Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEC23A Gene 0 49.97 126.43 65.01 88.86 76.76 106.21 85.12 79.83 108.60 81.55 169.14 185.23 118.91 142.88 78.20 119.56 154.83 131.01 58.37 141.61 358.33 400.67 259.27 2 457395 Transcript 0 0.00 0.00 0.55 0.00 0.00 0.00 1.41 0.00 0.49 0.39 0.72 0.00 0.00 0.00 3.58 1.31 0.00 1.31 0.00 0.00 0.00 0.80 1.08 3 307712 Transcript 0 71.72 183.29 96.28 117.34 118.23 144.61 122.47 116.46 147.21 117.31 240.66 233.06 159.54 205.17 115.70 172.04 235.33 170.11 91.89 202.62 494.88 579.54 366.34 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1b ExonRegion 0 11.43 22.55 5.76 13.62 19.67 59.19 32.75 13.90 26.27 21.60 53.65 11.99 14.97 51.73 19.64 50.28 83.08 93.58 34.57 50.50 233.67 105.15 168.73 6 E1a_E2a KnownJunction 1 9.56 20.33 27.62 41.49 29.97 16.24 15.72 41.44 82.84 64.28 179.94 12.60 34.09 147.98 20.15 111.34 197.29 184.96 93.56 104.89 458.82 204.27 246.44 7 ER2a ExonRegion 0 11.90 39.32 29.32 55.13 46.88 74.48 41.57 53.53 97.00 74.57 188.26 107.75 55.01 128.90 52.77 120.40 212.00 225.51 75.97 152.96 567.89 354.01 317.51 8 E2_Da KnownBoundary 0 24.45 69.92 55.88 78.84 49.83 178.65 123.26 76.32 106.45 83.49 237.43 118.09 101.62 186.47 96.30 113.73 276.67 242.75 101.46 130.71 470.00 400.53 384.65 9 E2a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 3.24 10 ER2b ExonRegion 0 25.70 84.70 32.82 65.66 43.30 124.76 93.04 85.67 106.61 87.91 268.49 185.28 105.21 185.91 59.21 129.84 268.88 189.34 57.18 181.62 584.65 427.35 287.58 11 E2b_E3a KnownJunction 1 27.56 88.73 31.37 78.18 70.29 127.43 84.04 94.96 122.57 98.26 246.17 212.17 152.43 182.94 38.94 128.86 239.83 146.21 69.55 239.11 565.20 495.20 288.02 12 ER3a ExonRegion 0 20.40 91.90 47.49 90.35 61.36 81.19 77.50 100.85 119.93 91.26 260.64 202.07 122.83 196.15 64.83 162.49 247.40 167.79 62.94 214.01 528.70 564.71 354.88 13 E3a_E4a KnownJunction 0 41.56 102.55 84.03 93.29 59.42 66.16 83.69 108.02 124.59 93.16 312.34 216.52 99.83 189.42 92.96 172.35 270.50 148.03 77.84 237.45 390.62 682.26 339.57 14 ER4a ExonRegion 0 34.18 77.39 51.62 77.00 52.75 74.43 62.18 90.38 134.00 98.24 299.07 249.37 133.64 188.57 72.16 159.61 247.42 137.67 73.63 206.75 430.33 542.72 305.01 15 E4_Da NovelBoundary 0 0.00 11.71 10.23 28.27 3.65 8.35 34.98 4.35 3.56 2.69 0.00 6.30 7.30 4.94 4.45 0.00 4.21 0.00 9.04 24.29 5.13 3.12 4.10 16 E4a_E5a KnownJunction 1 36.67 62.95 29.54 79.68 58.23 82.68 78.12 83.96 134.08 87.73 240.64 212.92 175.31 203.19 37.09 126.98 231.23 103.88 72.76 188.24 403.04 493.91 291.94 17 I4 Intron 0 4.84 9.43 8.58 18.70 6.97 6.06 16.06 7.85 10.75 8.36 2.21 14.90 6.73 1.25 5.56 3.59 5.66 2.11 4.05 13.92 0.84 4.37 5.60 18 I4_SR1 SilentIntronRegion 0 4.88 9.51 8.66 18.87 7.03 6.11 16.20 7.92 10.85 8.43 2.23 15.03 6.79 1.26 5.61 3.62 5.71 2.12 4.08 14.04 0.85 4.41 5.64 19 ER5a ExonRegion 0 35.90 83.92 68.57 92.49 65.50 96.66 98.19 105.04 160.10 105.73 272.98 177.78 165.58 182.72 61.44 183.14 206.91 163.19 64.96 237.09 344.39 534.09 393.40 20 E5_Ab KnownBoundary 0 52.38 155.10 83.08 105.35 98.47 118.62 105.90 91.06 167.97 124.48 375.67 273.09 143.66 147.21 71.33 214.22 237.40 161.50 124.52 227.93 379.44 699.47 497.92 21 ER5b ExonRegion 0 38.06 120.01 73.10 68.56 71.77 100.16 96.74 85.60 147.52 97.64 288.99 246.18 147.50 198.68 79.60 183.71 229.89 180.66 75.42 194.46 534.59 511.40 413.42 22 E5a_E6a KnownJunction 0 53.27 193.78 63.16 79.11 70.97 123.96 120.92 80.55 188.11 98.42 331.72 358.32 203.40 220.91 69.84 272.83 267.88 202.87 68.90 192.39 682.70 704.55 356.73 23 ER6a ExonRegion 0 51.40 154.86 76.34 76.30 53.38 107.76 89.05 70.78 146.52 90.30 256.11 279.63 154.30 237.81 86.35 203.14 226.81 233.00 82.42 197.61 731.08 525.62 426.80 24 E6a_E7a KnownJunction 0 63.49 142.80 57.51 80.34 90.92 201.76 118.00 65.68 131.16 87.92 216.21 248.93 158.11 215.43 90.12 156.63 184.48 168.92 50.17 187.72 721.74 404.26 389.09 25 ER7a ExonRegion 0 33.53 134.16 57.40 100.31 86.29 113.14 109.12 84.79 161.34 97.13 241.27 305.63 129.22 235.84 104.06 237.20 234.00 299.09 76.05 225.33 836.38 517.69 463.16 26 E7a_E8a KnownJunction 0 37.04 166.55 67.98 90.60 112.14 122.88 95.44 82.68 165.16 107.02 217.53 269.34 142.04 190.12 92.84 193.80 246.75 296.76 91.58 218.28 716.74 456.19 365.70 27 ER8a ExonRegion 0 49.51 172.59 67.49 115.91 80.61 145.67 107.00 94.33 171.93 110.59 239.68 254.19 152.82 221.31 92.48 169.86 224.92 229.93 64.89 262.54 700.20 540.90 384.52 28 E8a_E9a KnownJunction 0 85.05 239.17 94.35 155.69 188.12 158.15 145.74 129.22 229.83 141.83 347.93 348.26 250.31 287.13 117.56 228.40 277.23 289.30 103.44 323.36 763.20 775.34 463.35 29 ER9a ExonRegion 0 52.66 188.18 99.92 152.98 102.07 137.98 105.44 111.22 188.24 125.28 302.52 314.45 223.99 225.39 101.17 184.71 255.76 228.12 85.79 264.03 538.20 650.85 389.76 30 E9a_E10a KnownJunction 0 52.97 194.77 99.76 149.27 103.57 142.99 122.73 108.31 187.64 124.29 348.46 305.80 331.80 214.02 122.38 211.31 282.19 155.16 92.90 257.14 471.73 695.25 385.76 31 E10_Aa NovelBoundary 0 0.00 6.64 23.00 16.08 4.33 0.00 4.46 6.57 8.28 4.43 5.11 0.00 0.00 0.00 0.00 0.00 9.54 0.00 0.00 2.81 0.00 3.12 0.00 32 ER10a ExonRegion 0 74.93 222.76 112.50 159.72 118.75 159.58 135.39 122.27 176.47 133.81 322.19 467.72 301.37 258.03 94.62 210.71 272.03 185.49 86.96 231.19 436.71 769.68 377.50 33 E10a_E11a KnownJunction 0 80.46 317.31 81.93 139.91 162.22 181.49 180.71 109.13 181.80 130.25 306.13 449.25 231.97 243.51 103.59 161.41 264.89 153.96 104.47 232.66 396.55 766.21 326.68 34 ER11a ExonRegion 0 45.02 234.41 81.28 114.52 149.35 203.80 142.33 101.17 165.86 126.00 309.93 360.36 225.35 192.69 95.63 196.12 251.81 217.62 108.89 233.15 449.45 643.47 376.69 35 E11_Da NovelBoundary 0 30.89 21.64 7.51 8.59 0.00 2.56 8.61 1.60 31.80 11.79 0.00 12.00 0.00 4.94 4.45 3.50 0.00 19.81 0.00 8.56 5.56 17.33 7.85 36 E11a_E12a KnownJunction 0 33.71 252.78 110.61 124.89 150.42 189.32 128.69 104.62 156.91 144.60 274.39 243.23 181.81 217.38 83.32 130.14 265.64 215.43 64.10 228.12 539.25 527.77 348.03 37 I11_SR1 SilentIntronRegion 0 32.45 20.34 3.14 8.26 2.34 3.17 14.78 8.32 14.28 1.84 0.00 7.22 7.52 0.34 2.54 2.23 2.82 1.66 14.80 6.03 2.07 5.90 6.36 38 ER12a ExonRegion 0 51.69 189.94 106.51 135.46 96.30 136.11 132.60 97.58 173.40 131.54 302.16 365.46 205.06 279.84 104.57 232.72 282.26 243.06 115.66 238.63 619.46 669.34 464.94 39 E12a_E13a KnownJunction 0 107.06 200.95 73.59 138.71 84.80 145.60 141.67 122.07 181.25 132.51 357.04 354.12 314.10 324.68 127.20 276.51 333.52 226.96 120.66 313.32 731.81 678.59 442.78 40 ER13a ExonRegion 0 95.56 244.14 112.06 130.88 102.15 117.50 129.03 103.48 175.57 124.69 290.21 267.05 184.97 241.43 116.97 232.05 274.34 316.03 110.74 249.63 788.85 577.72 482.46 41 E13a_E14a KnownJunction 0 102.02 313.10 93.76 115.44 122.84 120.73 161.64 106.30 164.35 148.28 224.53 255.08 124.50 245.81 91.72 254.80 272.65 283.71 164.15 206.52 737.44 728.80 444.74 42 E13a_E14b KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 4.24 0.00 1.48 1.18 2.16 0.00 0.00 0.00 10.75 3.93 0.00 3.94 0.00 0.00 0.00 0.00 0.00 43 ER14a ExonRegion 0 87.62 305.08 83.30 101.03 93.95 165.01 145.89 94.18 154.60 131.20 277.10 245.47 154.95 229.37 100.18 209.17 286.99 249.79 129.46 215.21 850.34 667.28 446.26 44 E14_Ab KnownBoundary 0 108.46 425.12 97.66 101.69 102.72 248.04 198.73 88.43 148.75 111.99 263.49 258.53 175.64 289.19 111.38 182.69 286.30 205.07 113.70 243.72 882.37 595.62 490.33 45 ER14b ExonRegion 0 67.16 272.27 94.46 88.16 116.96 217.65 133.98 77.55 139.54 94.73 192.43 202.81 151.23 216.91 129.72 146.49 247.05 178.37 73.90 177.35 693.68 529.26 336.15 46 E14_Da KnownBoundary 0 79.72 257.26 78.41 94.03 175.64 237.99 132.66 84.00 123.44 80.75 212.74 120.34 169.14 150.45 125.35 146.37 232.44 168.26 61.84 175.39 581.82 463.97 388.06 47 ER14c ExonRegion 0 74.99 226.71 107.02 141.69 196.29 205.16 153.01 118.92 163.10 110.21 243.27 206.04 161.97 202.46 119.31 204.92 233.07 262.74 91.24 212.99 624.44 628.11 463.26 48 E14b_E15a KnownJunction 0 99.43 266.66 162.56 191.65 255.60 208.69 198.25 151.40 210.85 151.69 253.96 313.00 204.05 201.90 117.07 256.09 256.76 300.21 151.63 251.39 640.01 823.59 550.34 49 ER15a ExonRegion 0 77.12 200.91 123.81 160.12 168.02 142.82 158.01 136.64 200.48 143.97 289.36 273.98 191.27 237.48 152.06 236.74 264.11 210.34 104.30 250.24 447.30 912.53 460.07 50 E15a_E16a KnownJunction 0 96.09 313.37 99.76 151.60 185.74 153.32 146.27 142.69 201.21 155.53 296.50 299.05 244.14 230.80 152.67 170.04 278.82 129.33 68.99 251.58 382.83 796.16 390.28 51 I15_AR1 ActiveIntronRegion 0 6.79 5.99 2.04 22.22 2.90 2.67 9.14 0.67 7.91 5.03 9.64 3.43 2.74 1.67 8.58 7.76 5.59 6.06 4.42 8.39 11.36 10.10 13.91 52 ER16a ExonRegion 0 124.56 289.58 119.07 167.70 175.86 240.59 160.37 145.20 193.91 141.83 255.01 351.19 219.33 206.74 153.68 161.08 224.77 135.75 68.58 213.30 315.04 661.35 338.33 53 E16a_E17a KnownJunction 0 84.53 187.40 150.82 163.58 115.53 158.26 120.92 110.57 159.92 133.18 201.63 295.30 242.68 184.89 175.66 155.60 173.63 87.26 64.94 175.32 341.88 412.35 350.16 54 ER17a ExonRegion 0 82.20 205.06 161.13 153.61 103.59 134.16 124.60 142.35 163.45 142.44 272.58 311.27 205.77 246.01 178.74 195.72 249.35 153.02 123.75 194.91 522.58 614.28 457.91 55 E17a_E18a KnownJunction 0 87.05 256.07 168.65 125.92 128.52 183.19 137.17 185.45 178.33 169.77 260.17 379.17 255.34 246.34 134.74 153.89 355.40 180.32 103.44 193.48 731.69 499.67 313.28 56 I17_AR1 ActiveIntronRegion 0 3.01 0.32 3.68 20.32 0.54 5.13 4.47 10.95 7.93 9.68 0.00 0.00 0.73 0.00 1.35 0.00 2.71 0.00 0.00 1.42 0.64 8.80 0.00 57 ER18a ExonRegion 0 95.20 227.87 141.92 147.45 138.74 180.22 129.29 152.02 148.50 134.03 227.31 277.03 161.90 240.26 163.20 182.16 251.57 189.49 134.64 178.35 671.86 469.47 408.97 58 E18a_E19a KnownJunction 0 115.50 215.22 115.16 121.40 152.46 209.60 116.32 122.40 129.98 107.99 156.93 104.28 79.05 205.31 208.17 225.50 164.66 199.76 96.57 174.69 503.79 544.55 442.95 59 ER19a ExonRegion 0 115.06 196.61 109.15 106.28 140.88 212.75 142.59 115.23 122.91 103.12 200.96 146.55 128.83 226.74 145.15 160.81 218.61 168.85 115.40 192.81 479.71 539.51 392.93 60 E19a_E20a KnownJunction 0 75.79 172.73 99.85 98.69 165.87 156.33 176.08 119.40 99.97 105.92 196.37 137.59 124.02 239.80 183.08 129.11 208.88 120.92 111.44 202.68 356.08 539.53 281.19 61 I19 Intron 0 12.55 4.25 5.03 10.17 4.86 2.44 6.55 4.79 4.79 3.57 2.69 6.39 5.30 1.30 2.86 2.74 3.94 1.17 1.49 2.77 2.27 7.60 2.93 62 I19_AR1 ActiveIntronRegion 0 21.70 4.62 10.98 16.00 4.39 3.05 6.49 7.41 7.98 3.79 1.95 5.90 2.72 0.90 1.72 4.19 4.33 0.77 2.14 4.33 1.85 8.10 2.32 63 I19_SR2 SilentIntronRegion 0 25.03 7.95 7.73 14.06 5.75 2.63 8.01 5.87 3.91 4.23 2.13 6.17 9.63 1.20 4.89 3.10 2.80 1.62 1.24 2.71 1.29 5.27 3.44 64 ER20a ExonRegion 0 38.73 63.95 36.64 58.60 46.21 57.23 47.11 50.52 45.20 39.48 38.53 76.30 57.19 40.89 43.45 26.00 25.81 14.77 14.23 39.80 35.35 172.41 58.48