Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PRPF39	Gene	0	156.97	260.35	91.70	229.79	206.90	196.00	162.58	138.45	184.56	113.15	186.80	336.63	226.14	144.08	104.58	116.87	141.74	58.23	51.32	98.06	55.23	142.77	74.64
2	452548	Transcript	0	8.86	8.53	3.60	7.69	21.03	7.12	6.79	3.36	5.65	6.52	6.54	15.03	9.55	4.21	1.60	4.52	3.09	0.65	2.55	4.49	3.53	9.38	0.00
3	477626	Transcript	1	63.49	77.81	9.69	61.11	73.09	126.61	77.44	56.64	83.66	37.95	83.89	100.64	92.50	77.71	22.84	52.72	62.42	38.78	20.89	50.37	39.26	81.67	54.02
4	355765	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	424478	Transcript	0	18.97	80.71	15.88	54.70	44.91	108.52	53.30	49.78	96.24	27.53	67.28	43.81	61.03	49.50	18.30	57.42	48.71	31.84	19.11	46.34	24.46	60.07	18.95
6	355846	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	0.00	2.44	0.00	0.00	0.00	4.49	1.39	0.00	0.00	0.00	4.06	2.16	0.00	0.89	0.73	4.31	0.00	0.00	3.50	1.06	7.05	0.00	0.00
8	ER1b	ExonRegion	0	1.18	7.68	0.00	0.45	2.68	15.49	8.68	0.38	2.20	1.02	7.73	4.33	0.00	3.25	8.38	5.94	2.57	2.46	7.43	2.36	16.65	1.16	0.98
9	ER1c	ExonRegion	0	6.35	18.30	0.00	1.36	10.70	45.84	21.18	3.46	9.88	6.88	7.73	4.33	0.00	8.12	14.51	5.94	6.60	7.39	9.56	4.26	41.87	10.42	5.87
10	ER1d	ExonRegion	0	18.68	20.87	16.09	28.47	8.76	37.72	15.00	27.60	59.23	37.12	24.27	37.43	43.02	20.47	26.09	12.40	30.83	13.85	8.63	34.17	24.62	11.52	8.54
11	E1a_E2a	KnownJunction	1	27.78	29.21	3.64	18.78	0.00	10.33	9.80	6.33	49.45	30.81	56.86	37.51	41.56	29.25	8.90	11.88	50.49	15.50	16.00	26.08	42.07	28.66	19.63
12	ER2a	ExonRegion	0	44.78	180.45	37.00	104.26	72.88	120.95	84.30	97.08	153.07	84.28	230.55	261.23	159.05	142.16	61.97	143.78	198.98	96.74	49.92	116.95	89.21	99.18	96.86
13	E2a_E3a	KnownJunction	0	95.20	184.31	51.71	119.03	70.71	94.55	108.68	88.56	158.13	88.62	213.53	335.51	163.30	232.98	101.00	181.83	173.26	98.12	50.26	132.88	49.11	133.12	114.05
14	ER3a	ExonRegion	1	97.85	333.36	52.02	93.13	101.44	151.62	145.31	99.58	159.20	86.40	243.55	276.19	225.27	198.26	66.36	162.38	224.33	71.78	63.76	99.65	92.50	124.63	101.69
15	E3_Da	KnownBoundary	0	28.60	114.32	23.09	75.28	46.01	144.75	85.28	78.04	120.34	35.89	79.28	79.23	51.94	45.32	28.06	49.65	38.99	20.15	25.51	42.95	46.70	101.89	50.71
16	E3a_E3b	KnownJunction	0	18.97	80.71	15.88	54.70	44.91	108.52	53.30	49.78	96.24	27.53	67.28	43.81	61.03	49.50	18.30	57.42	48.71	31.84	19.11	46.34	24.46	60.07	18.95
17	E3a_E3d	KnownJunction	0	19.19	152.14	14.87	20.88	18.93	20.39	35.55	6.86	16.44	11.71	64.44	115.54	105.19	79.93	37.70	63.66	82.47	12.77	47.06	22.12	25.21	19.35	11.87
18	ER3b	ExonRegion	0	45.90	81.61	10.53	50.48	64.89	90.25	62.58	50.36	71.55	32.66	82.42	95.18	96.00	62.71	25.24	53.89	69.84	25.92	15.24	47.92	31.52	73.57	57.38
19	E3_Ab	KnownBoundary	1	62.46	44.14	6.00	79.18	46.35	46.11	94.38	82.19	99.80	48.62	65.70	100.53	103.73	45.15	4.45	26.75	92.29	37.64	0.00	67.62	50.53	41.82	49.00
20	ER3c	ExonRegion	0	61.42	104.61	29.77	118.61	130.42	189.98	117.83	87.68	138.47	74.22	167.48	148.18	157.51	143.43	52.41	160.26	144.55	103.85	53.42	100.64	96.19	117.57	119.61
21	E3_Ac	KnownBoundary	1	64.83	125.83	27.91	118.50	131.92	168.43	104.14	83.54	114.47	80.16	163.52	95.73	144.31	136.32	34.49	91.94	152.78	87.96	25.51	71.20	146.23	64.66	79.73
22	ER3d	ExonRegion	1	56.43	104.99	21.93	101.66	108.52	141.07	102.08	91.03	136.15	69.15	178.46	151.83	109.23	151.95	45.58	142.28	120.41	79.00	30.52	88.99	107.03	106.40	78.57
23	E3_Db	KnownBoundary	1	72.61	91.89	11.12	85.67	79.37	88.93	73.40	59.89	90.77	40.40	84.28	50.27	68.02	90.24	20.27	59.39	80.41	47.01	41.98	56.31	64.74	60.56	33.80
24	E3b_E3d	KnownJunction	0	10.30	50.12	5.74	33.16	20.20	80.81	23.63	14.29	41.46	18.24	62.65	65.27	62.01	68.10	40.79	75.62	62.37	33.58	8.28	9.01	30.33	26.02	33.63
25	ER3e	ExonRegion	1	81.07	74.01	8.84	71.74	81.29	162.97	92.30	62.92	95.77	43.24	85.35	106.09	89.00	92.71	20.44	51.54	54.99	51.64	26.54	52.83	47.00	89.77	50.65
26	E3_Ad	KnownBoundary	1	68.60	98.01	15.17	81.61	104.75	269.56	99.41	65.02	103.27	41.13	39.22	127.99	135.38	100.01	33.50	69.98	47.41	39.55	20.89	60.02	35.65	71.40	71.79
27	ER3f	ExonRegion	0	108.59	155.53	30.24	119.29	167.73	192.83	154.86	75.23	136.70	77.62	207.36	270.41	220.03	217.45	80.92	177.45	156.65	76.68	86.60	93.15	78.87	152.20	97.73
28	E3_Dc	NovelBoundary	0	3.78	13.68	6.50	37.26	8.40	29.70	31.31	34.58	48.38	20.79	10.16	30.91	68.66	14.19	4.45	7.86	8.32	19.23	9.51	20.96	2.72	9.31	0.00
29	E3c_E4a	KnownJunction	1	136.76	135.30	38.94	157.42	132.34	96.14	134.87	105.68	163.89	78.36	268.12	424.04	246.57	200.60	46.73	171.24	167.74	69.64	52.99	105.40	48.25	138.76	84.68
30	Ix	Intron	0	4.25	20.69	2.37	19.61	17.86	34.35	21.79	16.53	29.34	13.96	6.39	25.94	27.17	6.76	4.55	8.09	11.55	11.16	7.85	23.03	1.29	7.83	3.43
31	Ix_SR1	SilentIntronRegion	0	4.26	20.72	2.37	19.63	17.88	34.39	21.82	16.55	29.37	13.97	6.40	25.98	27.21	6.77	4.55	8.10	11.57	11.17	7.86	23.05	1.29	7.84	3.43
32	Ix	Intron	0	5.50	52.49	13.42	34.23	18.47	18.74	22.56	20.54	41.41	15.93	6.06	25.98	25.67	7.13	5.08	9.32	9.17	9.24	6.57	27.65	0.79	6.91	2.90
33	Ix_SR1	SilentIntronRegion	0	5.50	52.49	13.42	34.23	18.47	18.74	22.56	20.54	41.41	15.93	6.06	25.98	25.67	7.13	5.08	9.32	9.17	9.24	6.57	27.65	0.79	6.91	2.90
34	Ix	Intron	0	4.69	29.14	8.72	31.18	26.48	25.96	24.84	23.28	44.59	19.24	3.63	14.42	17.13	6.84	1.60	3.04	6.76	4.41	2.17	18.51	2.26	4.98	0.00
35	Ix_SR1	SilentIntronRegion	0	4.71	29.23	8.75	31.28	26.56	26.05	24.92	23.36	44.74	19.30	3.63	14.47	17.19	6.87	1.61	3.05	6.77	4.42	2.18	18.56	2.26	4.99	0.00
36	E4_Aa	NovelBoundary	0	13.56	50.06	14.40	65.79	43.80	41.85	22.92	36.76	84.61	33.28	17.27	18.91	33.60	17.60	4.45	0.00	27.30	10.99	4.80	32.92	2.78	5.88	7.60
37	ER4a	ExonRegion	0	131.34	206.17	53.84	218.53	199.93	235.35	198.29	144.72	238.61	140.00	250.46	422.28	269.48	205.51	87.87	154.36	150.15	61.66	60.58	128.38	65.49	170.70	75.92
38	E4a_E5a	KnownJunction	0	187.29	255.48	74.10	269.23	215.03	378.59	357.54	158.67	271.90	160.15	280.18	560.28	321.08	201.84	104.09	151.41	132.77	51.19	69.37	100.80	48.19	123.69	84.59
39	E4a_E6a	NovelJunction	0	0.00	11.58	1.21	1.60	0.00	0.00	2.08	7.35	6.74	0.00	2.68	0.00	0.00	2.47	0.00	16.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER5a	ExonRegion	0	166.12	239.90	81.95	260.41	248.54	288.22	216.76	167.95	279.75	170.06	251.70	531.22	350.23	204.83	112.96	140.33	188.73	60.29	64.57	147.46	54.96	173.11	84.51
41	E5a_E6a	KnownJunction	1	210.04	182.47	112.27	258.94	292.87	263.09	219.62	194.36	302.51	199.02	252.80	562.53	307.29	211.08	141.05	66.91	244.41	26.07	47.06	175.45	56.77	117.75	67.27
42	ER6a	ExonRegion	0	189.86	227.46	89.95	325.33	242.97	230.87	221.05	198.02	328.30	192.00	269.76	627.45	440.65	212.50	97.00	134.63	221.40	66.21	60.14	148.84	49.73	213.54	97.89
43	E6a_E7a	KnownJunction	0	398.07	434.20	117.53	422.79	542.02	460.08	361.12	267.23	426.67	246.16	340.77	805.91	454.68	266.76	181.96	258.05	222.07	108.07	95.44	203.45	39.85	318.72	159.46
44	ER7a	ExonRegion	0	238.08	281.79	80.06	253.17	313.29	318.10	252.51	181.52	278.00	163.22	282.27	645.59	445.18	205.91	143.04	166.20	197.57	82.33	79.77	142.42	71.73	198.40	111.68
45	E7_Da	NovelBoundary	0	119.58	78.87	35.21	163.15	141.85	96.54	81.08	59.52	128.67	60.65	121.35	197.16	142.04	49.80	23.36	73.83	56.10	16.54	32.38	71.65	11.86	64.54	24.41
46	E7a_E8a	KnownJunction	0	68.46	142.94	31.99	78.78	108.49	104.14	125.86	87.49	85.44	42.39	176.31	320.65	236.19	89.82	83.94	72.03	96.12	21.56	36.42	40.08	56.28	52.97	31.33
47	Ix	Intron	0	120.33	194.78	27.36	141.58	128.60	95.59	98.80	59.16	93.55	63.48	95.09	183.50	155.76	86.00	47.11	64.89	67.21	31.90	41.51	53.36	42.64	76.34	43.00
48	Ix_AR1	ActiveIntronRegion	0	121.09	196.02	27.54	142.49	129.42	96.20	99.42	59.53	94.14	63.87	95.69	184.68	156.75	86.53	47.40	65.29	67.62	32.10	41.78	53.70	42.91	76.82	43.28
49	E8_Aa	NovelBoundary	0	174.33	247.46	69.31	202.41	188.62	231.57	207.34	67.69	80.96	98.61	107.50	133.09	184.57	74.58	53.28	63.91	65.83	24.33	17.22	87.44	40.40	55.23	44.47
50	ER8a	ExonRegion	0	285.23	531.39	118.61	314.74	310.32	331.11	226.52	179.41	241.91	165.22	314.03	524.82	371.66	218.44	140.52	239.62	250.74	112.10	95.01	157.53	143.38	170.42	133.58
51	E8_Da	NovelBoundary	0	32.82	101.10	20.93	48.48	44.99	23.17	28.97	15.16	14.84	33.15	24.27	26.11	34.41	14.48	12.61	20.85	13.00	18.07	4.80	18.22	6.24	2.33	19.63
52	E8a_E9a	KnownJunction	0	384.14	685.21	128.11	401.48	434.30	315.27	254.16	214.04	264.81	182.07	282.02	359.22	339.59	276.77	213.24	301.46	237.21	95.72	132.99	174.75	138.20	216.77	203.51
53	ER9a	ExonRegion	0	368.91	550.62	174.53	480.70	375.98	328.26	293.43	247.53	284.28	193.90	358.85	447.87	365.07	227.62	159.20	212.38	279.36	88.05	105.29	149.62	98.93	202.81	127.76
54	E9a_E10a	KnownJunction	0	361.77	502.48	129.95	380.54	464.01	320.67	363.11	196.54	222.02	124.40	192.52	269.94	219.47	138.97	131.41	85.36	110.89	36.06	66.54	75.68	16.49	194.11	69.74
55	ER10a	ExonRegion	0	277.96	553.65	197.98	440.12	392.76	324.94	278.29	209.41	243.79	156.46	185.58	487.22	353.65	162.76	158.66	92.70	121.78	42.23	42.87	106.39	21.79	183.53	63.00
56	E10a_E11a	KnownJunction	1	341.02	388.02	245.20	491.71	397.03	182.62	271.07	237.78	255.50	172.61	181.78	549.18	382.93	108.95	191.11	54.09	170.36	27.61	32.28	106.55	19.52	123.81	93.13
57	E11_Aa	NovelBoundary	0	42.45	21.25	31.99	49.38	49.92	5.34	28.44	31.96	12.27	7.79	14.79	6.30	18.34	2.47	6.18	4.36	4.77	4.19	4.80	9.46	0.00	19.96	0.00
58	ER11a	ExonRegion	0	262.79	305.88	227.25	490.20	369.25	255.70	247.03	226.77	267.58	170.72	213.37	514.57	340.43	147.60	174.50	99.70	157.52	50.70	61.50	107.60	20.24	198.35	72.75
59	E11a_E12a	KnownJunction	1	360.06	364.47	251.82	535.66	390.49	285.80	239.23	249.98	277.72	177.13	189.68	648.81	366.86	224.97	261.57	112.28	134.92	45.81	70.68	128.79	14.21	167.47	51.90
60	Ix	Intron	0	14.64	7.91	20.52	17.99	28.91	9.91	16.59	18.94	13.52	12.93	8.35	18.27	18.24	5.78	6.42	5.14	2.85	4.18	4.13	10.12	1.43	10.81	2.54
61	Ix_SR1	SilentIntronRegion	0	14.76	7.98	20.68	18.14	29.16	9.99	16.74	19.09	13.64	13.03	8.43	18.37	18.40	5.83	6.47	5.18	2.88	4.21	4.17	10.19	1.44	10.90	2.56
62	ER12a	ExonRegion	0	269.53	259.69	237.38	428.18	364.85	287.75	221.60	233.87	291.75	154.42	196.21	459.82	278.11	153.49	197.38	91.87	150.72	53.81	44.75	108.40	20.03	168.85	49.24
63	E12_Da	KnownBoundary	0	41.04	21.18	31.19	57.87	81.92	18.51	28.79	24.97	32.44	28.37	9.53	37.96	31.98	7.36	0.00	4.19	13.00	5.89	4.80	17.51	0.00	15.31	0.00
64	E12a_E13a	KnownJunction	0	219.30	232.85	224.59	440.34	405.09	342.93	287.76	209.64	276.01	137.43	153.09	418.49	207.13	95.65	146.98	41.95	51.99	34.86	60.43	79.45	13.41	177.39	61.12
65	ER12b	ExonRegion	0	17.72	14.61	7.19	15.37	42.07	9.75	12.19	6.72	11.30	13.04	9.02	27.90	19.11	7.52	2.47	4.73	6.17	1.30	1.59	7.92	0.00	18.75	0.00
66	E12_Db	NovelBoundary	0	17.26	18.35	37.34	79.14	55.43	11.19	57.59	35.49	20.46	25.28	9.48	43.66	33.11	24.02	4.45	4.36	13.09	12.15	7.72	21.54	0.00	25.11	0.00
67	Ix	Intron	0	13.33	7.04	26.44	35.17	33.69	10.97	19.17	14.60	13.33	18.29	10.34	25.07	7.56	10.71	13.06	6.55	6.24	6.97	2.01	10.05	0.69	19.68	2.77
68	Ix_AR1	ActiveIntronRegion	0	13.49	7.13	26.77	35.61	34.12	11.11	19.41	14.78	13.49	18.52	10.47	25.38	7.65	10.84	13.22	6.63	6.31	7.06	2.03	10.17	0.70	19.92	2.81
69	E13_Aa	NovelBoundary	0	36.90	17.56	58.93	104.32	82.26	15.56	49.64	21.15	17.56	25.87	14.37	13.35	27.11	11.77	9.52	7.60	12.16	7.67	4.80	9.72	0.00	27.56	0.00
70	ER13a	ExonRegion	1	174.98	306.70	135.50	273.66	238.29	142.30	151.28	151.68	156.49	109.79	103.40	344.08	163.13	89.38	151.77	56.65	65.56	18.79	34.85	63.54	9.99	158.87	32.56
71	ER13b	ExonRegion	0	8.47	31.52	6.13	8.86	9.37	0.00	1.32	2.59	1.85	0.00	0.97	4.33	0.00	1.62	1.45	0.00	0.00	0.00	0.00	0.00	0.00	3.13	0.00