39.21 13.37 38.61 88.09 54.80 49.17 15 ER5a ExonRegion 0 12.39 27.00 36.25 40.86 26.59 34.31 26.97 24.40 43.47 67.81 52.86 25.85 24.92 85.57 71.54 53.04 60.04 46.01 57.13 39.38 90.13 56.87 51.42 16 E5_Da NovelBoundary 0 3.70 19.67 1.83 27.27 51.53 18.91 40.67 22.71 26.71 34.54 27.38 6.30 0.00 19.13 41.91 35.63 29.55 3.44 18.07 17.77 32.80 5.20 36.79 17 E5a_E6a KnownJunction 0 3.70 6.71 33.77 0.00 12.56 15.73 11.17 8.87 24.65 23.67 32.59 5.70 0.00 65.40 57.48 20.25 41.70 25.78 23.06 8.44 30.09 34.72 3.33 18 I5 Intron 0 30.62 47.29 24.13 46.13 46.03 33.47 28.01 30.82 34.46 43.56 21.23 28.26 45.21 31.78 22.50 22.20 17.96 12.46 25.08 22.08 17.27 29.37 28.08 19 I5_SR1 SilentIntronRegion 0 4.42 25.43 9.64 30.81 28.43 16.19 21.51 18.67 25.62 32.34 17.94 17.06 50.30 36.85 24.29 28.92 20.25 10.53 25.03 20.84 19.77 19.47 32.59 20 I5_AR1 ActiveIntronRegion 1 6.05 36.76 10.13 23.93 31.50 21.02 22.42 10.57 17.57 20.42 8.33 32.45 62.23 23.34 16.41 7.93 10.53 6.13 8.67 16.31 3.33 19.03 15.01 21 I5_SR2 SilentIntronRegion 0 8.39 40.04 18.42 36.03 35.79 15.94 20.35 14.69 22.75 18.33 13.38 24.75 31.78 31.73 20.12 10.29 8.21 8.78 17.19 14.93 8.18 17.18 20.38 22 I5_SR3 SilentIntronRegion 0 35.50 32.28 18.88 28.08 27.72 33.21 24.19 23.90 22.63 36.14 21.99 17.28 28.06 37.33 14.66 30.02 11.30 14.88 22.87 17.12 27.00 27.12 33.63 23 I5_AR3 ActiveIntronRegion 0 70.20 71.81 43.98 76.57 73.31 59.94 39.99 59.85 58.30 79.48 34.98 35.89 44.89 33.14 28.33 32.84 28.56 18.84 39.95 31.49 27.63 48.18 37.03 24 E6_Aa NovelBoundary 1 53.27 65.12 51.86 70.35 61.80 49.69 42.22 38.77 37.47 57.05 24.43 60.47 25.97 26.61 37.83 17.43 16.92 26.78 26.26 31.00 28.11 29.76 32.52 25 ER6a ExonRegion 0 41.91 36.99 46.89 41.35 45.91 48.91 27.53 47.66 48.09 76.12 60.48 58.46 77.85 72.25 93.62 62.88 58.43 55.04 59.69 37.80 77.96 53.58 38.18 26 E6a_E7a KnownJunction 0 62.83 87.75 50.00 62.66 85.31 88.02 42.22 56.19 60.65 107.26 94.08 54.77 64.93 101.30 170.59 126.55 64.70 83.53 67.11 60.59 72.96 66.74 61.03 27 ER7a ExonRegion 0 38.50 63.39 48.41 62.59 41.73 47.32 31.51 62.16 69.08 92.42 78.41 41.58 50.75 91.05 110.54 96.31 84.28 75.54 84.23 47.48 91.34 65.64 53.84 28 E7a_E8a KnownJunction 0 73.64 48.74 53.43 46.48 48.81 49.63 33.56 49.82 69.41 96.57 64.86 38.86 66.23 81.46 106.19 62.21 86.96 58.78 56.66 31.19 70.61 64.23 56.77 29 ER8a ExonRegion 0 67.21 52.26 51.08 53.48 68.46 55.80 31.09 67.41 84.59 108.71 88.14 43.54 48.31 83.13 112.98 52.52 85.59 52.77 57.06 50.79 98.29 57.51 46.57 30 E8a_E9a KnownJunction 1 70.16 69.00 54.58 65.63 73.85 66.27 45.05 81.70 98.15 130.58 78.23 37.36 54.38 90.77 146.36 40.59 110.71 48.79 75.77 61.36 93.04 53.03 39.35 31 ER9a ExonRegion 0 57.86 41.50 57.14 75.22 76.31 73.34 43.48 73.35 93.70 132.23 94.51 39.04 72.72 106.58 131.71 80.05 99.13 81.50 95.31 62.87 106.13 73.70 61.42 32 E9_Da NovelBoundary 0 34.01 30.39 18.69 20.11 8.40 9.31 5.21 14.05 10.04 16.87 2.47 0.00 0.00 0.00 22.25 15.12 9.54 23.42 12.14 25.25 11.55 7.84 4.35 33 E9a_E10a KnownJunction 0 35.93 52.75 33.41 61.50 37.27 78.25 13.73 56.56 94.39 108.63 90.60 24.01 46.91 72.28 82.70 50.59 70.50 67.61 65.41 49.22 104.65 50.52 34.57 34 I9_SR1 SilentIntronRegion 0 7.46 18.38 7.55 10.27 13.52 5.34 7.10 8.29 5.92 9.42 3.55 2.96 6.17 4.99 3.55 5.46 5.06 8.02 16.59 8.47 4.73 3.83 5.40 35 I9_AR1 ActiveIntronRegion 0 15.74 7.00 7.87 9.24 9.79 3.81 8.82 10.15 5.81 10.57 1.27 0.83 1.62 2.34 3.80 2.58 3.06 6.38 9.60 7.11 5.02 3.87 3.40 36 E10_Aa NovelBoundary 0 11.04 12.30 17.12 6.46 19.86 10.05 15.59 13.92 6.13 9.05 9.84 0.00 8.28 4.24 4.94 3.59 9.44 3.98 8.00 21.73 6.05 6.06 11.35 37 ER10a ExonRegion 0 47.39 39.11 60.23 83.70 22.16 39.92 28.18 60.92 91.44 132.66 87.37 36.35 66.63 107.41 117.03 85.03 83.03 69.05 97.41 51.01 99.93 76.62 63.17 38 E10_Ab KnownBoundary 0 20.08 52.49 45.21 53.11 30.73 10.22 43.90 31.71 67.85 93.56 53.96 24.46 81.33 66.57 73.06 46.14 44.51 24.17 70.40 49.15 95.38 42.86 7.68 39 ER10b ExonRegion 1 59.96 67.53 62.29 80.88 85.22 45.16 44.44 64.29 77.13 119.86 94.97 22.81 74.41 82.51 88.25 88.05 87.79 82.35 103.45 41.41 81.80 68.17 61.28 40 E10_Da KnownBoundary 0 267.01 145.43 81.31 122.86 183.62 167.86 103.47 102.52 108.94 169.02 179.15 44.56 81.81 135.91 138.58 178.16 157.92 144.55 286.78 85.97 162.35 167.78 184.47 41 ER10c ExonRegion 0 106.88 76.23 88.39 87.24 74.41 63.84 48.94 75.98 67.30 121.18 86.21 45.36 43.96 96.50 94.93 90.05 74.73 60.91 81.69 44.59 87.44 73.94 62.98 42 IG20 Intergenic 0 22.18 29.49 30.23 35.04 21.51 16.05 14.33 25.76 20.26 32.52 10.01 8.40 7.84 13.03 15.05 12.22 11.99 18.71 22.90 16.28 13.22 10.79 14.30 43 IG20_AR6 ActiveIntergenicRegion 0 54.73 62.65 82.66 67.73 48.10 35.59 29.23 57.54 50.35 73.02 28.58 25.03 18.87 39.67 44.23 33.88 33.11 46.50 50.21 33.12 30.57 28.50 32.33 44 IG20_SR4 SilentIntergenicRegion 0 9.00 17.72 8.54 11.87 15.92 10.13 9.71 7.39 7.63 9.26 2.67 3.95 3.14 4.01 4.39 5.37 3.16 6.45 10.15 7.46 5.15 3.10 5.30 45 IG20_AR5 ActiveIntergenicRegion 0 11.25 8.17 9.87 23.04 5.88 6.64 5.57 11.32 7.50 22.85 5.33 5.68 7.19 4.36 1.81 3.89 2.27 13.31 14.84 8.27 6.19 2.71 10.23 46 IG20_SR3 SilentIntergenicRegion 0 14.85 9.51 15.77 24.05 6.30 14.29 6.79 19.48 9.61 18.84 5.04 4.45 4.10 8.07 9.94 3.16 8.27 12.52 23.58 16.76 10.40 7.08 16.88 47 IG20_AR4 ActiveIntergenicRegion 0 5.25 7.68 15.16 23.94 7.63 10.91 9.17 18.93 9.78 25.64 2.38 0.75 3.41 7.12 7.31 6.20 6.67 14.66 19.04 12.96 11.32 7.05 11.25 48 IG20_AR3 ActiveIntergenicRegion 0 11.10 19.63 13.77 24.84 17.49 10.74 11.65 21.49 12.50 25.29 5.70 1.87 10.26 5.50 8.38 6.78 11.70 8.22 21.44 10.51 10.76 7.48 8.22 49 IG20_SR2 SilentIntergenicRegion 0 11.61 36.60 13.55 44.24 21.02 6.05 11.94 22.54 13.31 21.92 3.35 3.22 6.39 4.65 8.61 4.67 10.03 6.95 15.20 13.37 7.19 4.32 10.01 50 IG20_AR2 ActiveIntergenicRegion 0 19.51 43.42 27.19 54.00 12.92 9.66 12.88 24.20 25.53 23.88 6.63 5.76 8.49 5.67 7.17 7.40 7.82 9.13 14.62 16.96 12.76 5.04 7.37 51 IG20_AR1 ActiveIntergenicRegion 0 11.09 31.24 11.96 36.16 9.50 7.02 17.23 32.16 11.75 23.29 2.50 3.14 3.64 6.58 5.75 7.99 4.50 6.75 13.46 11.96 11.40 16.52 0.35 52 IG20_SR1 SilentIntergenicRegion 0 16.26 23.21 17.05 25.17 15.53 10.98 10.12 15.32 12.10 20.64 4.86 2.44 1.16 3.00 5.72 5.88 3.27 10.56 9.94 11.20 6.36 5.29 8.02