Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EXOC5 Gene 0 20.89 58.66 19.51 40.80 53.64 55.55 67.19 43.38 79.93 77.54 85.24 144.39 97.55 81.17 30.00 54.04 76.38 32.91 27.34 65.41 22.72 70.20 31.47 2 413566 Transcript 0 22.82 129.71 45.03 121.90 98.73 130.78 114.03 119.32 230.84 243.91 230.06 577.54 273.68 286.42 78.00 201.06 241.61 48.62 87.16 155.70 38.92 235.57 77.51 3 340918 Transcript 0 3.02 8.42 4.20 9.83 7.64 9.43 8.13 10.12 18.35 18.35 25.27 48.24 37.86 25.06 9.33 15.29 24.29 5.54 6.37 12.61 2.36 18.45 6.08 4 ER1a ExonRegion 1 4.58 14.64 5.27 6.33 6.37 40.95 21.98 8.82 20.07 34.10 82.11 6.77 17.16 84.45 24.73 66.45 104.55 64.01 35.58 52.25 69.18 30.80 49.43 5 E1_Da NovelBoundary 0 0.00 0.00 1.09 2.83 0.00 0.00 2.25 4.48 1.79 7.20 4.63 0.00 0.00 14.48 0.00 0.00 8.60 18.94 4.52 5.18 8.09 8.02 4.10 6 E1a_E2a KnownJunction 0 13.41 11.97 8.43 12.82 7.81 2.78 20.62 26.33 56.10 84.05 66.07 39.16 13.64 199.54 60.20 139.28 89.76 219.33 63.34 81.11 59.99 77.34 94.50 7 ER2a ExonRegion 0 5.75 53.45 9.66 28.33 49.74 76.59 57.63 34.48 67.65 74.91 135.40 86.82 79.38 160.58 35.46 163.25 141.21 136.03 53.51 105.31 90.49 75.73 102.44 8 E2a_E3a KnownJunction 0 2.82 57.82 14.25 53.41 125.72 183.25 137.92 47.85 67.45 111.02 208.95 137.29 107.30 191.77 66.51 171.07 171.39 108.69 42.54 151.93 110.15 94.54 67.69 9 ER3a ExonRegion 0 10.65 89.18 17.10 54.75 71.99 146.83 119.54 72.09 128.83 141.60 271.72 230.87 161.20 307.43 62.63 198.11 284.99 115.42 66.61 191.78 122.02 128.32 98.56 10 E3a_E4a KnownJunction 1 8.96 129.32 33.23 63.10 64.60 95.12 78.52 69.99 128.07 185.70 308.08 343.91 221.90 337.04 46.85 229.68 282.37 126.93 50.26 189.07 164.45 150.14 158.69 11 E3a_E5a NovelJunction 0 0.00 0.00 1.30 3.43 0.00 2.61 0.00 0.00 1.79 2.66 2.00 5.85 6.33 5.47 0.00 0.00 13.28 5.10 0.00 8.88 0.00 5.94 0.00 12 ER4a ExonRegion 0 17.17 125.78 32.21 68.78 93.35 83.31 123.03 82.00 153.34 195.27 282.52 421.31 265.19 341.62 76.31 207.82 287.40 141.69 71.53 186.25 135.64 153.69 104.33 13 E4a_E5a KnownJunction 0 24.82 140.90 31.93 66.26 150.25 152.92 207.12 72.70 157.32 204.37 259.22 613.85 368.00 357.94 72.81 162.95 234.88 123.90 64.38 191.56 83.15 161.66 96.37 14 ER5a ExonRegion 0 22.01 197.16 31.24 59.78 119.05 165.01 155.80 73.98 158.02 202.05 311.40 527.06 336.17 304.21 60.30 173.02 248.53 98.81 91.30 229.95 82.25 167.42 84.71 15 E5a_E6a KnownJunction 1 9.19 155.89 34.53 59.57 102.21 150.99 143.18 61.61 127.89 146.64 248.80 588.04 427.57 244.45 38.45 116.55 194.76 43.57 37.93 198.40 52.26 141.33 33.21 16 E6a_E7a KnownJunction 0 24.52 211.28 17.42 80.31 173.68 157.86 259.81 60.91 141.98 167.40 225.00 573.49 319.46 241.98 101.00 140.39 171.95 86.80 62.68 179.99 57.45 227.67 92.02 17 ER6a ExonRegion 0 15.76 183.65 28.82 82.71 132.96 174.84 197.41 72.30 166.19 187.74 264.74 580.45 379.41 245.58 61.53 160.80 197.03 89.20 46.24 202.27 60.26 185.15 62.38 18 E7_Aa NovelBoundary 0 21.11 18.09 14.16 20.61 0.00 0.00 9.85 2.51 15.62 7.28 7.00 12.00 14.93 2.12 14.96 4.36 4.77 1.82 0.00 12.21 3.15 0.00 4.35 19 ER7a ExonRegion 0 21.86 163.44 39.85 79.88 119.19 99.63 165.77 73.54 197.79 212.91 278.81 615.10 387.65 247.29 66.17 141.64 219.99 75.72 60.32 231.72 47.44 200.17 75.26 20 E7_Da NovelBoundary 1 17.86 11.71 13.48 16.48 21.22 0.00 10.38 8.54 11.86 7.15 7.74 45.61 57.46 17.84 4.45 3.25 15.43 7.17 3.58 17.00 0.00 13.90 7.60 21 E7a_E8a KnownJunction 0 14.08 140.90 39.27 70.95 136.33 166.72 143.00 51.51 186.63 185.37 253.12 589.84 386.99 277.30 74.05 113.90 199.63 63.55 60.24 215.40 28.29 206.79 72.56 22 I7 Intron 0 4.85 6.80 4.10 13.09 10.48 5.69 18.33 7.99 15.21 9.22 7.85 27.39 23.01 8.31 6.19 4.40 7.88 3.91 2.89 8.53 1.47 8.56 3.93 23 I7_SR1 SilentIntronRegion 0 4.87 6.82 4.11 13.13 10.51 5.71 18.38 8.02 15.25 9.25 7.87 27.46 23.07 8.34 6.20 4.41 7.90 3.92 2.90 8.56 1.48 8.58 3.94 24 ER8a ExonRegion 0 18.25 129.06 43.08 72.75 155.79 147.80 150.64 63.45 187.74 185.77 271.89 578.90 392.71 269.64 56.22 128.33 216.54 81.71 78.64 192.20 43.63 186.04 65.13 25 E8a_E9a KnownJunction 0 30.75 170.30 34.12 86.27 204.50 140.03 194.89 67.94 157.58 154.40 271.96 617.90 365.40 260.41 52.54 156.54 208.51 75.90 78.87 223.07 55.72 224.73 54.89 26 ER9a ExonRegion 0 20.23 179.01 43.77 88.40 127.73 137.69 168.01 89.48 182.34 192.88 298.48 575.48 369.75 255.31 60.45 146.58 248.67 68.45 61.95 175.22 42.75 212.18 78.48 27 E9a_E10a KnownJunction 0 32.23 161.62 45.77 97.16 130.90 165.59 234.81 87.73 195.25 203.37 382.57 764.65 398.84 347.52 90.24 104.42 222.91 56.42 62.03 232.47 76.67 159.39 71.28 28 E10_Aa NovelBoundary 0 11.41 0.00 0.00 4.79 4.33 0.00 1.68 0.00 6.97 0.00 0.00 12.60 6.82 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 29 ER10a ExonRegion 0 30.47 119.56 42.61 113.81 122.76 100.68 139.38 96.50 220.36 225.82 353.21 525.74 332.31 293.77 68.34 135.68 289.84 57.44 77.91 167.26 51.72 217.84 76.49 30 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E10a_E11b KnownJunction 0 22.82 129.71 45.03 121.90 98.73 130.78 114.03 119.32 230.84 243.91 230.06 577.54 273.68 286.42 78.00 201.06 241.61 48.62 87.16 155.70 38.92 235.57 77.51 32 I10_AR2 ActiveIntronRegion 0 3.27 0.98 1.94 4.32 6.98 4.61 11.89 5.72 8.89 3.47 5.60 15.85 8.71 4.62 4.14 5.74 16.90 8.53 3.08 11.51 1.49 3.82 1.70 33 E11_Aa NovelBoundary 0 0.00 0.00 3.10 3.66 14.69 2.44 33.39 6.41 2.55 8.49 5.00 0.00 0.00 4.65 0.00 4.36 13.74 0.00 0.00 2.56 0.00 0.00 0.00 34 ER11a ExonRegion 0 6.05 16.85 8.40 19.66 15.29 18.86 16.27 20.25 36.70 36.70 50.53 96.49 75.71 50.12 18.65 30.57 48.57 11.09 12.74 25.23 4.72 36.91 12.17 35 ER11b ExonRegion 0 31.91 114.68 50.62 122.57 124.06 149.51 161.48 102.37 225.35 229.93 359.57 566.77 368.67 302.82 84.55 189.16 327.48 93.50 99.78 227.60 56.47 210.13 114.66 36 E11a_E12a KnownJunction 0 28.60 205.95 59.05 140.57 187.01 226.35 263.47 103.88 269.15 227.06 416.95 593.74 413.28 401.85 75.16 216.18 388.69 99.20 94.97 230.42 93.59 224.24 122.50 37 ER12a ExonRegion 0 23.75 154.07 61.38 84.91 132.03 168.99 183.76 99.95 220.65 209.57 302.79 539.19 347.73 302.47 83.71 191.28 330.87 92.76 113.19 223.69 82.04 208.00 102.50 38 E12a_E13a KnownJunction 0 48.53 139.12 77.91 88.43 220.54 260.30 241.44 116.20 238.31 236.92 339.19 584.29 304.53 282.07 114.35 243.95 355.77 93.27 76.71 241.10 100.20 279.53 174.57 39 ER13a ExonRegion 0 28.19 149.46 77.87 100.69 158.16 176.55 213.23 125.15 232.09 239.08 360.97 519.54 275.12 286.43 83.42 178.41 304.29 104.19 95.18 225.63 72.88 253.10 95.59 40 E13a_E14a KnownJunction 0 46.60 213.98 85.01 110.68 213.92 206.53 297.13 137.84 252.25 267.65 381.62 395.38 315.08 293.72 102.60 142.44 287.80 103.18 93.46 304.31 67.58 279.41 105.59 41 ER14a ExonRegion 0 41.47 222.15 66.14 106.59 182.11 170.85 238.17 125.98 218.18 217.11 281.15 449.87 286.29 234.37 69.82 162.78 236.05 89.55 58.57 223.49 42.38 232.05 86.76 42 E14a_E15a KnownJunction 0 16.82 210.42 72.26 110.44 129.20 226.35 220.90 141.71 202.46 269.37 253.38 376.02 287.81 196.07 73.80 90.23 258.25 59.44 39.81 196.16 37.68 168.82 56.94 43 ER15a ExonRegion 0 30.63 223.27 54.40 101.76 84.24 156.00 194.17 107.90 206.22 220.15 205.82 330.58 249.60 215.24 65.90 89.68 186.25 63.52 43.94 177.62 29.99 195.95 60.66 44 E15_Da NovelBoundary 0 2.74 0.00 0.00 3.93 3.65 0.00 12.59 2.55 3.21 1.67 2.16 7.65 8.28 7.36 0.00 3.67 0.00 1.70 0.00 5.62 2.78 5.82 12.04 45 E15a_E16a KnownJunction 0 31.41 251.67 61.65 117.77 130.39 106.30 243.34 106.67 236.89 236.33 179.05 286.74 248.68 204.25 53.40 151.16 168.58 43.03 29.84 190.15 4.88 210.95 54.29 46 ER16a ExonRegion 0 63.24 211.47 66.44 131.76 166.39 124.06 200.19 131.71 236.26 276.87 262.61 458.17 280.50 216.66 81.21 165.92 205.02 65.82 66.95 201.74 24.95 244.27 74.95 47 E16a_E17a KnownJunction 0 106.09 225.75 102.86 211.99 148.05 125.72 201.03 162.41 282.00 351.65 305.71 599.15 528.54 257.29 90.36 179.44 254.89 77.19 71.34 289.67 31.44 308.43 90.14 48 ER17a ExonRegion 0 81.79 247.29 87.14 176.64 200.69 208.65 248.86 155.68 309.38 327.64 425.34 604.06 454.82 292.15 131.38 253.36 336.63 150.16 152.29 307.03 78.81 324.92 123.14 49 E17a_E18a KnownJunction 0 85.94 214.83 107.68 191.75 187.95 234.35 233.66 188.90 401.47 386.49 736.71 640.86 411.50 300.90 179.37 254.98 563.35 170.04 198.41 427.09 119.23 292.88 117.55 50 ER18a ExonRegion 0 18.21 29.97 10.92 24.93 32.86 29.53 37.50 27.82 45.55 37.39 19.02 49.65 35.65 22.15 15.92 15.68 16.41 10.85 9.82 21.80 5.86 30.65 11.60 51 IG31_AR7 ActiveIntergenicRegion 0 14.53 19.15 5.45 14.39 20.93 13.42 13.61 19.10 24.24 18.34 1.93 14.96 6.39 7.19 5.00 3.95 3.93 6.32 2.99 7.98 1.22 12.47 2.60 52 IG31_AR3 ActiveIntergenicRegion 0 0.19 23.09 2.72 14.26 1.14 2.18 9.43 0.00 0.20 0.55 0.00 0.00 0.00 0.14 0.22 0.00 0.00 3.35 9.21 7.59 0.00 0.00 0.00