Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACTN1 Gene 0 155.27 209.49 354.79 97.97 172.13 205.13 139.57 316.11 213.74 365.31 334.87 19.24 69.44 205.25 155.59 19.62 100.96 395.97 154.83 253.08 1263.88 1253.15 1222.43 2 193403 Transcript 1 218.71 161.09 681.64 124.96 419.61 389.55 285.11 497.82 225.17 552.90 567.09 31.21 26.62 272.12 324.00 49.90 159.89 581.18 300.53 343.30 1131.27 1680.49 2110.77 3 438964 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 394419 Transcript 0 0.00 5.53 0.00 12.42 0.00 19.99 4.50 21.56 37.96 12.65 0.00 0.00 0.00 0.00 4.45 0.00 0.00 7.54 3.95 18.15 2.59 2.94 8.19 5 376839 Transcript 0 6.97 3.83 6.28 1.79 5.33 5.11 4.62 13.06 7.08 10.93 3.30 1.13 1.32 5.37 4.43 0.13 2.15 7.94 0.61 4.72 19.22 13.09 20.06 6 ER1a ExonRegion 0 24.67 20.57 7.92 0.65 24.31 99.70 73.00 16.91 12.37 17.21 43.79 0.00 1.54 79.73 38.67 8.99 29.94 84.35 126.37 24.80 207.79 380.68 733.59 7 E1_Ab KnownBoundary 0 49.05 29.53 39.00 3.10 32.85 161.90 63.68 76.48 36.14 69.20 36.69 0.00 6.17 23.19 44.50 12.39 38.15 309.20 127.72 59.63 367.64 361.46 859.86 8 ER1b ExonRegion 0 25.54 22.97 88.69 16.62 53.02 78.61 53.96 99.74 71.50 116.18 145.26 4.07 29.06 121.43 70.03 17.13 60.46 230.60 158.12 124.83 685.81 577.03 952.57 9 E1a_E2a KnownJunction 0 41.71 87.22 237.25 60.57 141.43 361.27 248.95 242.50 174.51 288.58 427.00 23.86 44.96 170.46 79.98 29.82 136.33 317.08 125.46 262.51 1529.61 858.62 770.57 10 ER2a ExonRegion 0 58.32 83.78 228.88 52.65 79.67 227.26 151.88 232.65 190.35 301.97 410.33 25.37 54.49 231.22 112.37 36.52 135.25 418.83 158.27 297.02 1604.32 1200.38 977.72 11 E2a_E3a KnownJunction 0 102.09 62.75 319.03 57.27 55.43 108.97 96.80 315.33 253.27 371.04 381.47 24.91 124.18 219.26 138.33 35.20 99.58 484.59 185.70 396.67 1525.41 1259.02 1199.86 12 I2_AR1 ActiveIntronRegion 0 63.68 7.44 9.53 2.73 17.20 1.48 6.96 11.25 6.36 7.44 0.00 0.00 0.69 0.36 2.98 0.00 0.89 8.66 7.24 9.55 7.46 2.49 15.86 13 ER3a ExonRegion 0 89.95 63.19 306.95 88.09 108.08 150.23 123.15 341.60 252.06 434.77 495.34 39.65 79.81 294.36 162.88 35.69 164.14 592.43 225.44 416.35 2013.68 1627.66 1624.60 14 E3a_E4a KnownJunction 1 138.77 51.90 405.81 102.62 163.75 251.62 172.15 409.14 301.65 550.24 541.98 31.36 100.81 364.53 135.73 23.58 205.24 747.86 318.60 447.80 2086.96 2207.84 2013.46 15 ER4a ExonRegion 0 74.76 78.30 326.57 99.43 141.60 232.13 164.03 367.11 280.04 500.64 594.24 30.51 100.38 316.98 140.93 32.08 155.03 670.69 273.32 426.92 2099.12 1828.90 1818.96 16 E4a_E5a KnownJunction 1 72.75 106.56 320.63 134.91 168.08 233.10 173.21 408.19 283.85 521.42 446.90 74.72 106.32 315.38 209.16 16.66 147.55 628.23 251.40 414.82 2148.37 1599.91 1723.23 17 ER5a ExonRegion 0 81.00 94.63 330.22 108.01 134.88 269.07 161.91 372.07 286.60 511.47 500.25 38.77 97.05 318.46 157.52 31.58 183.16 533.12 255.41 404.88 2090.97 1862.36 1816.05 18 E5a_E6a KnownJunction 0 146.84 142.28 422.46 111.34 187.10 304.77 197.50 442.20 316.46 599.56 589.89 51.47 94.47 287.13 177.14 14.95 170.27 662.18 255.54 442.05 2301.64 2211.39 2061.26 19 ER6a ExonRegion 0 75.71 105.54 352.22 102.35 110.89 229.41 178.70 354.57 263.55 489.32 465.46 21.21 104.13 286.48 159.83 17.23 158.74 510.28 225.48 386.29 1940.63 1596.58 1692.29 20 E6a_E7a KnownJunction 0 73.35 107.88 366.93 104.88 118.76 174.33 226.20 378.70 250.14 481.23 475.33 25.06 145.77 306.55 185.67 18.54 167.84 548.06 254.31 387.34 1899.72 1426.07 1819.09 21 ER7a ExonRegion 0 70.34 91.26 356.27 99.67 125.60 240.12 182.22 383.78 272.67 503.85 514.01 39.07 103.92 316.05 155.89 18.92 157.48 608.45 265.28 413.18 2070.73 1673.96 1761.59 22 E7a_E8a KnownJunction 0 94.68 111.76 439.52 113.77 219.35 313.74 210.13 419.28 296.44 524.45 549.03 19.21 99.83 374.30 231.78 26.83 195.32 742.10 326.60 496.64 2343.83 1987.03 2198.10 23 ER8a ExonRegion 0 81.90 92.46 433.15 125.04 137.33 254.68 146.28 348.99 253.18 460.30 521.30 27.29 116.98 314.59 176.30 19.15 147.96 727.45 251.50 381.49 1875.84 1619.26 1940.57 24 E8_Da NovelBoundary 0 2.96 2.76 32.44 32.66 3.40 19.65 21.11 37.62 26.97 29.01 9.79 0.00 6.49 5.30 9.64 8.54 0.00 75.78 21.08 35.28 66.29 34.29 98.51 25 E8a_E9a KnownJunction 0 54.82 70.12 387.18 122.86 162.82 186.31 134.70 322.06 211.66 390.04 342.35 18.76 61.03 224.26 182.46 15.30 112.20 498.77 158.50 217.06 1396.72 1124.80 1436.66 26 I8_AR2 ActiveIntronRegion 0 31.14 15.55 24.30 14.73 18.61 25.53 22.04 25.25 18.84 18.57 6.37 0.59 1.14 3.07 6.55 1.14 2.65 55.22 15.03 34.84 57.17 29.90 93.27 27 I8_SR2 SilentIntronRegion 0 62.83 32.66 20.40 12.66 31.79 21.86 20.15 14.33 15.02 17.81 4.81 2.98 2.14 1.85 4.36 0.31 3.10 28.70 14.01 21.90 41.23 26.10 66.83 28 I8_AR7 ActiveIntronRegion 0 8.47 20.84 12.25 4.09 11.04 43.32 29.62 8.64 8.65 10.32 0.00 4.33 9.38 3.05 0.00 0.00 0.00 18.48 3.19 14.36 8.81 18.23 41.85 29 I8_AR8 ActiveIntronRegion 0 10.58 35.59 12.25 4.09 13.38 52.49 40.22 8.64 8.65 10.32 0.00 4.33 9.38 4.87 0.00 0.00 0.00 20.33 3.19 18.62 8.81 32.03 49.56 30 I8_AR9 ActiveIntronRegion 0 8.77 30.21 12.25 4.09 11.47 44.40 34.80 8.64 8.65 10.32 0.00 0.31 10.39 2.90 0.00 0.00 0.00 20.33 3.19 14.89 7.24 27.68 36.08 31 ER9a ExonRegion 0 75.92 86.98 351.69 84.24 137.59 231.69 153.00 301.59 229.81 435.81 478.17 24.35 64.55 266.46 164.59 19.85 114.11 545.80 176.02 316.08 1766.76 1403.78 1616.10 32 E9a_E10a KnownJunction 1 120.84 86.10 380.94 79.38 134.89 262.75 117.78 334.06 239.03 443.01 443.85 18.76 35.06 212.61 109.15 3.25 125.29 623.25 208.10 310.13 1790.56 1566.66 1682.85 33 ER10a ExonRegion 0 73.90 88.06 360.81 88.39 143.15 206.71 143.31 323.77 236.14 404.84 397.77 14.09 54.66 239.95 143.57 15.72 106.21 568.29 158.55 296.16 1577.42 1272.38 1477.49 34 E10a_E11a KnownJunction 0 75.79 128.00 362.29 77.08 195.59 274.16 172.72 326.50 246.99 402.26 421.63 6.30 74.51 227.56 145.50 16.58 149.79 524.43 114.64 371.68 1713.70 1258.96 1508.11 35 ER11a ExonRegion 1 76.54 80.53 342.39 98.79 126.45 224.07 122.43 315.37 255.03 408.09 426.87 6.79 63.16 244.40 182.64 18.70 134.24 545.59 199.56 340.78 1689.57 1480.38 1502.99 36 E11a_E12a KnownJunction 0 116.98 140.83 441.41 129.09 198.39 237.65 139.42 321.16 271.35 465.68 449.01 13.50 128.08 253.28 252.06 11.28 146.14 438.83 211.49 427.86 1968.10 1375.43 1395.26 37 ER12a ExonRegion 1 96.98 117.89 334.65 98.74 123.17 212.99 132.71 286.99 247.15 391.59 404.96 7.05 72.74 228.90 173.25 17.14 120.06 496.70 162.24 306.40 1553.57 1370.46 1437.11 38 E12a_E13a KnownJunction 1 170.03 171.35 404.78 134.68 257.56 360.19 212.11 374.55 282.29 506.46 556.83 25.21 80.03 321.74 268.50 7.60 139.69 754.45 328.10 395.26 1929.62 1865.42 2067.67 39 ER13a ExonRegion 0 119.53 118.56 367.93 115.37 201.37 318.79 191.77 321.73 268.58 435.12 448.24 13.03 83.47 271.53 220.02 22.47 132.37 670.65 197.32 309.25 1691.48 1567.23 1732.59 40 E13a_E14a KnownJunction 0 122.32 97.22 459.45 106.41 157.56 290.40 176.96 378.99 311.37 500.84 434.90 6.15 46.26 268.70 238.21 34.86 141.00 569.69 134.87 315.75 1753.61 1564.21 1628.90 41 ER14a ExonRegion 0 96.50 123.59 463.25 102.98 133.26 263.48 146.15 342.83 284.20 473.48 503.54 13.33 76.44 264.20 216.57 26.03 132.46 683.44 198.96 314.61 1724.72 1549.81 1689.76 42 E14a_E15a KnownJunction 0 102.54 174.51 533.13 148.50 181.49 233.73 169.89 395.26 347.22 517.79 543.35 22.96 97.88 287.89 212.00 37.94 150.91 813.44 197.37 377.43 1828.67 1793.90 1879.10 43 ER15a ExonRegion 0 170.78 156.92 393.41 95.67 200.75 289.72 198.39 294.85 219.50 354.42 377.00 19.45 78.45 220.25 201.41 17.98 125.88 443.24 139.76 289.59 1517.10 1297.62 1308.78 44 E15a_E16a KnownJunction 0 208.11 137.41 447.74 145.74 290.66 379.55 219.36 346.05 209.03 383.62 327.98 18.31 52.59 245.57 218.43 28.54 123.61 545.11 141.18 271.90 1469.56 1372.24 1448.01 45 ER16a ExonRegion 0 137.53 102.69 481.97 129.43 139.02 235.70 135.83 340.13 244.46 408.75 399.29 13.53 71.98 254.95 253.42 28.25 143.31 481.70 163.23 313.25 1638.79 1497.97 1537.47 46 E16a_E17a KnownJunction 0 275.23 106.69 685.87 168.04 193.21 267.46 182.35 604.28 340.62 567.65 561.62 16.96 106.97 286.89 269.86 13.76 170.27 561.78 151.82 418.91 2058.79 1519.02 1767.44 47 ER17a ExonRegion 0 202.24 153.46 616.91 149.47 270.44 370.76 237.67 527.75 323.36 565.58 491.69 17.37 70.90 270.17 250.99 31.08 151.13 523.80 186.20 370.64 1854.81 1707.12 1704.00 48 E17a_E18a KnownJunction 1 289.68 217.33 700.24 157.02 266.81 351.10 268.64 609.91 363.19 598.65 501.39 6.30 50.97 229.80 276.41 54.52 149.70 542.17 209.89 347.58 1718.34 1470.22 1782.55 49 ER18a ExonRegion 0 283.25 155.73 593.16 136.78 252.81 277.49 176.95 554.94 347.26 566.45 521.26 24.83 96.03 258.17 247.36 39.77 134.37 551.20 212.21 378.56 1865.31 1895.56 1843.55 50 E18a_E19a KnownJunction 1 166.40 204.17 557.58 119.23 172.41 261.21 113.81 516.05 324.04 536.86 459.64 42.76 19.32 244.51 191.85 45.89 93.13 525.63 189.84 314.54 880.82 1139.92 1178.01 51 E18a_E20a KnownJunction 0 24.97 2.76 112.77 20.18 3.65 22.77 18.33 58.04 33.97 42.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.40 0.00 0.00 660.52 402.92 151.09 52 ER19a ExonRegion 0 177.53 152.14 552.26 118.86 225.09 340.18 197.84 471.68 280.26 532.57 468.95 24.96 52.17 265.15 237.19 43.04 132.81 557.72 150.97 295.56 976.16 1300.45 1469.52 53 E19_Da NovelBoundary 0 29.12 32.49 38.59 23.14 21.65 100.96 28.75 61.41 82.23 42.44 19.32 6.30 0.00 4.71 8.90 0.00 0.00 96.54 9.32 58.10 109.78 128.77 157.67 54 E19a_E20a KnownJunction 0 0.00 5.53 0.00 12.42 0.00 19.99 4.50 21.56 37.96 12.65 0.00 0.00 0.00 0.00 4.45 0.00 0.00 7.54 3.95 18.15 2.59 2.94 8.19 55 E19a_E21a KnownJunction 1 218.71 161.09 681.64 124.96 419.61 389.55 285.11 497.82 225.17 552.90 567.09 31.21 26.62 272.12 324.00 49.90 159.89 581.18 300.53 343.30 1131.27 1680.49 2110.77 56 I19 Intron 0 23.91 17.40 34.25 30.96 31.40 90.11 14.52 70.63 88.82 42.18 16.54 0.39 3.57 10.31 9.96 0.65 3.62 89.90 14.67 49.70 161.41 187.84 203.55 57 I19_AR1 ActiveIntronRegion 0 24.01 17.47 34.40 31.09 31.54 90.49 14.58 70.93 89.21 42.36 16.61 0.39 3.59 10.36 10.00 0.65 3.64 90.29 14.74 49.92 162.10 188.65 204.43 58 ER20a ExonRegion 0 30.34 14.97 99.94 34.34 36.20 64.02 17.31 81.94 79.31 62.09 5.42 0.00 0.00 9.08 4.48 0.00 2.60 24.19 10.52 34.36 806.62 500.42 203.12 59 E20_Da NovelBoundary 0 37.64 29.73 45.44 26.74 24.02 159.51 16.03 67.32 82.93 34.92 16.27 0.00 6.82 9.18 20.27 0.00 12.34 98.08 24.19 37.46 143.69 177.09 203.59 60 E20a_E21a KnownJunction 0 28.97 0.00 109.58 34.39 79.88 30.55 12.19 79.23 97.25 67.61 2.68 0.00 0.00 2.47 10.63 0.00 0.00 15.25 4.80 11.31 950.26 490.73 179.35 61 I20 Intron 0 37.38 16.66 38.21 27.68 22.77 66.54 13.22 53.57 66.66 29.53 13.73 1.79 2.93 5.50 4.84 0.19 3.80 63.13 15.49 34.72 145.22 168.93 133.80 62 I20_AR1 ActiveIntronRegion 0 37.47 16.70 38.30 27.75 22.83 66.70 13.25 53.70 66.83 29.60 13.76 1.80 2.94 5.51 4.85 0.19 3.81 63.29 15.53 34.81 145.58 169.35 134.14 63 E21_Aa NovelBoundary 0 137.58 45.72 102.75 74.52 111.29 287.79 67.35 140.72 129.17 57.08 20.32 6.30 12.99 4.89 10.26 0.00 8.79 113.83 18.64 53.63 260.70 315.23 205.13 64 ER21a ExonRegion 0 200.56 124.15 688.87 191.34 272.45 336.27 181.27 592.14 355.99 601.43 431.98 19.77 76.60 263.43 239.95 39.20 133.01 510.26 219.87 323.42 1634.53 1889.41 1798.44 65 E21a_E22a KnownJunction 0 6.45 0.00 1.48 0.00 4.16 0.00 0.00 8.42 5.30 7.44 0.00 0.00 0.00 7.06 5.93 0.00 0.00 7.05 0.00 0.00 5.81 6.12 7.85 66 E21a_E22b KnownJunction 0 362.88 166.94 693.83 190.35 322.67 311.81 209.02 658.79 387.64 737.44 656.38 18.01 97.72 242.92 209.41 24.18 182.61 545.57 128.19 369.82 2632.21 1462.81 1353.35 67 ER22a ExonRegion 0 7.49 7.67 11.08 3.57 6.50 10.23 9.25 17.70 8.86 14.42 6.60 2.26 2.63 3.67 2.92 0.25 4.29 8.84 1.23 9.44 32.63 20.07 32.26 68 E22_Ab KnownBoundary 0 16.37 9.80 14.72 11.02 3.90 12.15 15.15 24.97 6.39 11.82 7.32 6.30 0.00 4.94 0.00 0.00 0.00 11.11 0.00 9.20 18.97 5.45 38.67 69 ER22b ExonRegion 0 368.61 216.54 509.45 141.14 193.55 269.02 137.42 493.67 307.67 499.24 448.37 27.43 65.54 237.98 204.58 21.71 132.37 542.19 192.59 259.20 1742.62 1311.03 1477.13 70 E22_Da KnownBoundary 0 693.68 547.93 594.30 173.07 263.33 283.13 134.83 482.46 293.60 483.35 427.27 36.16 66.55 390.61 320.05 27.26 138.29 548.39 211.58 267.94 1828.92 1190.26 1926.47 71 ER22c ExonRegion 1 321.55 689.46 337.72 116.15 297.51 126.13 136.58 292.95 151.95 278.11 124.12 27.81 90.90 115.49 117.45 4.77 30.15 72.77 61.16 120.31 314.33 983.96 425.09