Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSSK4 Gene 0 19.53 17.02 19.60 24.87 26.80 17.61 21.43 31.45 33.27 36.22 19.69 18.70 16.75 28.08 24.11 36.60 22.30 40.92 24.80 45.90 19.64 9.72 28.50 2 339917 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 287913 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 428351 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 424073 Transcript 0 26.27 14.44 23.34 17.03 33.84 23.02 27.03 24.10 33.48 39.40 15.57 12.79 20.00 30.41 25.38 40.47 22.89 44.53 28.32 51.90 17.83 12.32 31.98 6 IG20 Intergenic 0 42.01 14.77 23.91 31.56 45.62 16.11 24.57 46.13 37.87 30.24 26.42 33.96 39.85 35.29 22.17 40.18 27.07 26.31 25.90 48.82 9.51 15.29 28.09 7 IG20_SR1 SilentIntergenicRegion 0 34.48 17.77 21.99 29.73 44.86 16.89 22.19 46.83 28.25 25.02 24.19 25.50 15.70 27.45 18.37 43.51 21.82 23.43 18.80 42.70 7.80 8.85 20.11 8 IG20_AR1 ActiveIntergenicRegion 0 52.34 13.97 25.37 35.04 55.57 15.43 27.09 57.82 51.43 36.80 31.88 52.77 70.86 43.78 25.43 39.03 35.28 20.23 33.57 64.64 9.76 21.95 34.08 9 IG20_SR2 SilentIntergenicRegion 0 41.17 16.53 28.11 33.76 33.37 22.41 32.32 23.07 26.83 27.93 21.69 5.50 6.38 34.50 24.63 49.25 21.42 55.40 30.13 26.32 14.10 10.65 38.03 10 IG20_AR2 ActiveIntergenicRegion 0 12.77 5.47 15.76 15.02 13.06 6.51 5.98 16.84 15.27 16.45 11.90 6.87 9.62 17.50 13.61 19.52 9.45 22.40 1.26 20.10 6.69 9.12 6.73 11 ER1a ExonRegion 0 13.08 12.11 23.51 32.20 29.60 8.54 12.77 37.28 35.69 42.28 29.95 18.02 8.67 36.63 29.58 44.00 21.26 70.02 31.27 42.42 23.18 14.78 34.09 12 E1_Ab KnownBoundary 1 6.30 15.66 30.10 34.19 60.87 17.77 28.71 47.03 36.69 57.27 18.79 24.16 19.48 28.31 101.12 39.90 8.88 33.70 13.27 59.32 8.03 8.27 23.05 13 ER1b ExonRegion 0 22.92 20.42 22.10 31.54 26.26 20.44 23.14 38.26 37.22 36.23 20.56 15.05 17.18 29.08 26.57 37.78 26.25 36.67 21.69 47.15 21.08 13.49 22.59 14 E1_Da NovelBoundary 0 23.86 11.51 35.72 38.72 26.74 15.56 14.13 48.71 48.35 48.27 21.90 37.81 14.28 33.20 38.32 50.67 40.67 36.69 12.99 54.46 19.34 2.88 28.17 15 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I1 Intron 1 17.69 18.15 17.85 24.75 20.47 15.85 12.38 37.22 31.29 39.22 27.11 18.65 11.02 30.74 17.50 42.96 28.53 52.45 33.39 40.09 19.04 8.56 27.46 18 I1_SR1 SilentIntronRegion 1 18.55 16.50 18.56 28.12 22.48 18.17 12.59 46.51 37.11 44.11 28.83 17.29 13.16 32.59 19.23 54.16 33.90 56.95 38.34 49.39 15.43 10.49 30.23 19 I1_AR1 ActiveIntronRegion 1 13.23 26.13 21.84 23.15 38.84 12.61 17.49 36.90 33.07 48.41 32.16 35.48 10.62 32.84 17.37 36.49 26.54 49.89 36.19 41.46 23.75 8.65 26.55 20 I1_AR2 ActiveIntronRegion 1 20.20 15.53 14.15 21.00 6.30 14.97 8.70 23.55 21.76 26.26 21.17 9.92 8.02 27.29 15.67 30.15 22.63 47.82 24.47 25.96 22.62 5.66 23.55 21 E2_Aa NovelBoundary 0 42.97 24.14 26.82 21.41 65.96 11.47 39.35 34.42 40.16 34.97 32.27 18.01 32.30 34.79 47.35 46.14 43.95 50.12 44.05 35.47 23.54 8.88 35.43 22 ER2a ExonRegion 0 15.00 16.84 12.56 14.08 15.88 13.03 15.05 24.38 28.37 25.62 18.76 16.19 8.40 23.92 17.27 40.70 23.47 43.31 28.70 32.28 16.16 7.87 25.06 23 E2_Da NovelBoundary 0 11.71 0.00 20.84 16.05 22.92 14.03 18.46 35.53 43.46 38.84 15.21 23.71 28.73 25.25 38.69 38.54 20.94 47.05 47.81 32.34 13.65 17.88 10.16 24 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E2a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 I2 Intron 0 24.17 12.42 24.25 24.82 43.38 20.96 30.60 29.42 30.31 34.05 23.62 11.30 21.98 27.38 19.76 51.32 31.56 38.30 38.90 47.47 8.78 18.82 39.00 27 I2_AR1 ActiveIntronRegion 0 24.43 12.55 24.49 25.08 43.84 21.19 30.89 29.73 30.63 34.41 23.87 11.42 22.22 27.64 19.97 51.81 31.88 38.71 39.28 47.97 8.87 19.01 39.38 28 E3_Aa NovelBoundary 0 28.89 32.30 25.43 33.00 22.84 7.84 36.43 50.60 60.79 57.00 24.27 12.60 26.95 16.95 4.45 63.57 36.65 37.97 34.35 61.74 16.31 15.19 29.02 29 ER3a ExonRegion 0 26.27 14.44 23.34 17.03 33.84 23.02 27.03 24.10 33.48 39.40 15.57 12.79 20.00 30.41 25.38 40.47 22.89 44.53 28.32 51.90 17.83 12.32 31.98 30 E3_Ab KnownBoundary 0 14.97 32.23 20.02 9.92 15.87 22.71 33.83 17.83 36.31 39.08 17.11 18.76 13.31 14.24 10.14 28.03 28.52 52.81 16.47 59.70 19.65 5.39 23.39 31 E3_Ac KnownBoundary 0 22.67 21.90 21.97 23.14 53.40 38.50 36.61 43.54 38.45 57.16 37.80 28.81 26.13 57.21 61.81 32.64 40.30 38.26 27.39 86.35 41.76 3.12 36.54 32 ER3b ExonRegion 0 15.59 31.18 24.30 20.26 32.20 26.22 30.27 33.01 44.38 63.19 32.73 29.15 14.38 35.95 32.11 27.34 33.45 55.37 21.34 70.21 31.66 3.89 34.65 33 ER3c ExonRegion 0 19.55 13.77 18.96 27.42 24.83 16.78 23.86 35.66 35.76 45.47 21.55 13.13 14.56 26.07 24.36 33.36 21.67 39.43 25.09 55.15 23.69 6.03 34.32 34 E3_Da NovelBoundary 0 18.30 5.85 23.33 16.45 22.67 4.83 23.89 35.65 34.98 39.57 2.68 18.91 0.00 30.55 19.16 34.52 22.63 44.06 4.80 48.77 23.04 2.76 15.54 35 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I3 Intron 0 15.68 14.57 13.97 13.82 24.69 11.58 17.69 18.77 24.81 24.28 14.32 7.73 7.54 24.05 17.30 30.68 18.44 23.10 19.73 40.30 16.05 9.61 30.67 37 I3_AR1 ActiveIntronRegion 0 15.75 14.64 14.04 13.88 24.81 11.63 17.77 18.86 24.93 24.40 14.39 7.77 7.57 24.16 17.38 30.82 18.53 23.21 19.82 40.50 16.13 9.66 30.81 38 E4_Aa NovelBoundary 0 29.41 28.74 21.32 21.44 61.21 28.22 20.62 29.53 36.98 36.37 15.06 21.16 12.66 28.43 24.35 23.58 22.63 33.16 22.40 59.89 17.42 8.63 20.15 39 ER4a ExonRegion 1 20.19 22.29 18.41 26.34 30.86 21.12 22.58 27.88 28.18 23.73 12.53 34.18 28.74 25.37 22.08 30.54 18.44 22.03 17.75 39.12 13.93 8.64 21.68 40 ER4b ExonRegion 0 3.17 2.03 0.00 0.00 1.34 0.00 0.66 0.00 1.24 0.57 1.93 0.00 0.00 0.00 0.00 0.00 1.65 0.00 1.59 0.00 0.00 0.00 0.00 41 IG21 Intergenic 0 27.72 25.28 25.03 29.95 56.58 21.34 33.40 32.18 36.11 42.49 23.67 31.41 39.29 34.28 35.28 43.10 35.40 26.04 39.01 45.38 12.08 10.54 31.13 42 IG21_AR1 ActiveIntergenicRegion 0 30.12 28.34 21.92 29.21 73.79 26.92 44.56 31.71 38.48 45.36 24.07 31.45 35.98 25.31 28.67 38.78 33.28 19.77 42.03 51.41 8.49 10.19 30.48 43 IG21_SR1 SilentIntergenicRegion 0 20.08 17.46 15.93 14.36 10.64 7.74 10.33 15.81 14.91 14.43 13.44 13.94 11.32 18.02 40.19 24.72 5.72 8.52 34.03 17.85 1.50 11.13 16.98 44 IG21_AR3 ActiveIntergenicRegion 0 26.83 23.87 28.48 32.20 48.02 18.46 27.22 34.31 36.55 43.23 24.51 33.22 44.72 42.94 40.21 48.46 40.04 32.69 37.50 43.66 15.92 10.84 33.18