Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NGDN Gene 0 122.21 116.12 155.23 193.60 135.95 89.37 101.39 122.07 78.35 166.53 176.05 107.61 78.11 173.18 214.41 140.86 134.93 91.29 91.86 88.88 59.31 82.57 68.56 2 397158 Transcript 0 0.24 1.13 0.68 0.00 1.19 0.41 0.74 0.00 1.10 0.25 0.43 0.00 0.00 0.00 2.26 1.98 0.37 0.00 0.71 0.24 0.73 0.69 0.33 3 397154 Transcript 0 53.74 33.37 45.72 70.59 45.15 17.63 23.91 25.63 20.71 32.06 25.93 11.91 8.05 14.41 15.50 17.00 11.85 11.53 31.04 12.78 7.06 14.43 12.37 4 408901 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.24 1.13 0.68 0.00 1.19 0.41 0.74 0.00 1.10 0.25 0.43 0.00 0.00 0.00 2.26 1.98 0.37 0.00 0.71 0.24 0.73 0.69 0.33 6 ER2a ExonRegion 1 104.96 73.99 24.07 41.34 90.36 89.01 96.82 29.07 18.40 49.61 93.77 0.78 9.74 92.91 120.07 142.97 91.75 50.22 82.41 37.64 34.81 24.31 62.20 7 E2a_E3a KnownJunction 1 442.82 290.87 63.19 105.95 337.52 324.47 365.49 79.19 47.74 130.39 294.86 5.70 25.32 372.60 414.24 460.14 295.75 131.99 287.91 135.12 116.39 77.77 220.75 8 ER3a ExonRegion 1 395.75 294.94 163.06 183.42 341.11 328.92 328.83 147.75 95.72 247.58 421.37 7.72 51.12 228.13 321.31 446.61 343.24 244.27 321.93 139.68 131.30 111.26 229.84 9 E3a_E4a KnownJunction 0 90.76 60.45 167.56 157.42 90.32 44.12 41.47 124.66 89.06 169.42 65.96 30.31 27.11 18.95 36.34 29.31 23.56 185.46 42.92 41.67 16.99 14.70 41.49 10 ER4a ExonRegion 1 46.56 31.41 80.96 74.60 43.89 19.87 21.66 85.46 63.16 109.34 124.97 53.22 42.47 50.71 73.10 35.01 75.51 69.09 19.82 39.63 45.79 25.41 31.49 11 E4a_E5a KnownJunction 1 58.38 50.39 103.87 77.78 50.34 34.81 22.83 125.15 80.96 166.62 357.14 96.18 54.70 91.71 137.59 33.58 228.61 44.81 17.22 57.08 132.94 24.31 11.44 12 ER5a ExonRegion 0 55.64 51.21 182.83 215.28 77.38 39.35 41.89 166.23 106.32 239.25 313.83 85.27 63.62 266.25 302.70 326.96 241.87 183.81 222.38 138.30 113.67 100.36 148.05 13 E5a_E6a KnownJunction 0 23.19 62.36 102.57 181.06 109.68 73.25 57.72 93.11 81.28 158.73 133.19 85.68 81.81 70.16 77.76 131.50 117.72 135.93 70.59 100.03 62.95 70.79 99.96 14 I5 Intron 0 40.32 27.49 20.57 32.86 26.85 19.53 24.68 24.28 12.06 26.95 25.73 23.00 8.70 15.48 11.95 16.44 11.49 10.16 10.45 14.82 5.87 15.36 5.41 15 I5_AR1 ActiveIntronRegion 0 40.64 27.71 20.73 33.13 27.06 19.69 24.88 24.47 12.16 27.17 25.94 23.19 8.77 15.60 12.05 16.57 11.59 10.24 10.52 14.94 5.92 15.49 5.46 16 E6_Aa NovelBoundary 0 94.31 42.30 28.03 45.95 60.70 28.11 31.97 38.61 30.93 33.07 48.49 43.66 0.00 19.19 15.95 16.41 44.88 10.78 21.18 19.94 5.44 14.21 12.04 17 ER6a ExonRegion 0 69.50 178.88 177.52 205.86 344.10 264.71 284.70 137.00 105.61 239.74 257.19 149.70 123.93 243.83 241.28 174.27 206.83 111.19 88.74 129.99 97.33 109.47 94.32 18 E6_Da NovelBoundary 1 27.71 50.32 18.89 63.30 47.96 18.23 61.21 42.27 27.69 25.17 21.53 66.47 13.47 33.26 28.56 37.43 21.97 16.04 13.46 28.32 5.68 19.29 12.29 19 E6a_E7a KnownJunction 0 85.42 255.28 182.67 213.93 336.16 377.79 448.07 142.40 113.31 248.69 276.18 199.11 123.37 270.88 326.35 205.93 211.03 66.74 113.42 130.84 99.15 95.71 83.14 20 E7_Aa NovelBoundary 0 59.05 41.64 31.02 43.32 47.20 31.91 28.88 50.11 28.53 42.47 36.96 48.92 20.13 14.72 13.60 20.25 22.53 15.79 40.85 14.70 9.08 40.41 18.01 21 ER7a ExonRegion 0 122.56 239.92 174.63 233.82 207.65 203.86 201.89 134.36 112.77 235.03 245.55 234.53 116.99 308.03 333.15 190.83 165.79 104.17 95.26 123.20 92.35 103.70 77.74 22 E7_Da NovelBoundary 0 41.56 21.44 34.09 49.91 53.48 18.00 19.39 35.28 20.11 37.28 46.91 12.30 7.30 14.19 13.35 36.06 16.83 17.00 35.95 17.26 5.75 5.57 12.63 23 E7a_E8a KnownJunction 1 211.37 248.57 196.80 256.18 236.93 185.63 139.51 124.17 105.61 226.15 212.26 237.68 66.23 339.46 341.68 126.38 138.85 134.56 79.34 132.18 77.90 107.53 77.17 24 I7 Intron 0 41.84 25.26 15.63 26.50 33.26 8.97 21.60 25.21 16.50 27.89 24.03 20.80 11.82 10.15 10.93 16.37 13.48 11.81 14.93 9.98 4.50 14.44 8.99 25 I7_AR1 ActiveIntronRegion 0 42.17 25.46 15.76 26.71 33.52 9.04 21.77 25.41 16.63 28.11 24.22 20.97 11.91 10.24 11.01 16.49 13.58 11.91 15.05 10.06 4.53 14.56 9.06 26 E8_Aa NovelBoundary 0 39.49 23.88 37.37 52.14 39.47 11.58 26.19 39.84 23.21 22.40 13.00 7.65 6.82 17.07 24.23 15.72 9.54 14.55 30.49 0.00 11.00 10.10 16.13 27 ER8a ExonRegion 0 276.94 203.55 284.13 347.13 197.53 113.19 129.06 182.10 132.19 303.85 297.46 233.34 174.97 350.57 379.60 239.11 231.70 163.14 120.45 159.93 97.82 131.43 122.51 28 E8a_E9a KnownJunction 1 285.09 249.50 383.96 410.54 249.92 146.05 168.26 266.37 125.84 308.81 221.27 253.13 299.82 369.30 476.54 244.98 182.70 149.61 81.04 171.75 84.20 133.49 136.67 29 ER9a ExonRegion 0 201.76 191.23 306.28 354.09 221.07 150.74 181.97 217.71 117.04 266.71 244.99 221.21 165.95 333.11 393.47 222.50 183.42 168.22 115.92 149.78 91.38 132.74 99.53 30 E9a_E10a KnownJunction 0 216.48 162.87 320.89 382.00 169.35 72.34 130.94 240.98 128.47 257.90 230.69 247.28 153.24 315.85 387.17 169.96 141.19 144.13 103.25 123.42 109.16 121.98 73.67 31 I9 Intron 0 26.03 10.21 13.17 21.97 23.61 7.20 14.15 16.75 8.30 16.18 16.18 13.17 6.93 7.28 9.56 11.29 6.38 5.03 8.41 7.12 2.55 7.11 3.59 32 I9_AR1 ActiveIntronRegion 0 26.10 10.24 13.20 22.03 23.67 7.22 14.19 16.79 8.32 16.22 16.22 13.20 6.95 7.30 9.58 11.32 6.39 5.04 8.43 7.14 2.56 7.13 3.60 33 ER10a ExonRegion 0 147.36 177.06 286.48 358.04 202.40 122.78 130.73 224.19 130.65 266.32 290.03 180.65 131.98 298.19 421.20 183.50 231.53 141.79 115.36 158.48 101.67 143.59 80.75 34 E10_Da NovelBoundary 0 79.27 9.67 95.62 94.73 33.45 33.96 32.95 30.48 27.78 31.03 14.37 25.66 6.82 10.95 23.24 18.63 4.02 30.39 21.93 17.64 12.54 14.39 4.01 35 E10a_E11a KnownJunction 0 95.20 102.94 171.64 245.62 151.27 77.91 99.32 167.91 99.22 181.77 230.06 135.49 103.08 134.21 254.28 91.51 103.04 59.78 82.45 87.69 31.01 78.20 58.30 36 I10 Intron 0 42.13 22.73 28.07 38.31 24.30 10.89 18.96 19.79 8.36 20.30 17.55 10.50 2.70 10.31 19.02 12.46 12.68 11.57 17.80 11.89 10.01 11.64 5.15 37 I10_AR1 ActiveIntronRegion 0 42.71 23.05 28.45 38.81 24.64 11.04 19.23 20.07 8.47 20.57 17.80 10.64 2.74 10.46 19.28 12.63 12.86 11.73 18.05 12.04 10.15 11.79 5.22 38 E11_Aa NovelBoundary 0 89.87 19.34 56.15 70.05 65.20 2.67 31.27 41.44 26.33 33.55 17.16 5.85 0.00 7.18 14.34 15.12 18.79 22.05 56.19 12.02 14.58 5.94 0.00 39 ER11a ExonRegion 0 226.76 199.15 176.41 276.71 193.85 116.13 163.62 195.88 119.47 213.88 232.08 216.85 118.38 233.54 380.36 126.16 214.33 69.13 113.25 112.25 72.72 150.66 61.11 40 E11_Da KnownBoundary 0 98.98 57.36 30.28 55.87 37.18 10.22 41.91 26.53 19.94 16.95 26.74 12.60 6.82 14.54 13.35 8.46 14.12 11.11 33.13 16.55 13.84 8.88 12.21 41 E11a_E11b KnownJunction 1 307.39 253.31 156.68 243.69 199.75 133.56 174.44 201.71 108.56 213.79 173.83 299.05 140.41 291.48 626.00 134.75 274.99 45.68 126.69 148.22 96.62 287.43 76.83 42 ER11b ExonRegion 0 53.74 33.37 45.72 70.59 45.15 17.63 23.91 25.63 20.71 32.06 25.93 11.91 8.05 14.41 15.50 17.00 11.85 11.53 31.04 12.78 7.06 14.43 12.37 43 E11_Ab KnownBoundary 0 40.75 30.46 40.63 62.46 54.67 0.00 9.80 22.59 17.79 27.51 9.42 18.91 28.57 4.94 9.64 4.36 14.03 6.05 4.14 6.26 9.02 11.70 8.11 44 ER11c ExonRegion 0 81.39 84.81 102.85 133.81 75.05 31.92 46.83 105.93 62.45 129.72 86.80 96.90 63.39 81.94 131.94 48.45 66.18 20.28 34.25 55.47 13.01 92.97 25.09 45 IG49_AR1 ActiveIntergenicRegion 0 13.64 16.31 5.81 14.59 3.65 0.53 6.59 3.64 1.97 4.76 0.55 3.71 3.90 0.46 2.36 3.55 0.94 1.52 5.51 4.96 0.38 0.47 3.34 46 IG49_AR8 ActiveIntergenicRegion 0 0.97 1.10 0.88 1.30 0.25 4.81 0.62 0.47 0.89 0.53 0.24 0.00 0.71 0.00 0.19 1.09 0.28 28.87 4.97 15.13 1.08 0.00 1.25 47 IG49_SR8 SilentIntergenicRegion 0 1.77 2.50 1.44 2.44 1.33 5.99 0.41 0.00 1.44 1.38 0.00 0.00 0.09 0.89 2.32 0.49 0.58 47.60 4.59 24.07 2.48 0.69 1.15 48 IG49_AR9 ActiveIntergenicRegion 0 0.85 4.90 1.95 2.17 0.00 8.69 0.21 0.00 0.89 1.41 0.00 0.00 0.53 0.43 0.33 0.00 0.00 56.57 8.83 27.44 0.37 0.00 0.94 49 IG49_SR9 SilentIntergenicRegion 0 2.10 4.60 3.45 0.37 0.00 4.28 1.53 0.00 0.47 2.03 0.00 0.00 0.00 0.18 0.16 0.00 0.00 39.63 2.50 34.91 0.78 0.00 0.63 50 IG49_AR10 ActiveIntergenicRegion 0 0.69 4.98 2.00 1.68 0.29 5.00 2.02 0.00 0.62 2.16 0.07 0.76 0.42 0.37 1.50 0.32 0.36 50.35 7.29 37.25 1.15 0.00 2.24 51 IG49_SR10 SilentIntergenicRegion 0 1.64 9.50 2.07 2.48 0.63 6.35 1.11 1.77 0.87 0.80 0.23 1.17 0.08 0.34 0.44 0.89 0.71 34.64 5.56 32.71 0.71 0.09 1.66