Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA0831 Gene 0 67.04 64.08 50.33 93.04 113.79 83.19 51.89 78.13 119.70 56.88 47.38 47.55 63.20 44.04 39.31 48.53 42.53 34.17 36.35 34.94 66.30 68.61 52.43 2 247178 Transcript 0 33.81 51.06 32.04 68.06 75.58 56.01 39.04 51.91 98.73 44.03 52.99 59.15 70.82 43.32 28.08 48.92 36.92 29.21 31.51 27.77 78.96 60.55 59.40 3 ER1a ExonRegion 0 7.33 7.42 6.87 5.70 5.72 13.65 4.78 6.18 12.31 7.57 11.56 1.15 2.94 18.63 3.16 14.93 15.43 4.33 10.01 7.50 34.13 11.48 31.32 4 E1a_E2a KnownJunction 1 11.11 17.76 21.38 22.91 12.65 2.90 1.68 13.76 38.57 21.44 12.69 6.30 18.83 31.49 4.45 52.55 4.77 25.87 55.91 11.38 9.08 33.68 141.70 5 ER2a ExonRegion 0 13.24 21.85 27.09 37.17 23.27 24.45 20.55 22.33 45.70 25.65 28.53 33.54 59.18 20.11 16.67 36.61 19.39 13.87 25.03 13.64 14.38 24.47 79.38 6 E2a_E3a KnownJunction 1 10.30 31.38 30.87 52.31 44.31 66.04 16.43 36.02 42.97 25.01 19.11 65.42 112.82 14.77 15.58 11.79 22.35 14.22 24.47 15.15 24.65 34.47 28.17 7 ER3a ExonRegion 0 7.24 26.63 27.78 30.40 34.35 43.24 11.85 21.99 40.44 17.28 29.71 40.17 54.43 24.82 21.39 11.75 16.12 9.97 14.82 18.16 27.88 36.15 22.13 8 E3_Da NovelBoundary 0 6.59 12.56 5.12 8.92 42.36 21.64 47.39 20.66 15.86 8.33 7.69 0.00 26.46 14.83 0.00 3.59 0.00 0.00 4.61 11.63 6.24 16.04 7.85 9 E3a_E4a KnownJunction 0 10.59 31.18 22.53 20.21 35.23 29.19 17.44 10.93 37.59 14.59 38.01 6.15 27.27 20.19 20.52 8.72 17.02 4.64 4.80 29.27 23.17 31.23 25.69 10 I3 Intron 0 7.42 8.70 4.69 15.61 29.77 15.55 13.23 13.38 25.39 6.84 8.97 13.76 18.82 10.49 7.04 10.65 9.86 3.64 7.99 7.71 13.07 11.94 10.87 11 I3_AR1 ActiveIntronRegion 0 5.60 8.97 3.74 19.67 31.07 20.48 19.26 18.18 32.42 8.79 11.36 29.79 37.21 13.37 4.99 11.34 11.16 2.57 10.77 6.88 8.09 11.34 15.11 12 I3_SR2 SilentIntronRegion 0 7.02 7.91 4.43 13.74 27.04 13.17 11.72 12.31 22.21 5.67 8.18 11.23 13.12 9.96 6.82 10.17 10.52 3.34 7.24 6.89 13.92 12.08 10.35 13 I3_AR4 ActiveIntronRegion 0 2.12 2.85 2.45 11.81 25.51 10.64 3.44 9.79 22.89 4.51 6.44 4.33 12.19 5.63 8.12 1.59 0.00 2.59 0.00 12.48 13.66 9.72 4.89 14 I3_AR5 ActiveIntronRegion 0 18.50 21.35 11.62 34.80 69.63 37.97 22.55 21.16 57.19 19.12 13.94 16.56 54.17 14.21 16.17 20.07 4.92 10.82 14.25 18.92 18.11 15.84 13.29 15 E4_Aa NovelBoundary 0 41.41 18.42 14.87 46.01 86.42 32.59 48.05 37.30 74.62 26.22 17.74 12.60 54.87 6.83 8.90 16.49 8.60 0.00 14.12 22.05 3.15 25.29 16.82 16 ER4a ExonRegion 0 31.52 51.78 42.84 68.16 77.99 50.16 32.42 56.13 98.90 36.97 54.03 82.37 78.93 35.00 20.52 34.47 27.09 16.79 16.04 26.70 45.12 48.99 33.66 17 E4a_E5a KnownJunction 0 55.19 63.34 51.45 128.46 114.43 40.49 44.74 72.66 137.76 65.78 56.33 108.94 105.51 44.74 34.86 55.54 32.35 21.89 28.80 43.21 63.94 94.85 44.39 18 ER5a ExonRegion 0 31.75 44.69 28.07 84.44 89.31 54.30 48.68 56.96 129.78 52.85 62.55 109.53 99.04 51.38 28.01 65.51 58.50 38.31 33.87 37.57 99.43 75.34 60.44 19 E5a_E6a KnownJunction 0 45.71 60.19 16.74 68.72 56.96 47.70 24.82 34.83 107.35 47.81 76.39 91.68 93.01 51.27 33.62 81.43 52.45 59.32 28.71 36.24 139.80 70.23 46.01 20 E6_Aa NovelBoundary 0 6.30 6.05 4.97 5.43 4.16 2.90 1.77 6.90 6.34 5.16 2.68 13.65 20.29 4.71 19.66 26.75 4.58 4.02 14.02 3.26 3.15 0.00 8.11 21 ER6a ExonRegion 0 38.96 58.99 22.92 60.09 67.17 52.85 43.10 51.66 94.13 48.33 62.83 59.69 53.96 48.90 33.07 73.58 59.88 53.05 37.48 32.88 158.77 59.62 67.53 22 E6_Da NovelBoundary 0 3.26 3.35 3.49 7.23 12.14 18.28 6.45 6.61 8.85 7.41 9.63 0.00 20.13 9.71 0.00 20.08 8.32 10.90 21.37 9.14 17.48 12.12 19.46 23 E6a_E7a KnownJunction 0 79.05 108.47 26.29 67.56 134.55 64.79 62.58 65.88 98.49 50.61 57.38 42.91 53.41 48.33 29.05 88.61 48.43 72.79 77.18 36.30 140.67 74.70 74.52 24 ER7a ExonRegion 0 30.56 51.05 38.50 90.54 106.26 62.55 37.35 60.73 120.85 52.55 62.74 44.91 41.46 56.32 35.95 58.66 40.79 33.02 34.69 35.99 116.40 83.31 71.75 25 E7_Da NovelBoundary 0 20.37 2.83 6.00 27.14 11.04 2.73 25.57 10.72 12.30 5.37 14.16 25.21 61.03 9.77 8.90 4.36 21.79 4.77 9.60 6.14 19.77 19.29 19.63 26 E7a_E8a KnownJunction 0 10.74 49.20 38.82 110.81 103.90 72.69 64.79 75.70 137.90 69.68 54.91 39.01 34.09 59.22 34.37 38.62 49.28 17.66 22.02 25.31 83.03 62.76 48.06 27 I7 Intron 0 9.93 10.24 3.91 8.13 13.30 6.71 9.69 10.13 12.07 8.37 7.07 10.28 15.16 7.74 5.69 13.13 5.24 4.70 4.84 7.49 3.19 23.29 9.12 28 I7_SR1 SilentIntronRegion 0 9.96 10.27 3.92 8.15 13.33 6.73 9.71 10.16 12.10 8.40 7.09 10.31 15.20 7.76 5.70 13.16 5.25 4.71 4.85 7.51 3.20 23.36 9.15 29 E8_Aa NovelBoundary 1 31.64 16.90 11.35 24.74 22.07 14.08 36.43 31.63 28.47 28.50 4.47 69.17 43.02 7.00 4.45 7.86 4.49 2.03 0.00 2.88 8.03 51.62 7.68 30 ER8a ExonRegion 0 33.61 54.86 46.52 91.12 113.06 101.42 62.18 73.91 157.92 59.02 71.98 63.70 92.72 73.35 46.42 53.43 52.71 30.97 38.08 32.43 93.28 83.00 65.41 31 E8a_E9a KnownJunction 0 71.27 69.46 37.55 99.49 92.87 67.12 90.09 77.75 151.10 57.14 90.87 114.34 208.10 59.33 18.91 77.50 46.19 41.74 20.80 18.22 101.87 95.34 84.77 32 ER9a ExonRegion 0 54.86 75.67 37.05 86.50 87.43 72.03 55.31 84.05 144.74 65.55 76.53 81.40 83.55 55.20 49.83 57.27 49.97 32.14 39.11 34.31 115.98 93.18 84.31 33 E9a_E10a KnownJunction 0 18.97 74.59 27.02 63.89 105.86 103.75 45.22 75.62 149.77 56.06 94.18 88.23 61.20 65.45 43.27 60.07 45.82 28.31 47.62 35.60 150.06 64.60 68.29 34 I9_AR2 ActiveIntronRegion 0 10.01 11.35 8.44 14.92 13.34 13.10 9.60 12.46 18.12 10.95 2.45 3.63 6.27 3.01 5.43 6.17 1.25 6.40 13.50 8.44 4.40 3.75 6.10 35 E10_Aa NovelBoundary 1 17.63 13.02 25.04 48.65 4.33 18.63 11.17 26.66 21.90 27.91 4.26 23.71 0.00 6.95 9.64 14.53 8.04 19.90 17.88 17.19 28.42 0.00 3.16 36 ER10a ExonRegion 0 80.47 71.72 58.46 104.75 130.65 94.96 57.74 89.24 129.63 62.67 46.49 44.35 65.05 44.52 43.84 48.50 43.01 36.06 39.24 37.72 58.69 73.08 51.02 37 IG14_AR7 ActiveIntergenicRegion 0 8.43 25.15 7.24 17.76 17.19 17.67 8.89 8.17 14.17 9.93 4.31 2.71 2.16 3.40 4.63 1.69 2.89 8.35 10.40 13.93 2.16 3.46 4.71 38 IG14_SR7 SilentIntergenicRegion 0 17.21 26.68 8.21 21.29 18.68 18.22 16.94 12.29 15.82 15.36 2.41 2.29 4.16 4.76 4.60 5.79 3.46 11.56 10.98 14.61 5.20 3.58 8.62 39 IG14_AR6 ActiveIntergenicRegion 0 12.60 20.44 6.73 24.79 15.38 14.10 13.47 11.49 17.90 10.92 2.05 3.72 3.94 3.62 5.37 1.77 4.83 4.86 4.62 11.09 2.22 2.74 2.55 40 IG14_AR3 ActiveIntergenicRegion 0 5.61 6.20 4.04 8.45 8.43 15.40 4.77 5.19 4.38 0.40 0.00 0.00 8.91 1.62 0.58 3.86 0.00 6.19 13.06 7.34 3.53 2.08 2.64 41 IG14_AR2 ActiveIntergenicRegion 0 2.90 9.02 3.33 8.33 0.81 8.33 2.65 5.41 7.33 4.26 4.20 3.48 0.00 1.45 0.00 2.13 1.08 21.09 5.12 17.39 3.55 2.04 6.51 42 IG14_AR1 ActiveIntergenicRegion 0 0.17 7.44 1.06 8.89 0.00 1.98 11.18 5.09 4.78 3.83 0.92 0.00 0.00 1.62 3.44 0.00 5.56 10.84 1.68 22.73 4.99 0.27 5.10