Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALNTL1 Gene 0 41.09 42.57 314.66 98.26 71.90 200.34 70.38 158.89 253.73 87.08 0.66 0.30 2.60 0.78 1.57 0.15 4.27 142.34 136.44 77.70 101.98 194.44 54.82 2 448469 Transcript 0 0.63 6.39 23.30 5.38 9.16 23.27 19.46 6.49 21.20 10.68 0.00 0.00 0.00 0.00 0.00 0.86 0.11 22.65 8.39 16.71 7.39 15.30 3.59 3 337827 Transcript 0 32.48 32.73 326.27 110.13 87.58 203.32 77.03 173.52 268.65 80.11 3.17 0.77 1.23 0.32 1.15 0.27 6.00 120.30 138.57 65.12 100.19 202.16 59.99 4 IG29_SR1 SilentIntergenicRegion 0 24.52 57.14 18.46 32.59 48.51 52.34 37.01 34.09 35.29 65.29 7.76 16.09 8.74 6.72 6.45 12.35 12.73 46.84 19.42 43.03 11.45 8.05 10.04 5 IG29_AR2 ActiveIntergenicRegion 0 24.84 54.51 26.19 50.31 51.95 54.73 34.53 39.56 29.60 77.01 8.96 13.21 4.84 9.14 12.83 5.17 7.65 22.52 15.23 48.40 5.10 15.09 8.51 6 IG29_AR4 ActiveIntergenicRegion 0 6.04 7.78 15.39 10.66 8.89 0.00 6.35 28.93 6.61 16.26 0.40 3.06 0.00 0.33 2.22 0.00 0.58 0.00 4.03 9.32 0.00 0.00 0.00 7 IG29_AR5 ActiveIntergenicRegion 0 12.70 12.27 15.53 7.87 19.59 7.10 3.93 26.15 5.94 17.43 0.00 2.09 0.00 0.00 1.22 0.00 2.45 0.00 1.54 2.95 0.00 0.00 0.00 8 IG29_SR4 SilentIntergenicRegion 0 6.32 9.21 14.74 4.39 14.64 3.64 3.54 24.58 10.48 16.63 1.34 3.76 0.00 0.00 3.07 0.00 1.36 4.21 0.19 14.61 0.00 0.00 0.00 9 IG29_AR6 ActiveIntergenicRegion 0 7.46 9.77 13.58 6.69 13.78 7.08 10.64 25.01 10.44 9.89 0.03 2.15 1.30 0.22 1.09 0.00 0.00 6.30 6.37 14.66 0.00 3.50 0.00 10 ER1a ExonRegion 0 7.20 9.22 62.19 12.42 14.83 78.88 21.81 49.72 76.47 27.75 0.00 0.00 0.73 0.00 0.39 0.00 3.67 64.02 67.16 37.70 59.35 65.10 20.82 11 E1a_E2a KnownJunction 0 0.00 9.14 157.42 41.05 36.08 70.07 27.38 143.27 223.81 66.40 0.00 0.00 0.00 0.00 0.00 0.00 8.13 154.87 171.11 40.20 122.38 131.59 48.32 12 ER2a ExonRegion 0 12.06 11.82 161.22 38.26 40.10 205.92 56.70 120.55 213.11 69.71 0.00 0.00 1.31 0.43 0.66 0.00 4.39 152.05 129.69 76.86 124.52 157.38 37.84 13 E2a_E3a KnownJunction 0 9.04 23.15 163.51 39.12 11.88 125.33 38.02 113.24 226.10 54.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 150.85 188.99 76.44 118.98 159.39 63.77 14 ER3a ExonRegion 0 23.67 26.48 187.05 53.37 27.84 121.90 33.75 112.68 206.94 77.87 0.00 0.00 1.89 0.69 0.00 0.00 3.40 142.31 153.96 78.10 116.86 155.02 40.16 15 E3a_E4a KnownJunction 0 37.19 30.46 209.45 68.96 57.64 136.29 28.57 145.69 222.77 83.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 151.89 116.14 84.75 92.05 182.17 43.88 16 ER4a ExonRegion 0 15.94 31.01 210.15 66.44 40.14 136.11 43.81 139.98 228.86 88.38 0.00 0.00 0.00 0.00 0.00 0.00 4.22 176.24 167.98 93.62 113.82 196.43 51.39 17 E4a_E5a KnownJunction 0 27.26 31.84 207.80 75.98 41.68 214.02 64.74 147.54 264.44 91.28 0.00 0.00 0.00 0.00 0.00 0.00 4.30 180.86 230.78 110.13 103.23 203.11 51.73 18 ER5a ExonRegion 0 19.56 17.75 201.26 55.80 46.46 143.65 52.04 106.38 191.85 73.91 0.00 0.00 0.00 0.76 0.00 0.00 1.70 154.12 137.79 88.78 104.78 139.72 52.95 19 E5a_E6a KnownJunction 0 13.34 12.76 207.74 55.00 22.50 96.82 62.27 96.52 168.20 73.71 0.00 0.00 0.00 0.00 0.00 0.00 4.68 110.02 86.12 96.51 71.41 115.12 15.71 20 ER6a ExonRegion 0 6.96 13.48 165.69 52.45 29.65 106.83 34.81 79.13 159.21 68.74 0.00 0.00 0.00 0.15 2.83 0.00 0.87 88.24 101.83 78.74 101.35 150.76 35.75 21 E6a_E7a KnownJunction 0 2.89 30.39 200.23 50.78 39.22 199.49 43.01 117.14 201.42 92.27 0.00 0.00 0.00 0.00 5.19 0.00 0.00 134.02 196.99 110.13 114.04 150.57 67.61 22 ER7a ExonRegion 0 20.68 32.58 200.14 75.07 68.84 230.04 70.17 133.46 227.99 92.27 0.00 0.00 0.91 2.38 1.02 1.72 1.91 158.82 135.88 102.34 109.88 177.79 77.55 23 E7a_E8a KnownJunction 0 24.30 44.27 271.16 72.78 76.23 212.49 74.68 159.12 257.20 88.75 0.00 0.00 6.82 0.00 0.00 0.00 0.00 173.11 81.04 94.53 131.96 142.86 44.05 24 ER8a ExonRegion 0 29.01 22.15 246.26 75.71 56.57 237.98 74.48 162.78 248.88 97.53 0.00 0.00 5.57 0.75 3.45 0.00 5.63 198.80 182.28 86.38 124.29 210.31 80.36 25 E8a_E9a KnownJunction 0 56.16 16.77 277.64 81.21 43.21 213.17 65.27 169.23 262.35 106.05 0.00 0.00 13.15 0.00 5.19 0.00 3.65 165.36 129.42 93.96 109.78 232.14 53.44 26 ER9a ExonRegion 0 39.28 26.20 239.54 82.30 56.86 200.29 69.05 154.66 264.33 77.12 0.52 0.00 2.66 1.31 1.37 0.00 3.17 154.70 138.10 94.25 113.91 210.13 74.91 27 E9a_E10a KnownJunction 0 47.34 19.86 264.86 90.86 58.83 135.72 76.71 128.27 276.62 91.46 2.68 0.00 0.00 0.00 0.00 0.00 3.83 152.26 117.65 92.68 104.71 204.40 46.95 28 ER10a ExonRegion 0 30.33 32.70 277.62 78.74 67.21 200.38 61.37 152.89 302.10 87.80 0.84 0.00 3.95 0.54 0.00 0.00 9.54 145.16 147.35 87.74 112.44 184.19 70.41 29 E10a_E11a KnownJunction 0 41.64 52.75 328.82 123.06 107.22 303.46 102.55 177.65 377.08 118.51 2.63 0.00 13.64 0.00 0.00 0.00 0.00 206.89 181.93 98.43 127.01 207.46 51.39 30 ER11a ExonRegion 0 32.04 28.23 295.67 77.27 86.00 245.73 84.08 148.55 294.95 93.76 0.46 0.00 3.68 1.97 1.12 0.00 6.78 154.75 153.34 91.08 117.82 205.44 69.28 31 E11a_E12a KnownJunction 0 30.60 18.15 300.79 61.63 63.75 174.22 78.08 144.70 290.65 72.34 0.00 0.00 0.00 2.47 0.00 0.00 4.49 85.64 140.99 108.47 113.86 170.05 65.64 32 ER12a ExonRegion 0 27.72 21.13 320.23 108.61 70.84 230.82 79.23 169.55 311.35 102.74 1.10 0.00 7.93 2.84 0.00 0.00 4.52 180.22 181.30 93.64 124.67 205.33 81.21 33 E12a_E13a KnownJunction 0 39.34 26.84 417.49 133.45 91.43 245.09 94.07 223.40 352.22 162.30 0.00 0.00 6.82 2.41 0.00 0.00 0.00 241.47 235.11 109.23 129.11 279.35 78.70 34 ER13a ExonRegion 0 46.00 36.23 347.47 114.25 67.18 190.24 73.41 201.35 327.31 115.68 0.00 0.00 3.83 1.66 0.00 0.00 1.19 190.93 162.27 93.71 132.72 232.00 72.42 35 E13a_E14a KnownJunction 0 50.97 24.07 378.25 121.50 43.89 161.50 71.94 196.21 344.24 107.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130.99 159.72 90.70 90.75 251.49 76.23 36 ER14a ExonRegion 0 39.59 43.96 343.42 115.79 93.76 272.62 99.62 202.53 307.77 108.39 1.27 0.00 0.00 1.01 0.83 0.59 4.61 162.62 152.80 89.94 108.58 220.79 64.51 37 E14_Da KnownBoundary 0 7.33 7.63 50.18 12.12 28.69 54.06 30.16 14.42 40.28 18.86 0.00 0.00 0.00 0.00 0.00 4.36 0.00 43.15 26.17 27.80 14.09 17.08 11.10 38 E14a_E15a KnownJunction 0 19.48 23.94 305.87 119.76 137.69 321.75 100.21 176.82 282.49 86.01 4.95 0.00 0.00 0.00 0.00 0.00 8.13 135.51 189.75 68.84 126.71 235.20 87.41 39 ER14b ExonRegion 0 0.63 6.39 23.30 5.38 9.16 23.27 19.46 6.49 21.20 10.68 0.00 0.00 0.00 0.00 0.00 0.86 0.11 22.65 8.39 16.71 7.39 15.30 3.59 40 E14_Db NovelBoundary 0 9.78 23.29 66.08 31.70 33.96 61.50 30.91 29.94 53.04 29.15 0.00 0.00 0.00 0.00 4.45 0.00 0.00 61.06 70.59 26.97 9.20 30.43 18.10 41 I14 Intron 0 8.94 14.41 88.55 20.74 21.39 51.13 32.80 19.32 43.35 25.53 0.28 0.00 1.05 0.63 0.55 0.31 1.91 34.76 33.92 30.10 9.86 20.72 5.60 42 I14_AR1 ActiveIntronRegion 0 8.80 14.52 88.00 20.65 21.29 49.30 31.52 19.70 43.94 25.54 0.26 0.00 1.03 0.67 0.47 0.26 1.90 35.92 35.14 30.52 10.28 20.86 5.91 43 I14_SR1 SilentIntronRegion 0 11.30 12.87 98.01 22.34 23.19 79.42 52.52 13.74 34.96 25.63 0.64 0.00 1.29 0.00 1.76 0.99 2.20 17.76 15.93 24.11 3.67 18.74 0.98 44 E15_Aa NovelBoundary 0 38.45 41.44 187.49 53.97 89.39 129.24 64.39 21.97 81.13 35.40 0.00 0.00 6.98 0.00 0.00 0.00 4.77 55.55 24.00 25.76 10.63 36.31 12.55 45 ER15a ExonRegion 0 33.03 21.74 310.51 118.55 75.19 194.23 73.85 167.56 289.12 79.68 1.93 2.60 1.31 0.59 1.80 1.08 6.96 141.04 159.70 72.34 109.15 267.94 75.98 46 E15_Da NovelBoundary 0 26.60 14.47 178.20 42.42 58.57 124.81 63.11 25.22 112.41 21.87 0.00 0.00 6.17 0.00 0.00 0.00 8.51 59.86 81.60 59.63 35.65 65.58 26.21 47 E15a_E16a KnownJunction 0 6.89 10.06 210.13 52.94 30.81 47.87 41.51 139.04 194.91 48.73 4.69 0.00 0.00 0.00 0.00 0.00 4.21 51.36 57.98 39.05 63.51 68.34 19.89 48 I15 Intron 0 34.14 38.91 260.28 54.30 56.25 181.99 57.07 62.01 143.88 58.86 0.37 0.00 0.56 0.84 1.71 0.14 6.71 103.56 87.79 55.65 56.45 119.08 41.96 49 I15_AR1 ActiveIntronRegion 0 34.17 38.94 260.52 54.35 56.31 182.16 57.13 62.06 144.02 58.91 0.37 0.00 0.56 0.84 1.71 0.14 6.72 103.66 87.87 55.70 56.50 119.19 42.00 50 E16_Aa NovelBoundary 0 93.20 27.30 421.57 71.79 69.02 126.52 71.99 110.94 229.22 96.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 138.87 95.34 65.83 52.63 101.83 29.19 51 ER16a ExonRegion 0 70.50 75.19 478.57 149.25 106.62 249.44 92.57 210.64 308.09 106.04 1.10 0.48 3.63 0.69 2.80 0.00 4.70 153.27 146.84 80.25 101.40 237.18 56.68 52 IG30_SR1 SilentIntergenicRegion 0 14.76 2.59 30.95 9.38 12.84 13.44 8.29 29.72 40.51 9.34 0.00 0.76 1.68 1.18 1.22 0.19 2.25 12.00 12.22 7.41 13.64 28.12 11.15 53 IG30_AR2 ActiveIntergenicRegion 0 7.88 4.29 17.04 7.06 6.70 11.95 5.59 17.95 26.63 3.97 0.37 0.00 1.02 0.52 0.62 1.01 1.27 6.55 4.84 3.57 11.32 9.48 7.44 54 IG30_AR3 ActiveIntergenicRegion 0 9.37 2.79 21.69 5.38 8.18 10.96 5.54 22.87 23.69 4.26 0.61 0.25 0.00 0.00 0.25 0.63 0.83 7.61 4.15 3.29 4.88 6.62 4.03 55 IG30_SR4 SilentIntergenicRegion 0 6.82 7.48 14.31 12.95 1.22 0.92 2.55 4.17 4.71 9.34 0.43 0.85 3.85 0.52 4.12 2.15 4.39 2.94 5.12 2.77 0.00 0.00 2.86 56 IG30_AR5 ActiveIntergenicRegion 0 9.59 7.34 7.62 18.39 6.25 2.10 3.88 2.70 3.22 7.47 0.00 2.74 2.65 0.79 0.77 3.85 3.13 1.90 1.87 4.85 0.00 0.39 0.55