Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RHOJ Gene 0 187.18 6.16 52.32 30.49 76.62 18.83 31.55 57.41 29.31 19.35 0.18 0.86 1.12 0.71 1.26 0.78 0.36 2.54 1.18 4.83 152.69 179.06 106.45 2 316754 Transcript 0 89.88 6.62 45.04 21.19 49.86 20.85 19.02 38.75 23.19 14.31 0.11 0.52 0.67 0.43 0.75 0.47 0.21 2.85 0.50 3.08 139.23 166.43 104.84 3 456407 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG28_AR4 ActiveIntergenicRegion 0 1.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.76 0.88 0.58 10.49 1.73 3.67 5 ER1a ExonRegion 0 6.03 4.07 0.00 0.00 1.07 3.67 0.00 0.00 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.28 20.21 16.45 6 ER1b ExonRegion 0 57.35 3.30 29.35 15.18 39.26 20.24 16.25 32.40 23.91 13.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.77 0.52 3.86 197.88 140.74 103.70 7 E1a_E2a KnownJunction 0 61.42 8.75 67.00 24.97 37.10 11.41 20.89 28.26 16.64 21.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 195.28 148.80 86.30 8 ER2a ExonRegion 0 65.11 5.86 48.10 26.80 28.98 9.64 14.11 30.88 17.27 15.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 1.69 221.27 123.39 94.62 9 E2a_E3a KnownJunction 0 109.65 8.02 34.86 26.04 43.72 25.27 18.72 41.20 18.20 18.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.61 0.00 0.00 221.29 172.00 132.65 10 ER3a ExonRegion 0 66.85 5.03 60.03 27.57 63.60 27.12 17.79 41.64 25.88 26.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.97 0.00 2.60 248.26 164.77 150.72 11 E3_Da KnownBoundary 0 64.09 3.22 53.61 31.06 66.38 25.55 11.00 56.56 26.79 11.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.34 0.00 3.20 207.94 154.80 98.59 12 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3b ExonRegion 0 67.09 3.88 60.27 27.67 43.78 31.06 15.00 48.89 31.79 17.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.61 0.00 3.64 220.74 226.09 160.63 14 E3b_E4a KnownJunction 0 82.68 11.97 77.55 30.40 80.98 35.38 29.77 53.72 37.85 24.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 0.00 3.20 242.48 281.74 159.97 15 ER4a ExonRegion 0 101.68 8.09 60.64 28.82 55.16 14.61 32.22 46.88 26.94 18.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.62 0.00 3.86 262.61 193.64 124.93 16 E4a_E5a KnownJunction 0 108.17 5.85 52.10 11.02 75.55 2.61 21.82 48.30 32.46 18.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 229.56 107.89 63.00 17 I4 Intron 0 21.39 0.71 1.81 3.61 12.56 2.91 7.20 7.36 4.53 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.06 2.07 18.45 43.00 22.81 18 I4_SR1 SilentIntronRegion 0 8.48 0.19 0.47 2.68 6.27 1.63 4.42 3.74 4.29 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.03 0.10 2.36 20.57 35.67 24.04 19 I4_AR2 ActiveIntronRegion 0 7.23 0.80 0.89 1.29 8.47 1.82 5.96 10.43 5.86 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.96 0.00 4.35 19.16 47.46 24.74 20 I4_SR2 SilentIntronRegion 0 14.11 0.48 1.23 1.36 18.99 4.28 2.96 22.39 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 3.85 4.62 49.91 13.70 21 I4_AR4 ActiveIntronRegion 0 23.59 1.12 2.38 3.97 15.01 3.90 9.22 8.19 5.16 3.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.83 0.08 1.97 21.36 46.24 25.82 22 I4_SR4 SilentIntronRegion 0 26.31 0.44 1.96 4.79 22.93 2.36 7.66 4.97 0.79 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.46 2.36 33.04 12.59 23 I4_AR5 ActiveIntronRegion 0 83.99 1.94 5.73 11.08 27.73 6.00 14.62 16.86 5.02 5.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 3.91 84.66 17.22 24 I4_SR5 SilentIntronRegion 0 70.86 0.00 7.82 4.74 31.25 2.14 8.76 9.02 5.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.83 30.01 39.75 20.58 25 E5_Aa NovelBoundary 0 114.39 0.00 10.05 14.02 25.55 2.84 12.19 14.70 7.35 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.14 0.00 55.54 55.17 31.58 26 ER5a ExonRegion 0 287.39 7.57 80.51 47.30 115.18 25.49 45.97 86.73 44.52 28.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.50 0.84 5.24 208.63 266.36 135.23 27 E5_Da KnownBoundary 0 178.03 0.00 77.14 70.45 54.33 21.81 39.04 83.79 43.34 30.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.70 101.62 421.47 138.80 28 ER5b ExonRegion 0 203.70 6.55 42.36 26.68 73.59 13.27 31.29 52.39 22.31 15.71 0.43 2.06 2.70 1.70 3.01 1.87 0.86 1.84 2.00 5.48 74.43 137.68 82.31 29 IG29_AR1 ActiveIntergenicRegion 0 16.78 2.13 5.81 2.81 10.78 2.88 3.86 5.53 3.10 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.11 18.69 15.94 8.50 30 IG29_SR1 SilentIntergenicRegion 0 9.59 1.37 3.71 0.74 4.28 0.00 5.00 4.27 2.72 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 6.82 10.96 6.14 31 IG29_AR2 ActiveIntergenicRegion 0 9.24 1.70 7.15 3.73 5.64 2.17 4.43 5.62 2.92 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.99 2.36 14.07 7.81 32 IG29_SR2 SilentIntergenicRegion 0 6.91 0.87 5.02 4.37 5.62 4.08 1.84 5.14 2.47 3.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.65 8.08 8.03 6.01 33 IG29_AR3 ActiveIntergenicRegion 0 6.06 1.31 5.35 1.97 4.93 2.74 3.87 6.25 2.02 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 7.38 16.28 6.76 34 IG29_SR3 SilentIntergenicRegion 0 3.74 0.05 3.49 1.67 8.13 1.73 2.74 3.05 2.66 2.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.35 0.59 9.38 10.01 6.14 35 IG29_AR4 ActiveIntergenicRegion 0 2.84 0.29 3.21 1.57 5.44 0.13 2.25 2.65 1.17 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.00 0.60 4.18 8.47 1.41 36 IG29_AR5 ActiveIntergenicRegion 0 30.84 0.00 1.34 3.53 9.17 1.25 2.77 5.60 2.83 3.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.58 13.70 7.71