Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NID2 Gene 0 34.79 9.21 117.78 28.28 33.35 31.47 28.27 64.88 32.98 62.47 1.94 4.01 2.05 1.17 1.24 0.81 10.10 2.40 2.05 4.06 252.43 318.80 221.68 2 395707 Transcript 0 0.03 0.00 0.45 1.15 0.27 1.04 0.65 0.75 0.17 0.38 0.06 0.00 0.00 0.00 0.14 0.00 0.13 1.66 0.46 0.00 10.00 5.20 3.87 3 316204 Transcript 0 0.84 0.41 1.59 0.32 0.35 2.33 1.77 1.63 1.16 1.35 0.00 0.00 0.00 0.00 0.22 0.00 1.07 0.00 0.00 0.00 21.52 21.08 74.34 4 216286 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 0.00 1.84 0.00 0.00 6 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 1.68 0.82 3.19 0.63 0.71 4.66 3.53 3.25 2.33 2.71 0.00 0.00 0.00 0.00 0.44 0.00 2.15 0.00 0.00 0.00 43.04 42.16 148.68 8 E2_Ab KnownBoundary 0 3.19 2.57 33.50 4.89 15.11 7.67 6.23 20.41 18.46 17.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 113.30 154.49 415.55 9 ER2b ExonRegion 0 3.17 0.22 16.12 1.98 5.76 1.83 1.75 19.85 7.35 10.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 96.33 53.13 119.38 10 E2_Ac KnownBoundary 0 3.78 0.00 15.46 1.83 0.00 0.00 0.00 16.06 0.00 14.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 4.42 0.00 113.24 20.51 23.22 11 ER2c ExonRegion 0 1.18 0.49 27.15 4.54 0.65 0.68 1.68 19.70 13.71 21.70 0.52 0.00 0.00 0.42 0.65 0.00 3.46 0.78 0.00 0.00 211.09 155.51 334.30 12 E2a_E3a KnownJunction 0 3.63 2.83 32.49 3.20 3.65 7.55 0.00 25.47 10.04 18.75 2.05 0.00 0.00 0.00 0.00 0.00 8.42 0.00 0.00 0.00 179.83 113.22 236.46 13 ER3a ExonRegion 0 4.64 0.69 34.86 5.32 4.96 21.48 13.40 21.25 9.62 27.65 0.77 0.00 0.00 0.26 0.00 0.00 7.52 0.00 1.13 1.24 219.36 132.80 119.12 14 E3_Da KnownBoundary 0 10.52 6.25 24.72 7.19 0.00 2.44 10.02 20.00 12.21 42.87 0.00 0.00 0.00 2.47 0.00 0.00 4.11 1.74 0.00 3.13 171.43 281.92 166.71 15 E3a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3b ExonRegion 0 6.43 1.31 23.05 3.33 4.24 5.52 8.95 16.31 14.91 24.11 0.63 0.00 1.22 0.19 0.00 0.00 3.04 0.00 0.00 0.24 200.21 174.64 142.55 17 E3b_E4a KnownJunction 0 6.15 2.83 30.90 1.83 0.00 2.50 2.21 14.01 21.56 30.35 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 198.92 205.50 132.65 18 ER4a ExonRegion 0 11.10 3.82 40.20 9.56 14.48 19.49 13.13 30.89 27.63 31.89 1.23 0.00 2.54 0.29 0.00 0.00 6.93 0.00 0.00 0.47 291.18 281.04 202.97 19 E4a_E5a KnownJunction 0 5.78 3.22 51.65 13.42 25.38 8.69 27.20 24.97 27.40 39.19 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 313.95 266.24 181.99 20 ER5a ExonRegion 0 13.15 6.27 50.79 14.92 15.46 23.36 15.83 46.50 29.91 47.49 1.01 1.33 1.30 0.68 0.21 0.00 6.01 1.74 0.00 2.16 295.65 331.59 249.37 21 E5_Da NovelBoundary 0 6.45 3.35 18.63 4.13 11.46 26.01 16.83 18.32 9.14 8.65 0.00 0.00 0.00 0.00 0.00 0.00 4.21 0.00 0.00 0.00 41.27 58.48 95.78 22 E5a_E6a KnownJunction 0 24.23 8.49 41.01 11.65 27.67 31.57 18.81 52.04 22.77 59.61 0.00 0.00 0.00 0.00 4.45 0.00 8.23 2.03 0.00 0.00 248.16 213.70 169.28 23 ER6a ExonRegion 0 15.41 6.09 49.83 13.77 21.38 26.60 19.05 52.46 26.48 57.21 0.55 1.12 0.00 0.23 0.11 0.00 17.71 2.38 0.00 0.30 343.76 365.19 282.68 24 E6a_E7a KnownJunction 0 24.75 5.85 71.17 27.74 33.79 12.38 35.42 70.89 30.12 81.79 0.00 0.00 0.00 0.00 0.00 0.00 9.26 5.10 0.00 0.00 407.67 402.43 255.32 25 ER7a ExonRegion 0 17.20 4.15 74.40 15.51 15.41 18.40 12.74 45.99 31.79 61.16 0.00 0.00 0.00 0.00 0.00 0.00 9.84 1.07 0.00 0.00 334.36 334.42 201.24 26 E7a_E8a KnownJunction 0 20.52 5.92 61.94 14.78 23.94 38.95 11.66 46.09 26.97 70.43 0.00 0.00 0.00 0.00 0.00 0.00 8.13 0.00 0.00 0.00 392.60 308.25 204.53 27 ER8a ExonRegion 0 15.87 3.56 60.66 14.42 12.71 26.90 13.68 44.22 28.41 72.83 0.00 0.00 0.00 0.00 0.00 0.00 8.25 0.00 0.00 0.00 378.67 307.84 204.10 28 ER8b ExonRegion 0 15.20 4.94 79.86 14.89 14.83 28.21 18.46 50.44 25.60 67.47 0.00 0.78 0.00 0.29 0.00 0.00 8.84 1.20 0.00 0.81 344.31 333.67 195.94 29 E8a_E9a KnownJunction 0 13.41 3.22 102.30 12.35 28.69 75.13 21.07 50.11 24.68 71.83 0.00 0.00 0.00 0.00 0.00 0.00 26.46 3.90 0.00 2.81 457.03 384.06 268.72 30 ER9a ExonRegion 0 20.02 4.12 110.82 17.03 17.68 28.00 16.61 68.48 37.64 83.39 0.49 0.78 0.98 0.42 0.61 0.00 16.36 0.79 0.81 2.30 426.64 445.70 361.62 31 E9a_E10a KnownJunction 0 29.71 2.96 112.77 18.88 8.66 29.64 32.46 66.66 46.30 67.32 0.00 0.00 0.00 2.41 0.00 0.00 16.46 0.00 0.00 0.00 451.84 308.86 259.42 32 ER10a ExonRegion 0 25.00 5.66 95.31 18.60 34.52 42.51 33.75 71.49 39.04 73.21 1.00 1.57 0.00 0.52 0.53 0.00 7.95 2.07 0.70 1.41 380.25 429.80 341.16 33 E10a_E11a KnownJunction 0 28.00 0.00 83.02 10.39 15.53 36.12 40.63 57.09 27.31 74.54 2.53 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 320.01 404.51 315.84 34 ER11a ExonRegion 0 23.75 5.89 101.81 22.65 11.33 33.17 27.35 59.04 27.88 68.22 1.02 0.00 0.00 0.00 0.00 0.00 4.56 0.90 0.00 1.46 353.54 367.74 264.07 35 E11a_E12a KnownJunction 0 71.27 6.38 117.03 21.14 19.10 61.10 40.50 66.21 28.15 70.59 2.11 0.00 0.00 0.00 0.00 0.00 12.62 2.57 0.00 0.00 418.05 544.67 386.87 36 ER12a ExonRegion 0 38.97 6.75 131.75 23.92 16.01 33.07 23.43 66.47 32.42 72.13 0.90 1.41 0.00 0.00 0.00 0.00 11.36 0.59 0.00 0.69 380.40 412.68 285.65 37 E12a_E13a KnownJunction 0 21.41 3.35 110.11 21.44 17.83 39.07 17.09 69.50 23.38 51.87 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 2.75 354.29 412.47 368.43 38 E12a_E14a NovelJunction 0 0.00 0.00 21.11 3.70 3.65 16.47 6.67 22.47 6.19 18.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85.31 179.78 58.30 39 E13_Aa NovelBoundary 0 28.75 0.00 8.81 0.00 0.00 6.81 0.00 2.22 4.69 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.61 16.78 10.84 40 ER13a ExonRegion 0 17.24 5.62 124.60 24.58 13.21 24.40 11.44 61.13 26.61 51.28 0.00 0.00 0.00 0.00 0.00 0.00 8.64 1.95 0.00 0.18 316.03 250.83 241.89 41 E13a_E14a KnownJunction 0 36.52 11.38 143.99 40.82 10.95 33.45 10.02 76.93 40.51 64.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 377.09 384.24 331.72 42 ER14a ExonRegion 0 17.69 6.74 155.35 38.12 19.49 26.41 20.46 72.21 39.06 70.06 0.00 0.00 0.00 0.00 0.87 0.00 9.27 1.20 1.35 0.83 384.12 425.87 308.32 43 E14a_E15a KnownJunction 0 40.75 2.89 212.59 54.27 31.07 18.11 17.09 83.79 54.63 82.33 0.00 0.00 0.00 0.00 0.00 0.00 7.85 2.40 0.00 0.00 384.01 536.34 415.29 44 ER15a ExonRegion 0 22.95 6.67 145.46 30.86 17.10 23.40 14.23 63.64 27.40 64.30 0.42 0.00 0.00 0.00 0.89 0.00 7.87 2.08 0.00 0.50 306.98 337.04 238.73 45 E15a_E16a KnownJunction 0 30.89 5.99 130.42 20.14 11.29 15.39 11.13 60.67 9.69 53.86 0.00 0.00 0.00 0.00 0.00 0.00 7.95 1.82 0.00 0.00 188.85 162.70 153.74 46 ER16a ExonRegion 0 17.35 2.75 104.15 19.71 13.01 21.11 14.67 56.92 20.66 63.22 1.11 0.00 0.44 0.00 0.94 0.00 5.55 0.74 0.73 0.49 243.11 245.39 178.25 47 E16a_E17a KnownJunction 0 29.34 0.00 116.35 24.37 3.65 27.82 20.14 59.80 12.01 88.86 4.21 0.00 5.84 0.00 0.00 0.00 7.57 0.00 0.00 0.00 267.68 227.73 154.59 48 ER17a ExonRegion 0 25.73 4.28 98.79 26.57 22.38 26.45 16.04 45.10 13.28 73.23 1.91 2.14 0.69 0.49 1.23 0.00 7.03 1.33 0.96 1.28 258.42 219.19 184.49 49 E17_Da KnownBoundary 0 0.00 0.00 1.63 5.23 3.99 0.00 2.03 5.05 1.74 5.45 0.00 0.00 0.00 0.00 5.93 0.00 3.93 2.53 0.00 0.00 28.66 14.27 16.30 50 E17a_E18a KnownJunction 0 33.19 0.00 149.46 28.97 27.33 46.62 18.37 50.93 11.31 67.21 2.42 0.00 5.84 0.00 0.00 0.00 9.35 0.00 0.00 0.00 273.30 270.90 182.34 51 ER17b ExonRegion 0 0.09 0.00 1.34 3.45 0.80 3.13 1.96 2.25 0.50 1.15 0.17 0.00 0.00 0.00 0.42 0.00 0.39 1.28 1.39 0.00 28.16 15.60 11.60 52 I17_SR3 SilentIntronRegion 0 14.24 14.85 16.82 26.15 11.99 5.59 13.97 14.01 15.02 12.05 3.30 4.76 2.47 1.57 4.39 2.85 0.97 1.28 4.46 9.76 10.59 41.82 16.71 53 I17_AR3 ActiveIntronRegion 0 11.65 20.54 10.12 11.19 13.52 8.43 19.49 9.45 3.44 6.35 3.55 6.63 3.93 3.69 3.21 4.10 4.55 6.33 2.90 8.78 18.21 23.01 17.51 54 E18_Aa NovelBoundary 0 25.49 26.38 79.54 36.63 31.32 10.28 19.12 44.40 36.49 29.33 5.37 5.70 6.33 5.36 14.59 17.17 4.77 16.00 17.79 24.54 39.11 85.11 48.40 55 ER18a ExonRegion 0 53.01 15.63 190.99 58.59 40.03 51.40 32.48 96.97 41.78 97.89 5.34 0.00 5.27 4.37 8.19 8.16 28.44 6.50 9.97 10.07 316.23 263.50 228.40 56 E18_Da NovelBoundary 0 3.78 20.65 21.73 39.16 23.85 18.97 34.67 36.35 32.18 9.43 2.21 18.46 12.82 4.83 0.00 12.13 0.00 22.01 17.13 12.46 8.65 10.47 8.62 57 E18a_E19a KnownJunction 0 85.64 5.72 221.34 52.01 42.44 49.57 22.52 101.49 35.47 102.34 0.00 0.00 0.00 0.00 6.06 0.00 28.33 0.00 0.00 0.00 329.03 393.67 281.44 58 I18 Intron 0 11.09 12.50 28.34 28.45 18.61 9.06 14.95 25.44 30.24 9.47 3.51 5.75 6.95 3.81 5.38 7.79 7.32 12.59 8.03 13.94 7.11 13.44 16.27 59 I18_AR1 ActiveIntronRegion 0 11.14 12.55 28.44 28.56 18.68 9.09 15.00 25.54 30.36 9.51 3.52 5.77 6.98 3.83 5.41 7.82 7.35 12.64 8.06 13.99 7.14 13.49 16.33 60 E19_Aa NovelBoundary 0 24.15 24.07 17.80 28.50 23.51 13.86 8.48 22.63 43.03 12.79 11.74 0.00 0.00 4.41 0.00 8.29 26.18 20.15 31.34 23.52 0.00 7.84 11.35 61 ER19a ExonRegion 0 80.71 15.90 233.90 50.48 56.36 50.64 54.07 107.91 57.21 95.28 3.99 3.17 4.42 3.98 8.21 1.76 23.32 7.90 2.85 14.52 334.96 360.32 289.24 62 E19_Da NovelBoundary 0 10.00 12.76 6.95 37.92 26.83 8.29 21.82 20.87 19.82 14.00 7.95 0.00 8.28 4.71 0.00 0.00 9.16 13.80 16.38 17.58 18.35 14.33 3.16 63 E19a_E20a KnownJunction 0 84.09 8.02 265.96 51.38 68.08 43.38 30.96 85.93 51.59 79.51 0.00 0.00 0.00 0.00 6.06 0.00 0.00 0.00 0.00 0.00 291.71 365.56 311.23 64 I19 Intron 0 17.86 26.73 21.94 44.73 29.72 25.56 26.46 42.85 48.48 21.66 4.94 9.19 6.83 5.67 5.48 5.97 7.62 10.57 11.74 19.07 8.42 35.52 15.58 65 I19_AR1 ActiveIntronRegion 0 9.52 14.90 19.46 38.12 20.97 17.89 20.69 30.76 39.97 15.78 3.63 7.12 8.83 6.99 8.57 4.60 11.20 12.10 10.00 13.92 8.41 23.28 10.19 66 I19_SR1 SilentIntronRegion 0 22.24 36.13 38.04 50.15 41.65 26.10 29.21 45.65 47.18 21.66 5.24 11.11 7.29 4.01 6.75 4.62 5.60 8.22 11.79 17.56 5.96 36.81 15.52 67 I19_AR2 ActiveIntronRegion 0 19.40 27.45 16.10 46.42 28.34 29.06 28.31 47.54 54.20 24.64 5.47 9.39 6.25 6.28 4.08 7.34 7.74 11.66 12.83 22.40 9.98 40.64 18.13 68 E20_Aa NovelBoundary 0 34.67 20.52 19.13 46.41 44.82 35.43 34.40 48.43 72.94 24.85 12.32 39.76 7.30 4.24 0.00 3.50 13.00 3.69 8.38 17.19 27.80 42.68 24.67 69 ER20a ExonRegion 0 81.81 18.78 287.05 76.11 96.24 74.78 57.79 135.37 63.55 115.95 8.21 15.13 4.99 3.45 4.94 4.80 14.83 9.94 17.48 14.41 280.96 490.05 354.70 70 E20_Da NovelBoundary 0 2.89 27.50 16.97 34.49 20.88 25.16 24.91 16.63 50.23 24.63 5.05 25.51 7.47 2.41 9.89 3.93 4.39 13.51 8.47 22.31 2.84 10.78 3.59 71 E20a_E21a KnownJunction 0 104.69 15.33 377.10 80.18 59.76 40.49 69.38 122.44 48.49 109.89 2.05 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 220.36 442.04 487.08 72 I20 Intron 0 4.59 16.87 7.49 20.49 17.66 14.69 14.17 18.45 37.91 16.19 3.92 21.66 7.91 4.80 2.32 4.62 3.89 7.03 6.01 19.46 0.73 10.31 3.60 73 I20_AR1 ActiveIntronRegion 0 4.71 15.36 8.28 25.74 18.01 20.12 15.62 20.51 43.87 18.76 3.80 25.06 8.87 5.07 3.19 6.30 4.89 9.33 8.23 23.18 0.57 10.60 4.35 74 I20_SR1 SilentIntronRegion 0 6.18 26.24 7.58 16.07 20.74 7.21 15.81 20.29 37.60 15.19 3.60 24.46 6.86 5.12 1.03 1.62 2.57 4.45 2.77 16.21 0.82 12.49 3.08 75 E21_Aa NovelBoundary 0 2.89 12.23 7.33 15.35 7.47 7.33 10.78 22.02 30.56 8.62 4.79 5.85 0.00 4.83 0.00 4.36 0.00 24.21 0.00 29.66 0.00 8.70 3.16 76 ER21a ExonRegion 0 107.45 21.93 294.33 79.23 89.25 60.44 73.92 124.87 66.52 130.29 6.24 8.80 4.77 4.81 0.00 1.22 20.10 11.50 7.86 11.38 321.88 556.55 364.19 77 E21_Da NovelBoundary 0 6.37 6.05 15.32 20.81 11.38 13.63 14.40 19.39 39.35 11.28 8.05 0.00 6.82 10.12 0.00 0.00 8.32 26.28 0.00 31.32 5.56 14.57 4.10 78 E21a_E22a KnownJunction 0 146.32 28.55 271.31 59.47 72.75 43.16 77.20 114.80 24.62 79.57 0.00 0.00 0.00 0.00 0.00 0.00 8.88 0.00 0.00 0.00 207.88 359.62 206.41 79 I21 Intron 0 4.53 12.26 6.66 8.22 15.49 17.74 17.43 16.14 22.62 10.17 4.45 9.35 5.34 2.57 0.87 4.71 4.71 8.47 7.33 21.10 4.02 9.92 5.59 80 I21_AR1 ActiveIntronRegion 0 4.55 12.30 6.68 8.24 15.54 17.80 17.49 16.19 22.69 10.20 4.46 9.38 5.36 2.58 0.87 4.73 4.73 8.50 7.35 21.16 4.03 9.95 5.61 81 E22_Aa NovelBoundary 0 11.19 12.63 8.93 8.96 16.81 33.11 26.59 4.76 28.15 17.78 4.74 6.30 6.01 12.30 0.00 3.50 0.00 14.63 3.67 26.97 0.00 5.76 8.62 82 ER22a ExonRegion 0 158.50 24.04 272.27 72.64 88.73 64.99 71.62 124.57 62.66 114.27 6.98 5.98 5.23 2.40 1.85 2.58 16.62 5.97 3.27 15.18 258.40 490.62 357.54 83 E22_Da NovelBoundary 0 0.00 12.17 8.37 8.32 3.57 18.74 7.91 0.00 26.94 13.24 2.68 11.85 6.17 6.71 0.00 4.19 13.09 21.06 12.80 33.56 5.56 6.98 7.94 84 E22a_E23a KnownJunction 0 111.95 21.11 212.44 62.23 61.80 79.50 49.77 116.57 28.44 83.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 146.84 311.25 154.93 85 I22 Intron 0 3.15 8.21 4.27 9.49 4.55 10.13 14.35 11.49 20.34 4.73 5.34 4.44 7.27 2.44 0.44 2.53 11.22 9.76 5.42 14.47 3.28 9.74 5.62 86 I22_SR1 SilentIntronRegion 0 3.34 8.60 4.48 9.99 4.83 10.62 15.21 12.05 21.50 4.98 5.60 4.71 7.72 2.57 0.46 2.68 11.89 10.33 5.64 15.27 3.48 10.25 5.96 87 E23_Aa NovelBoundary 0 0.00 3.16 1.51 6.69 7.89 17.32 14.22 16.96 30.87 10.93 2.16 19.66 0.00 2.47 0.00 0.00 7.67 9.58 0.00 14.19 0.00 9.25 0.00 88 ER23a ExonRegion 0 86.13 27.80 236.31 61.91 99.94 58.04 72.93 125.17 60.84 85.40 5.11 20.47 8.23 3.75 2.45 2.42 12.15 3.10 5.32 13.16 57.69 433.54 105.37 89 IG34 Intergenic 0 9.16 14.68 1.76 5.86 12.87 3.53 8.28 1.24 7.08 3.29 1.86 6.86 1.86 0.64 0.99 2.86 1.59 0.00 4.60 7.17 4.24 29.07 9.89 90 IG34_AR1 ActiveIntergenicRegion 0 9.34 14.96 1.79 5.98 13.12 3.60 8.44 1.26 7.22 3.35 1.90 6.99 1.89 0.66 1.00 2.91 1.62 0.00 4.69 7.30 4.32 29.57 10.08