Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DHRS4 Gene 0 52.19 12.86 53.80 41.06 15.85 21.95 16.43 25.47 25.79 31.00 32.89 13.70 12.06 71.42 81.52 74.96 73.87 29.97 28.44 21.97 85.98 53.30 58.07 2 313250 Transcript 0 23.46 7.46 6.31 5.00 2.48 5.61 8.06 5.79 4.34 3.85 7.02 3.56 2.01 13.67 27.13 26.60 17.91 7.02 4.60 1.89 17.38 13.04 18.50 3 308178 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 382761 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 3.15 0.00 0.00 5 421831 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 397073 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 397075 Transcript 1 40.01 6.64 101.98 15.95 4.33 2.84 14.53 17.58 31.28 24.85 18.27 17.71 15.10 22.72 100.25 33.84 12.81 26.74 28.99 5.88 63.51 26.39 40.04 8 397074 Transcript 0 3.78 0.00 3.02 0.00 15.37 0.00 2.16 0.00 5.79 11.23 2.68 0.00 0.00 0.00 6.30 3.25 0.00 6.72 4.42 0.00 21.62 5.51 0.00 9 ER1a ExonRegion 1 27.75 11.75 8.71 4.09 4.46 7.95 12.50 2.30 7.27 2.80 9.88 4.33 0.00 17.50 50.61 47.88 34.48 6.36 9.20 3.55 32.08 25.00 33.93 10 ER1b ExonRegion 0 86.78 29.05 27.31 16.35 21.41 32.75 34.23 8.64 15.70 6.55 39.21 4.33 0.00 73.09 128.48 148.18 108.93 30.36 40.95 14.89 112.07 58.34 103.62 11 ER1c ExonRegion 1 134.52 37.28 40.44 22.71 36.87 55.42 56.64 8.64 21.00 12.36 51.76 4.33 0.00 111.70 156.67 183.94 135.70 46.19 52.74 28.61 158.67 85.89 141.61 12 ER1d ExonRegion 1 184.74 43.29 45.34 31.15 51.99 81.21 65.63 10.62 28.23 17.86 67.93 4.33 0.00 140.83 225.47 237.77 154.67 57.54 79.63 41.34 204.94 101.50 214.37 13 ER1e ExonRegion 0 116.82 26.50 46.94 25.78 25.67 56.38 33.47 21.51 30.54 31.09 48.46 8.53 9.42 86.70 111.34 141.98 110.48 81.41 62.90 61.57 148.24 83.04 168.09 14 E1_Da NovelBoundary 1 3.56 0.00 15.46 16.22 0.00 0.00 1.90 10.64 34.84 30.52 39.80 0.00 12.82 42.15 55.50 76.22 17.58 77.60 26.35 50.05 31.32 37.35 75.38 15 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I1_AR1 ActiveIntronRegion 0 4.24 13.33 7.65 7.76 5.36 11.69 3.38 7.04 18.76 12.76 7.39 2.09 2.81 15.07 15.05 19.50 19.84 28.47 16.25 33.02 42.53 14.04 23.01 17 ER2a ExonRegion 0 17.41 11.45 76.82 38.86 15.84 27.20 10.65 22.28 28.94 35.62 39.17 5.91 11.54 106.48 137.34 133.53 110.52 46.34 57.09 35.98 132.89 101.45 124.36 18 E2_Da NovelBoundary 0 3.48 2.63 8.72 8.69 0.00 19.08 14.49 15.90 1.65 7.60 2.68 6.15 0.00 7.12 5.56 8.37 4.02 3.90 18.45 0.00 6.24 8.76 8.37 19 E2a_E3a KnownJunction 1 6.00 0.00 77.97 27.80 45.50 59.11 50.52 12.69 27.17 35.22 18.74 18.91 13.80 39.14 66.51 15.89 63.96 18.12 25.88 22.75 105.02 87.32 30.99 20 E2a_E4a KnownJunction 0 2.82 0.00 0.00 1.27 0.00 2.33 0.00 0.00 1.59 1.26 0.00 0.00 0.00 0.00 9.39 0.00 4.39 4.35 0.00 0.00 2.66 6.25 0.00 21 E2a_E7a KnownJunction 0 3.78 0.00 3.02 0.00 15.37 0.00 2.16 0.00 5.79 11.23 2.68 0.00 0.00 0.00 6.30 3.25 0.00 6.72 4.42 0.00 21.62 5.51 0.00 22 ER3a ExonRegion 0 80.18 36.86 121.16 66.13 40.50 60.57 64.95 33.65 45.34 52.18 46.22 16.13 19.96 119.13 136.96 101.81 115.05 47.48 38.63 40.05 156.31 95.86 80.64 23 E3_Da NovelBoundary 1 0.00 0.00 0.00 0.00 3.31 0.00 2.25 0.00 4.34 1.67 0.00 13.95 0.00 0.00 0.00 0.00 0.00 2.07 4.24 0.00 0.00 0.00 0.00 24 E3a_E4a KnownJunction 0 120.84 21.51 50.44 52.54 32.68 25.21 25.84 11.01 34.17 32.21 22.16 0.00 13.64 73.46 100.87 92.28 96.12 13.76 8.47 23.33 122.32 33.86 32.95 25 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 3.15 0.00 0.00 26 E3a_E7a KnownJunction 1 40.01 6.64 101.98 15.95 4.33 2.84 14.53 17.58 31.28 24.85 18.27 17.71 15.10 22.72 100.25 33.84 12.81 26.74 28.99 5.88 63.51 26.39 40.04 27 ER4a ExonRegion 0 41.14 8.13 50.98 59.49 7.50 7.54 4.57 12.22 27.12 29.92 26.84 4.63 7.99 82.58 89.61 83.14 76.94 15.93 16.96 14.11 106.27 59.16 29.61 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5_Aa NovelBoundary 0 13.41 6.71 16.26 8.62 3.40 5.28 3.93 1.81 8.07 4.24 0.00 0.00 6.17 7.42 0.00 4.02 0.00 0.00 0.00 2.43 13.90 0.00 3.67 30 ER5a ExonRegion 1 28.90 1.80 47.53 66.55 0.00 2.93 2.55 15.36 28.36 33.17 24.35 0.92 0.00 34.79 46.09 29.21 75.86 10.23 5.08 12.85 112.47 35.62 3.28 31 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 68.09 9.44 62.63 87.37 30.80 25.50 15.35 19.87 34.68 39.14 40.16 22.55 20.36 91.61 122.82 95.81 101.84 21.98 24.40 19.12 135.42 63.72 43.68 34 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER7a ExonRegion 0 56.13 20.34 99.61 51.13 16.96 17.58 23.97 35.34 47.07 60.95 29.75 23.73 12.14 64.76 63.36 65.86 69.91 27.95 29.52 12.04 107.63 52.65 39.38 36 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 I7_SR1 SilentIntronRegion 0 18.08 1.42 5.09 20.18 5.83 1.44 3.12 8.31 2.41 5.21 0.34 3.73 3.10 2.02 2.29 1.30 2.88 1.44 1.39 1.67 0.19 1.09 0.51 38 ER8a ExonRegion 0 55.90 15.23 93.39 45.11 4.09 4.49 4.08 51.04 33.01 49.43 61.25 21.65 14.07 66.33 89.09 62.30 120.13 22.83 24.36 26.32 93.90 53.44 24.01 39 E8_Da KnownBoundary 1 109.80 20.39 210.37 97.12 19.78 23.00 23.32 76.36 85.27 101.97 93.34 92.88 46.59 81.82 145.00 83.06 259.84 62.18 65.32 38.22 202.26 51.68 45.24 40 ER8b ExonRegion 0 60.02 4.07 63.39 26.60 4.68 3.75 4.68 29.41 20.17 31.20 22.32 22.86 26.16 61.16 108.66 67.11 44.10 26.19 41.96 10.47 38.15 61.11 54.05 41 E8_Db KnownBoundary 1 88.02 2.70 134.26 77.71 38.96 24.70 19.34 57.38 62.27 49.56 16.69 62.42 33.11 121.61 138.45 82.71 42.64 54.97 30.12 25.69 40.22 59.95 67.52 42 ER8c ExonRegion 0 49.35 8.96 25.98 29.32 12.22 12.78 9.59 43.80 21.08 22.86 28.84 23.40 15.16 53.70 27.92 28.90 34.06 15.36 13.62 6.55 5.91 12.83 11.47 43 E8_Dc KnownBoundary 0 84.16 16.77 126.87 87.57 22.58 10.96 17.27 64.53 41.43 67.56 30.38 12.30 6.33 36.97 41.04 58.10 82.28 31.46 7.53 12.59 79.32 30.56 57.28 44 ER8d ExonRegion 1 27.11 3.15 15.25 22.46 6.83 3.46 4.08 25.46 10.83 16.63 20.39 16.13 7.05 39.60 12.13 12.42 24.59 9.02 1.95 5.71 4.32 6.20 6.12 45 E8_Dd KnownBoundary 0 76.46 5.92 49.38 37.86 4.16 19.99 10.60 31.42 18.87 39.70 34.90 6.30 6.33 43.85 31.28 27.26 32.26 8.25 3.86 19.94 61.04 21.98 16.48 46 ER8e ExonRegion 0 19.18 3.17 3.90 5.91 0.49 3.27 3.62 9.28 1.40 4.90 4.16 2.78 4.02 9.83 3.64 5.31 1.35 7.67 0.00 0.24 2.68 1.08 3.06 47 IG7_AR2 ActiveIntergenicRegion 0 32.66 17.91 16.49 17.76 53.38 16.69 23.87 24.01 15.97 32.78 3.16 4.75 9.54 8.63 1.74 4.46 11.27 4.08 15.26 11.85 0.00 9.30 1.79 48 IG7_SR3 SilentIntergenicRegion 0 104.01 19.86 22.54 23.20 73.63 18.13 28.19 29.19 14.94 33.48 2.82 7.03 5.22 10.03 3.18 10.88 13.65 5.31 25.67 16.88 1.69 5.50 1.77 49 IG7_AR4 ActiveIntergenicRegion 0 29.31 12.72 24.20 25.42 51.49 27.52 24.40 29.01 14.43 25.75 5.45 8.13 15.09 13.19 4.35 23.01 18.16 28.22 42.11 16.67 5.32 13.26 8.67 50 IG7_SR4 SilentIntergenicRegion 0 26.26 5.55 2.78 3.38 24.52 8.59 11.39 7.52 1.39 4.33 1.12 3.99 6.10 5.74 1.19 12.33 9.57 4.55 11.55 18.87 3.19 6.39 8.51 51 IG7_AR6 ActiveIntergenicRegion 0 34.02 9.28 18.29 10.94 29.34 14.23 16.58 11.99 10.81 18.28 5.55 6.44 6.08 9.23 3.72 16.01 13.73 29.63 34.90 13.96 5.46 10.38 5.36