Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLHDC1 Gene 0 34.42 34.96 23.74 46.61 50.31 24.64 17.64 35.15 58.43 28.83 0.66 12.33 16.44 8.37 4.68 5.52 2.94 4.60 6.70 18.99 9.35 31.78 13.75 2 359332 Transcript 0 20.13 18.11 17.12 33.61 31.82 20.03 16.35 21.78 49.39 21.79 0.81 8.88 16.19 10.09 4.28 7.63 3.50 5.73 8.92 23.24 14.69 20.75 17.19 3 ER1a ExonRegion 0 4.64 2.27 2.00 3.06 4.30 12.80 2.57 2.07 8.25 5.39 0.92 0.84 1.39 3.17 1.68 8.15 1.88 3.05 4.52 5.65 14.12 3.45 14.51 4 E1_Da NovelBoundary 0 0.00 0.00 1.69 2.86 0.00 0.00 2.25 4.39 3.21 17.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 4.61 5.62 14.83 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 4.79 7.81 2.90 0.00 4.85 12.01 2.69 2.32 0.00 6.82 4.83 0.00 0.00 0.00 4.31 0.00 5.56 5.87 0.00 8.71 6 I1_AR1 ActiveIntronRegion 0 1.25 0.25 5.26 7.77 0.97 1.77 2.72 7.37 7.28 8.01 0.00 0.43 3.43 1.81 1.24 2.84 2.93 5.33 1.92 3.84 4.72 1.51 10.58 7 I1_AR2 ActiveIntronRegion 0 6.33 6.35 5.25 14.84 14.62 3.82 5.17 14.74 24.43 11.36 0.00 1.95 4.13 0.91 0.00 1.16 0.00 1.20 1.24 7.20 2.59 2.17 5.74 8 I1_SR3 SilentIntronRegion 0 7.11 9.81 9.31 15.39 16.41 1.34 9.67 12.04 21.79 9.97 0.00 4.61 7.62 0.34 1.62 1.74 0.96 0.27 1.40 4.97 1.93 2.44 4.71 9 E2_Aa NovelBoundary 0 3.78 5.79 12.68 21.28 31.66 21.64 5.83 22.39 30.76 12.06 0.00 5.40 6.66 0.00 4.45 0.00 0.00 0.00 3.67 8.56 0.00 2.76 12.89 10 ER2a ExonRegion 0 6.35 10.17 0.28 15.70 15.64 4.49 5.41 7.21 29.40 8.00 0.65 2.07 15.59 10.00 4.54 11.68 6.56 11.74 17.81 18.22 19.90 20.78 18.53 11 E2_Da NovelBoundary 0 0.00 14.21 3.43 16.08 15.20 2.21 3.89 16.47 33.30 6.93 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 15.28 3.15 8.70 0.00 12 E2a_E3a KnownJunction 0 6.00 12.63 1.39 22.64 0.00 8.12 9.80 11.09 30.56 12.76 2.16 5.85 0.00 6.30 0.00 15.12 3.65 11.61 13.27 25.82 10.32 21.06 30.82 13 I2 Intron 0 2.78 4.90 2.20 10.22 13.76 7.43 7.82 10.43 23.17 6.36 0.00 1.51 5.59 0.44 1.48 2.60 2.53 1.01 2.09 6.05 4.82 1.37 4.50 14 I2_SR1 SilentIntronRegion 0 2.79 4.92 2.21 10.27 13.82 7.46 7.86 10.48 23.26 6.39 0.00 1.51 5.61 0.44 1.48 2.61 2.54 1.01 2.10 6.08 4.84 1.37 4.52 15 E3_Aa NovelBoundary 0 0.00 17.76 6.15 22.81 4.33 0.00 6.58 16.06 33.01 6.26 0.00 0.00 6.49 0.00 0.00 3.93 0.00 0.00 4.33 0.00 3.15 0.00 7.68 16 ER3a ExonRegion 0 5.81 5.89 9.82 23.55 16.46 17.95 8.57 12.29 41.59 19.62 1.49 4.92 7.95 5.19 2.73 10.07 5.93 5.61 13.01 16.68 13.97 16.81 21.38 17 E3_Da NovelBoundary 0 3.56 0.00 4.82 6.89 31.41 4.88 3.36 17.25 29.31 6.53 0.00 6.30 6.49 0.00 0.00 0.00 0.00 0.00 11.58 3.26 11.31 5.88 3.33 18 E3a_E4a KnownJunction 0 10.15 6.58 9.88 17.95 16.81 24.87 8.48 11.91 34.32 16.65 0.00 0.00 6.82 0.00 0.00 4.02 0.00 1.70 8.56 9.78 11.55 19.53 15.88 19 I3 Intron 0 4.95 7.14 4.91 10.22 10.33 4.29 6.97 10.55 19.59 8.40 0.00 4.17 8.07 1.52 0.00 1.04 0.39 0.00 1.12 3.98 2.58 2.68 2.75 20 I3_SR1 SilentIntronRegion 0 4.97 7.17 4.94 10.26 10.37 4.30 7.00 10.59 19.68 8.44 0.00 4.19 8.10 1.53 0.00 1.05 0.39 0.00 1.12 4.00 2.59 2.69 2.76 21 E4_Aa NovelBoundary 0 20.60 5.79 3.05 15.68 8.40 13.91 4.50 13.14 31.19 4.54 0.00 18.01 7.47 0.00 0.00 0.00 4.77 0.00 7.81 6.20 0.00 2.27 4.35 22 ER4a ExonRegion 0 18.43 12.13 11.57 28.04 22.87 24.26 14.82 27.16 54.52 25.03 0.26 7.64 16.91 11.44 4.17 2.17 8.24 4.63 7.01 26.62 17.19 25.47 18.58 23 E4_Da NovelBoundary 0 0.00 0.00 0.00 11.85 14.01 0.00 0.00 10.31 21.33 7.23 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 4.14 8.69 2.78 0.00 7.43 24 E4a_E5a KnownJunction 0 13.34 8.75 19.81 15.58 11.80 19.36 13.34 19.43 62.99 18.70 2.26 0.00 27.27 14.01 4.45 0.00 3.55 2.57 9.22 28.19 3.03 16.53 8.02 25 E4a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 18.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 26 ER5a ExonRegion 0 14.25 8.42 13.17 17.51 26.93 12.47 13.49 25.03 48.12 19.67 1.86 9.97 27.96 10.51 2.20 2.71 3.18 4.02 7.10 31.83 21.70 22.60 10.93 27 E5_Da NovelBoundary 0 0.00 3.35 1.45 18.81 11.46 8.52 0.00 12.28 12.50 6.45 0.00 6.30 0.00 7.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E5a_E6a KnownJunction 0 15.63 18.55 12.45 15.52 15.96 18.46 3.75 14.46 43.63 22.54 2.16 12.75 0.00 14.24 0.00 7.09 4.39 9.08 0.00 21.73 19.95 31.78 24.58 29 I5_SR1 SilentIntronRegion 0 5.65 1.47 4.91 10.72 4.78 2.82 1.91 3.66 14.88 5.10 0.00 3.87 4.22 0.68 0.00 1.08 0.60 0.58 0.86 5.91 1.39 4.30 2.39 30 I5_SR2 SilentIntronRegion 0 5.28 7.00 1.21 11.98 8.20 3.36 5.02 10.55 7.07 4.20 0.65 0.00 2.62 1.35 0.68 4.79 2.36 1.06 3.97 7.68 8.44 7.31 2.75 31 ER6a ExonRegion 0 25.95 28.71 15.68 20.49 27.52 14.06 18.60 16.79 47.01 19.55 0.23 14.74 18.48 12.82 5.66 4.71 5.38 8.45 1.93 20.72 29.30 25.87 19.16 32 E6a_E7a KnownJunction 0 41.71 13.22 13.99 28.30 12.99 4.88 11.88 31.87 52.00 17.92 0.00 5.70 7.79 10.07 15.58 0.00 0.00 1.82 0.00 15.15 21.62 8.21 4.18 33 ER7a ExonRegion 0 20.74 22.01 15.35 26.59 26.88 16.96 12.31 14.07 50.99 19.35 0.92 11.34 13.79 7.64 2.07 5.87 6.56 6.75 4.97 25.23 29.78 20.39 11.85 34 E7a_E8a KnownJunction 0 20.89 34.86 20.61 45.82 58.49 20.05 21.11 16.35 59.37 16.79 0.00 12.60 39.12 16.60 4.45 3.67 13.46 6.05 4.24 37.26 24.83 26.94 30.82 35 ER8a ExonRegion 0 18.69 24.37 18.80 37.01 43.72 20.82 22.62 26.51 66.84 20.70 0.36 15.04 11.92 14.89 4.18 6.95 7.78 8.58 2.16 29.35 20.77 20.62 19.36 36 E8a_E9a KnownJunction 0 16.89 9.14 23.54 29.03 23.77 24.53 22.61 37.66 80.03 28.53 0.00 31.06 12.17 22.43 6.30 8.03 4.39 10.40 9.04 32.66 11.92 17.76 3.67 37 ER9a ExonRegion 0 23.73 14.54 23.79 47.16 37.27 27.57 24.59 32.47 63.23 27.91 0.00 4.90 18.80 14.40 3.29 11.36 5.14 7.87 9.75 27.77 10.02 26.53 20.56 38 E9a_E10a KnownJunction 0 24.89 29.67 34.21 72.02 74.02 20.84 38.07 30.19 64.00 34.01 0.00 0.00 12.99 16.66 5.07 11.79 4.11 6.55 18.82 25.31 8.53 17.45 43.02 39 ER10a ExonRegion 0 38.13 34.35 29.31 49.85 57.40 43.53 23.18 34.47 55.94 31.33 0.00 17.67 44.33 12.15 3.10 15.31 1.27 6.10 10.95 35.65 10.11 21.18 20.40 40 E10a_E11a KnownJunction 0 54.82 23.55 31.43 61.50 40.49 39.81 24.42 28.42 44.30 21.52 0.00 18.61 26.46 7.12 6.06 0.00 0.00 0.00 8.56 32.73 9.14 24.68 8.37 41 ER11a ExonRegion 0 36.35 18.59 29.90 55.69 59.94 19.68 23.44 28.63 57.28 31.94 2.30 9.78 34.71 16.09 4.20 11.57 0.00 3.20 5.28 21.33 12.89 24.78 14.68 42 E11a_E12a KnownJunction 0 13.34 30.13 28.47 46.81 68.00 19.36 34.58 19.92 51.42 29.47 0.00 12.30 12.99 2.24 5.07 15.89 0.00 7.05 12.89 27.36 14.21 20.39 27.66 43 ER12a ExonRegion 0 12.38 20.22 21.13 41.81 37.46 17.72 18.89 22.37 51.27 29.82 1.90 8.58 11.24 6.83 5.97 14.97 0.00 5.82 20.07 25.01 10.94 17.22 12.36 44 E12a_E13a KnownJunction 0 13.56 14.47 11.06 53.71 22.50 36.57 12.19 22.59 57.03 29.76 0.00 0.00 12.99 5.18 10.51 16.24 0.00 2.57 28.05 18.41 11.74 27.80 10.41 45 I12_AR1 ActiveIntronRegion 0 17.34 7.82 3.30 18.63 28.38 5.87 10.04 11.18 10.96 7.27 0.00 5.70 10.65 3.25 1.33 3.33 3.02 3.78 5.36 5.44 8.39 10.11 10.70 46 I12_SR2 SilentIntronRegion 0 24.12 8.85 1.23 18.17 29.06 4.90 8.93 14.49 19.20 9.08 0.50 4.86 13.54 6.07 3.15 6.77 4.31 5.09 12.91 6.14 13.93 17.03 14.30 47 I12_AR2 ActiveIntronRegion 0 9.95 3.83 2.87 9.63 14.94 2.38 6.15 5.26 11.95 3.34 0.73 4.65 7.29 2.34 1.59 1.71 0.48 1.74 2.60 4.31 2.91 9.63 5.09 48 E13_Aa NovelBoundary 0 20.23 6.71 8.75 17.75 42.28 8.46 16.30 15.32 17.45 7.63 0.00 11.85 0.00 2.47 0.00 0.00 0.00 2.11 0.00 7.67 2.66 13.53 0.00 49 ER13a ExonRegion 0 46.62 49.54 30.45 60.11 66.40 28.64 20.02 46.63 68.55 35.06 0.50 15.57 16.20 7.39 5.62 3.43 1.93 3.68 5.66 17.00 3.82 40.81 11.44