Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZBTB25 Gene 0 45.19 42.24 17.88 37.42 42.17 31.20 34.78 41.29 45.55 32.18 87.90 114.96 107.40 84.48 47.58 93.70 90.48 56.22 35.11 53.99 35.02 20.73 39.26 2 394715 Transcript 0 14.67 10.90 4.13 8.02 10.18 5.91 6.99 8.46 9.82 5.62 21.96 25.32 28.70 25.11 12.30 24.51 25.67 13.51 8.96 12.93 11.64 4.66 13.59 3 261683 Transcript 0 7.51 7.49 3.64 7.04 7.70 6.57 10.31 4.18 3.67 7.40 9.97 3.85 5.06 5.92 8.15 8.08 14.65 3.86 7.53 7.04 7.21 2.40 15.16 4 ER1a ExonRegion 1 1.10 1.06 0.00 0.00 1.39 3.82 2.34 1.22 0.00 0.84 35.21 9.68 10.29 28.32 6.57 1.70 22.33 2.90 3.32 6.67 9.17 3.25 9.17 5 E1_Da NovelBoundary 1 0.00 0.00 0.00 5.56 4.33 2.84 4.06 1.85 8.36 7.74 112.13 10.65 19.48 50.50 20.15 19.40 34.97 18.28 9.60 12.40 36.33 3.06 11.61 6 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 I1 Intron 1 0.89 0.68 0.61 2.22 2.92 4.01 3.00 1.95 3.86 5.31 49.37 4.02 2.02 22.89 10.57 18.23 25.24 14.96 9.90 8.39 8.52 1.39 3.95 8 I1_SR1 SilentIntronRegion 1 0.82 0.53 0.37 2.13 2.60 4.51 3.20 1.95 4.56 5.78 71.60 6.12 3.12 29.71 14.51 23.19 34.01 13.53 9.07 8.54 7.33 1.60 4.35 9 I1_AR1 ActiveIntronRegion 0 0.23 1.47 1.34 2.87 4.84 2.93 3.02 2.93 3.64 5.82 11.89 0.21 0.00 13.28 2.59 12.12 11.28 22.63 13.06 11.11 12.58 1.51 2.42 10 ER2a ExonRegion 0 12.86 11.50 4.05 4.74 15.00 19.72 19.30 1.24 3.08 4.69 9.28 1.97 3.68 9.19 11.09 19.78 21.70 9.71 18.63 12.75 4.76 4.76 24.62 11 E2a_E3a NovelJunction 0 3.78 2.63 0.00 1.63 0.00 5.28 0.00 0.00 1.56 1.58 2.11 0.00 5.84 2.18 0.00 0.00 12.81 3.65 0.00 2.62 2.66 0.00 0.00 12 E2a_E5a NovelJunction 0 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 1.32 9.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E6a KnownJunction 0 7.56 8.95 5.65 13.65 4.07 0.00 10.29 7.85 7.93 13.51 15.79 5.25 6.82 6.95 13.35 0.00 22.25 1.87 3.95 8.37 16.87 2.45 19.38 14 I2 Intron 0 2.23 1.75 2.10 1.36 2.05 4.04 4.81 3.20 5.11 7.03 7.95 9.28 9.19 11.12 7.51 16.78 14.53 8.97 1.22 8.76 11.18 2.19 4.78 15 I2_AR1 ActiveIntronRegion 0 2.16 1.68 2.22 1.48 2.00 3.81 5.21 3.31 5.16 7.62 8.57 9.90 9.99 11.57 8.02 17.37 15.65 9.16 1.28 9.03 12.04 2.39 4.94 16 E3_Aa NovelBoundary 0 18.67 5.79 0.00 5.46 7.30 0.00 7.86 11.34 5.56 9.35 14.32 7.05 31.17 37.73 4.45 28.54 32.07 10.07 0.00 9.08 22.43 0.00 10.76 17 ER3a ExonRegion 0 6.18 5.61 3.40 9.62 10.15 6.45 8.97 10.52 18.27 6.74 42.59 48.60 41.94 34.01 11.50 41.40 47.43 24.06 12.88 21.30 16.10 7.05 17.78 18 E3_Da NovelBoundary 0 9.48 0.00 0.00 17.95 0.00 2.50 3.58 13.02 9.90 9.05 27.16 7.65 39.61 11.95 8.90 50.67 25.15 20.69 13.55 15.34 8.83 5.08 8.28 19 E3a_E4a KnownJunction 0 0.00 6.18 2.31 1.90 11.71 5.45 2.25 0.00 5.38 2.58 6.95 18.31 13.64 14.89 0.00 11.45 21.13 6.59 0.00 9.14 11.61 0.00 0.00 20 E3a_E6a NovelJunction 0 3.78 0.00 0.00 2.06 3.14 2.78 6.67 1.81 13.74 5.37 15.48 12.60 12.82 2.47 9.64 20.34 29.27 0.00 0.00 2.62 14.09 0.00 4.35 21 E4_Aa NovelBoundary 0 5.70 0.00 9.52 9.89 15.79 11.07 14.57 9.45 6.34 5.00 12.37 38.26 26.78 11.42 9.52 34.69 22.25 10.45 23.81 18.54 13.71 2.69 16.39 22 ER4a ExonRegion 0 10.10 9.74 5.94 10.04 8.36 7.78 9.43 12.50 15.98 9.40 27.12 47.22 35.58 34.79 10.08 50.02 36.22 24.27 11.81 17.09 22.52 5.81 13.83 23 E4_Da NovelBoundary 0 56.01 6.12 3.16 29.10 29.12 14.76 29.46 36.64 38.86 14.88 28.53 18.46 19.15 26.08 19.66 31.70 37.49 39.30 4.80 8.56 22.05 5.45 17.84 24 E4a_E5a KnownJunction 0 0.00 5.53 0.00 1.30 0.00 0.00 0.00 2.55 0.00 0.00 0.00 6.30 0.00 4.65 0.00 4.27 0.00 2.11 0.00 9.59 0.00 3.12 3.41 25 I4 Intron 0 29.77 11.42 7.36 15.09 15.37 9.64 15.44 18.21 19.17 11.25 23.98 53.89 58.45 27.97 15.62 31.86 26.71 7.01 9.35 10.92 8.66 7.02 11.92 26 I4_SR1 SilentIntronRegion 0 12.66 9.19 4.13 10.71 11.74 6.91 13.84 11.87 14.43 8.40 21.92 39.87 40.43 28.07 11.09 29.63 23.55 7.82 10.02 9.33 10.15 5.54 10.54 27 I4_AR1 ActiveIntronRegion 0 35.27 10.45 7.55 16.89 19.65 12.35 17.52 21.38 19.66 13.65 24.10 56.25 71.05 24.67 18.87 23.05 19.86 3.11 8.21 15.13 2.35 10.66 7.99 28 I4_AR2 ActiveIntronRegion 0 44.27 7.78 6.21 15.24 17.14 12.08 14.97 18.67 24.74 6.95 20.23 62.46 74.61 25.37 22.12 30.58 32.13 4.09 5.20 8.36 3.72 10.66 10.18 29 I4_SR2 SilentIntronRegion 0 67.83 19.22 16.35 25.65 21.78 14.46 18.54 33.06 29.92 18.67 30.64 87.59 93.58 30.80 23.67 44.28 38.23 8.38 9.60 13.15 10.42 7.48 18.83 30 E5_Aa NovelBoundary 1 297.09 202.60 97.54 137.28 208.49 190.23 306.31 122.24 98.75 105.14 49.07 92.58 139.11 48.74 87.40 235.32 206.45 97.50 193.51 209.26 80.87 69.19 192.92 31 ER5a ExonRegion 0 47.27 49.05 9.13 17.06 29.30 23.78 32.91 28.72 26.50 21.90 33.35 59.27 66.92 48.83 48.83 74.30 45.41 40.32 36.18 33.40 19.78 12.38 53.29 32 E5_Da NovelBoundary 0 13.56 34.14 55.44 85.97 42.11 20.61 17.31 76.27 65.45 62.29 4.84 6.30 20.29 4.65 10.01 22.99 8.79 59.07 30.49 19.81 8.15 2.76 11.87 33 E5a_E6a KnownJunction 0 52.68 10.00 12.30 24.21 20.54 0.00 0.00 10.06 12.47 3.52 30.48 13.20 61.20 35.38 21.39 12.90 32.82 7.83 7.53 6.26 13.90 5.63 11.27 34 ER6a ExonRegion 0 70.89 45.82 26.94 71.54 82.34 36.14 48.33 57.21 84.31 46.12 131.21 128.06 116.42 113.76 74.53 134.14 149.51 100.13 76.17 79.78 58.58 33.67 104.81 35 E6a_E7a KnownJunction 0 133.06 78.14 36.66 79.11 93.46 91.48 91.86 44.69 84.35 46.34 153.78 266.64 177.10 144.33 94.69 218.83 196.91 73.75 40.47 108.02 30.09 25.78 77.68 36 E7_Aa NovelBoundary 0 24.37 5.99 6.27 11.49 0.00 7.72 12.14 9.32 9.49 3.22 2.68 12.00 19.80 0.00 14.09 4.27 17.77 3.52 7.44 12.98 5.68 2.57 4.10 37 ER7a ExonRegion 0 64.09 62.47 26.11 53.19 57.82 44.57 47.93 61.14 63.01 47.24 124.07 170.53 160.62 119.29 66.70 127.03 121.39 75.24 42.92 75.98 45.87 29.10 42.03 38 ER7b ExonRegion 0 2.12 2.03 1.23 2.73 4.01 0.00 1.32 3.46 0.00 4.01 4.83 4.33 4.69 1.62 0.00 4.46 0.00 0.00 0.00 0.00 0.00 0.00 1.47 39 IG44 Intergenic 0 38.79 44.29 14.29 34.68 47.59 26.52 27.00 31.36 25.39 24.31 17.32 57.91 49.83 23.00 21.61 15.85 17.95 8.13 11.69 20.29 3.90 11.30 8.17 40 IG44_AR11 ActiveIntergenicRegion 0 23.12 35.29 24.20 42.58 46.70 35.06 41.42 36.42 40.73 36.33 26.57 154.46 129.46 46.29 25.46 30.35 11.90 9.42 9.32 29.44 2.80 24.77 12.89 41 IG44_SR10 SilentIntergenicRegion 0 47.08 77.29 22.16 51.86 79.07 59.24 62.11 68.98 54.75 61.29 60.84 141.08 135.85 61.71 32.15 39.32 55.76 19.28 25.93 49.49 9.26 31.25 13.39 42 IG44_AR9 ActiveIntergenicRegion 0 44.11 93.12 26.39 72.73 99.82 58.46 67.27 65.55 66.56 67.15 57.70 163.61 157.50 60.37 45.27 50.15 57.57 21.82 36.77 55.14 14.39 29.92 21.47 43 IG44_SR9 SilentIntergenicRegion 0 45.41 72.99 21.67 68.03 77.99 46.27 53.64 45.34 45.97 44.05 25.25 112.34 83.79 49.07 38.72 31.05 26.30 13.41 24.22 31.42 3.46 23.37 14.64 44 IG44_AR8 ActiveIntergenicRegion 0 71.20 53.46 20.70 46.28 93.88 71.41 57.46 47.21 37.73 31.94 23.07 49.09 64.13 49.20 41.79 27.59 41.39 21.61 22.66 30.27 11.95 14.32 21.95 45 IG44_SR8 SilentIntergenicRegion 0 19.47 12.73 16.03 18.68 36.91 41.40 27.12 5.38 6.16 6.43 20.99 13.73 19.72 53.66 30.68 22.36 23.46 13.45 21.31 16.01 12.90 5.23 12.28 46 IG44_AR6 ActiveIntergenicRegion 0 55.67 40.66 24.67 57.85 74.73 32.53 30.31 35.26 31.47 30.46 20.79 86.34 61.31 33.25 46.68 21.50 31.00 8.09 13.81 24.65 4.03 19.92 6.47 47 IG44_SR7 SilentIntergenicRegion 0 55.41 58.17 21.03 34.65 59.43 17.20 17.41 25.60 16.50 23.31 13.52 115.38 98.46 38.62 50.02 13.23 10.64 8.14 12.68 14.38 1.24 22.41 9.30 48 IG44_AR5 ActiveIntergenicRegion 0 121.61 169.19 44.47 85.29 111.05 44.10 49.98 83.39 52.45 55.80 26.55 96.12 78.59 29.21 53.13 17.64 19.13 5.78 17.27 34.65 3.24 20.16 10.16 49 IG44_SR5 SilentIntergenicRegion 0 12.09 14.12 5.04 15.14 25.64 18.10 14.96 14.97 13.16 8.00 5.22 11.21 13.85 7.87 6.38 3.23 9.41 2.36 5.34 8.96 0.78 1.81 3.70 50 IG44_AR4 ActiveIntergenicRegion 0 77.55 60.31 9.71 40.67 59.28 28.16 18.65 40.66 24.22 18.91 8.54 28.70 13.51 8.79 12.66 8.52 10.41 5.67 6.37 12.20 1.85 3.61 4.91 51 IG44_SR4 SilentIntergenicRegion 0 105.83 67.42 16.12 70.03 52.90 18.48 10.90 55.84 28.12 22.85 19.03 43.96 8.30 10.37 18.75 28.12 22.60 10.09 15.44 9.17 0.00 6.41 16.26 52 IG44_AR3 ActiveIntergenicRegion 0 60.60 20.22 8.92 37.20 28.21 11.25 10.76 35.49 17.59 16.78 8.90 20.76 8.77 6.47 13.38 5.96 8.48 6.25 7.55 8.71 0.72 5.06 4.34