Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TM9SF1 Gene 0 63.91 45.10 75.46 71.22 53.11 54.61 36.59 83.70 72.37 98.57 89.08 62.16 52.46 139.27 160.75 136.22 92.17 101.20 74.04 66.69 186.51 227.35 167.27 2 261789 Transcript 0 67.21 26.93 67.06 65.00 47.01 51.35 26.54 72.50 52.20 75.89 56.97 30.75 34.02 92.36 121.38 103.63 50.65 57.56 41.62 52.48 106.64 132.95 90.93 3 396854 Transcript 0 28.47 21.00 46.17 25.35 15.75 5.57 13.54 24.08 11.71 28.48 25.26 20.77 12.77 37.38 39.42 35.20 31.34 23.90 31.80 13.48 33.36 60.63 40.41 4 IG19 Intergenic 0 18.67 22.65 27.99 33.44 30.19 9.40 13.92 24.78 26.88 31.42 9.30 14.13 10.88 18.05 23.01 23.41 10.12 27.86 23.81 28.33 7.38 5.37 14.22 5 IG19_SR2 SilentIntergenicRegion 0 27.34 27.05 24.11 36.16 31.42 8.07 15.54 24.91 20.33 31.52 5.66 12.05 14.39 9.83 19.02 19.94 6.35 18.42 18.32 28.47 3.76 5.05 15.24 6 IG19_AR2 ActiveIntergenicRegion 0 18.90 28.35 39.66 45.59 43.05 13.42 18.52 33.82 42.74 37.68 14.28 23.63 13.10 29.76 29.99 29.32 15.11 34.24 35.81 33.79 9.94 7.04 15.87 7 IG19_SR1 SilentIntergenicRegion 0 5.20 8.76 19.71 13.79 11.55 6.31 5.33 12.86 16.77 24.61 8.91 4.85 2.61 16.09 21.34 22.22 9.87 36.27 17.46 21.60 10.04 3.85 11.24 8 ER1a ExonRegion 0 6.44 6.13 2.84 0.86 2.06 12.39 2.67 0.89 0.37 4.87 9.58 0.00 0.00 17.54 19.44 16.09 10.70 7.84 5.14 4.92 22.60 20.60 19.84 9 E1_Ab KnownBoundary 0 23.19 8.02 8.16 3.73 11.80 27.14 10.38 8.17 4.02 16.90 9.79 0.00 0.00 32.32 9.89 38.20 30.01 27.28 18.64 17.96 36.45 26.02 46.10 10 ER1b ExonRegion 0 20.46 11.56 9.53 13.44 9.95 25.79 15.16 20.53 16.62 26.30 31.30 4.39 3.86 38.57 63.33 67.83 30.53 56.67 46.87 29.50 71.05 79.74 109.79 11 E1a_E2a KnownJunction 0 0.00 12.17 13.69 26.30 12.90 15.50 1.77 30.85 26.71 34.89 43.48 12.00 6.33 77.93 92.22 29.56 36.00 72.29 49.41 29.27 62.64 122.22 93.39 12 ER2a ExonRegion 0 42.62 38.02 60.07 58.85 42.16 52.82 33.58 76.35 79.14 100.99 117.29 71.33 51.15 175.26 183.86 150.31 121.48 139.66 88.90 82.42 243.91 254.01 201.13 13 E2a_E3a KnownJunction 0 82.53 85.91 103.78 101.85 53.99 42.25 41.65 117.39 117.68 151.96 175.20 119.59 100.81 298.25 270.60 220.88 195.51 173.15 128.85 97.47 375.67 499.24 211.96 14 ER3a ExonRegion 0 91.01 74.70 97.71 95.33 74.28 71.37 48.52 111.25 101.23 146.27 127.88 99.98 75.47 217.83 213.40 230.38 134.03 154.91 107.36 90.88 308.39 389.07 248.16 15 E3_Da NovelBoundary 0 3.78 19.93 18.15 16.28 0.00 5.56 8.48 16.59 11.52 22.19 11.32 12.60 13.15 48.09 25.22 4.36 25.34 26.74 17.88 17.71 26.75 26.21 40.89 16 E3a_E4a KnownJunction 0 72.75 61.17 51.42 76.05 86.67 90.00 49.77 87.45 80.93 88.54 112.08 105.33 38.63 124.14 144.39 129.11 95.09 125.48 57.60 87.76 181.01 161.90 198.04 17 E3a_E5a NovelJunction 0 2.82 0.00 1.33 3.40 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.01 0.00 0.00 11.07 4.80 0.00 8.90 8.57 7.60 18 I3 Intron 0 6.31 12.12 11.52 9.97 13.60 7.07 14.39 13.99 8.08 13.18 8.81 20.98 11.75 31.09 16.75 19.79 16.78 24.37 17.89 23.53 27.80 20.81 31.44 19 I3_AR1 ActiveIntronRegion 0 6.34 12.19 11.60 10.04 13.67 7.12 14.49 14.09 8.13 13.27 8.86 21.12 11.81 31.31 16.87 19.93 16.89 24.54 18.00 23.68 27.99 20.96 31.65 20 E4_Aa NovelBoundary 0 6.67 22.82 20.40 12.92 3.90 11.02 12.50 15.07 11.89 18.35 9.21 11.25 5.84 32.14 13.60 0.00 24.78 37.76 18.73 20.52 39.78 29.02 59.84 21 ER4a ExonRegion 0 76.10 56.19 80.30 85.47 49.90 66.97 44.67 91.67 97.71 109.31 112.75 91.13 78.17 171.89 194.93 152.82 111.27 141.54 79.94 80.68 254.16 226.72 231.47 22 E4_Da NovelBoundary 1 13.93 30.52 25.07 17.35 12.65 9.82 16.91 10.97 22.86 24.01 16.85 23.71 25.49 48.80 54.52 14.70 55.82 70.64 44.24 55.61 45.84 48.01 46.86 23 E4a_E5a KnownJunction 0 116.32 46.31 76.28 97.89 46.69 58.94 49.68 132.01 91.81 135.25 101.82 84.33 41.88 145.33 181.10 104.16 116.41 133.11 110.21 73.06 291.53 261.65 267.95 24 I4 Intron 0 19.05 22.32 21.58 12.57 19.00 13.54 15.55 18.84 13.47 18.88 18.22 33.95 15.49 29.08 31.14 22.79 21.59 15.65 26.44 19.91 22.30 38.41 31.81 25 I4_SR1 SilentIntronRegion 0 11.27 21.20 7.29 2.73 17.59 6.51 7.65 6.83 2.47 1.15 11.45 56.50 57.45 26.96 43.74 20.88 16.01 5.27 16.25 22.34 4.41 60.73 8.15 26 I4_AR2 ActiveIntronRegion 1 20.25 29.77 29.23 20.58 24.15 12.88 18.04 31.39 18.65 28.22 21.29 50.20 19.39 37.60 35.30 30.74 29.48 16.21 31.44 24.40 26.71 50.85 39.38 27 I4_AR3 ActiveIntronRegion 1 25.62 14.14 22.58 6.79 14.47 16.06 13.98 8.62 13.74 15.85 19.42 14.69 1.85 21.97 31.37 19.90 15.30 25.77 30.36 19.18 26.07 28.44 34.04 28 E5_Aa NovelBoundary 0 16.74 16.05 63.75 16.38 6.96 10.28 13.91 48.02 24.68 27.80 14.21 37.36 13.47 67.99 72.07 43.49 17.95 67.57 51.39 56.76 32.19 94.79 57.36 29 ER5a ExonRegion 0 104.29 56.96 116.46 97.00 60.82 83.26 55.21 116.26 94.89 128.49 110.78 78.14 64.36 167.30 229.34 159.39 122.40 120.89 91.34 83.54 251.86 255.00 230.61 30 E5_Da KnownBoundary 0 26.15 23.61 65.17 39.92 8.32 0.00 12.94 33.97 19.15 38.41 21.79 47.42 12.82 48.09 90.98 87.50 29.92 38.10 7.81 9.14 32.19 94.05 84.85 31 E5a_E6a KnownJunction 0 126.10 33.22 106.41 102.65 62.99 79.78 37.63 110.24 74.54 116.07 80.07 37.21 40.09 136.32 176.90 184.57 62.09 93.02 57.23 83.35 171.68 174.27 130.35 32 ER5b ExonRegion 0 28.47 21.00 46.17 25.35 15.75 5.57 13.54 24.08 11.71 28.48 25.26 20.77 12.77 37.38 39.42 35.20 31.34 23.90 31.80 13.48 33.36 60.63 40.41 33 E5_Db NovelBoundary 0 3.78 19.86 23.74 15.08 40.24 2.90 14.66 16.31 14.64 30.22 24.90 12.00 28.08 9.71 6.30 15.81 34.69 21.68 17.22 6.01 20.88 58.97 21.51 34 I5 Intron 0 9.27 14.63 27.42 9.53 8.37 1.15 11.60 11.28 4.61 10.16 8.47 14.74 3.63 13.39 22.00 5.58 16.52 17.24 6.98 10.65 18.60 28.03 22.97 35 I5_AR1 ActiveIntronRegion 0 9.39 14.82 27.76 9.65 8.48 1.16 11.74 11.42 4.66 10.29 8.57 14.92 3.67 13.56 22.27 5.65 16.71 17.46 7.06 10.78 18.83 28.38 23.22 36 E6_Aa NovelBoundary 0 13.04 34.20 4.61 9.79 11.38 8.57 8.44 3.61 4.28 12.97 14.27 0.00 13.47 9.59 21.39 25.21 16.55 13.72 4.80 23.39 11.43 22.84 24.58 37 ER6a ExonRegion 0 69.09 41.43 91.93 91.48 75.97 61.88 39.34 106.36 81.70 106.74 81.25 55.05 61.96 123.23 167.82 110.24 79.15 71.82 62.49 69.18 125.64 204.00 122.60