Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCK2 Gene 0 42.06 8.35 48.69 73.34 36.11 37.73 21.25 31.02 21.04 35.72 166.09 64.36 179.60 221.63 239.78 211.77 186.93 77.37 52.77 39.92 27.79 27.56 31.56 2 216780 Transcript 0 73.78 15.30 60.41 100.98 64.71 53.33 24.96 36.61 20.56 43.91 175.51 64.03 275.08 250.23 282.21 256.19 200.29 90.57 64.29 37.82 24.82 24.86 43.14 3 396973 Transcript 0 17.96 4.12 8.89 20.48 17.50 9.60 13.37 14.16 8.43 13.21 24.37 34.35 47.43 51.96 31.62 49.89 39.53 21.41 18.05 15.56 4.64 6.65 9.52 4 ER1a ExonRegion 0 3.94 1.04 2.12 0.49 7.02 9.64 7.27 0.00 0.58 2.17 6.53 0.94 8.15 27.65 22.89 15.98 10.55 5.44 3.46 2.99 1.97 2.03 5.30 5 E1_Ab KnownBoundary 0 31.93 0.00 9.79 12.49 59.51 118.11 66.95 0.00 6.63 3.89 76.70 12.30 61.36 314.50 251.07 201.31 112.11 29.76 42.17 17.32 23.29 11.57 48.91 6 ER1b ExonRegion 0 26.25 1.35 11.78 14.83 28.18 77.50 34.87 3.70 5.90 10.50 80.70 17.26 38.01 153.74 209.87 179.25 138.42 55.74 49.27 28.18 8.27 11.26 37.91 7 E1a_E2a KnownJunction 0 0.00 0.00 7.33 19.81 10.53 2.67 3.97 9.16 3.85 5.02 35.54 24.01 26.30 26.37 54.64 41.27 33.57 33.04 24.09 15.92 2.35 6.25 7.34 8 Ix Intron 0 3.94 0.34 1.85 3.26 3.39 2.95 3.36 3.70 2.02 5.64 11.44 14.91 10.06 16.88 16.66 25.14 17.03 6.83 5.93 5.40 2.61 0.35 2.48 9 Ix_SR1 SilentIntronRegion 0 4.16 0.54 1.67 2.83 2.14 0.71 2.12 1.36 3.00 6.05 12.61 21.92 6.85 10.25 15.60 26.33 16.26 6.64 5.62 5.40 0.54 0.00 2.83 10 Ix Intron 0 6.84 1.64 3.02 12.56 8.93 3.42 6.70 8.69 5.82 8.05 9.99 55.79 44.38 17.73 20.68 33.95 29.12 13.65 8.40 6.65 1.24 1.10 4.95 11 Ix_SR1 SilentIntronRegion 0 0.00 0.00 0.89 2.23 0.00 0.00 2.65 0.63 0.45 0.42 4.57 20.07 3.84 0.00 6.86 7.30 6.30 3.02 0.00 2.32 0.00 0.00 0.00 12 Ix_AR1 ActiveIntronRegion 0 2.73 0.88 3.57 14.40 5.84 2.84 2.32 5.63 6.75 11.44 16.86 63.03 40.88 19.27 20.80 33.35 26.30 17.29 5.64 6.70 0.95 0.00 2.81 13 Ix_SR2 SilentIntronRegion 0 7.52 2.49 2.74 9.72 7.63 3.46 4.30 8.74 7.15 7.53 10.86 69.52 51.49 19.23 25.43 38.83 32.28 13.71 6.24 9.93 1.72 1.03 5.10 14 Ix_AR2 ActiveIntronRegion 0 5.13 2.31 3.05 10.98 12.59 2.87 6.61 12.14 4.02 8.58 7.31 62.93 48.45 21.06 20.93 38.76 29.90 16.47 8.27 3.75 0.00 1.80 7.97 15 Ix_SR3 SilentIntronRegion 0 8.14 0.78 2.59 7.26 10.61 2.18 6.07 6.51 2.21 5.67 7.66 49.08 34.69 13.37 8.83 22.85 22.38 4.92 10.99 1.97 0.00 1.16 6.82 16 Ix_AR3 ActiveIntronRegion 0 10.34 1.17 3.15 18.38 8.07 5.01 12.36 8.50 7.66 7.12 8.60 35.68 42.05 14.63 21.99 31.16 31.30 12.79 11.44 8.86 2.85 1.20 2.52 17 E2_Aa NovelBoundary 0 6.30 0.00 15.02 22.37 7.05 2.56 4.02 12.20 14.35 11.77 17.16 37.21 48.21 24.19 24.23 24.78 31.42 20.19 0.00 10.61 0.00 0.00 0.00 18 ER2a ExonRegion 0 18.96 2.95 47.33 57.31 25.26 33.90 17.79 31.61 17.45 34.42 199.97 83.02 159.02 228.99 217.41 193.65 231.38 63.40 65.40 35.62 28.97 27.53 30.15 19 E2a_E3a KnownJunction 0 35.56 12.37 72.23 70.82 140.92 212.78 103.34 51.18 29.08 44.21 327.40 158.00 314.27 325.39 237.22 344.87 309.12 136.88 67.48 29.66 45.84 58.23 20.06 20 ER3a ExonRegion 0 28.40 4.01 50.40 64.54 30.08 42.63 25.43 29.50 25.94 42.47 198.60 82.35 204.08 286.26 222.69 229.37 248.10 98.35 51.64 37.70 49.33 32.10 25.51 21 E3a_E4a KnownJunction 0 66.75 9.21 60.76 49.78 15.11 20.33 20.49 30.07 40.83 56.68 240.64 74.42 197.55 308.20 245.63 192.86 224.68 119.59 35.77 28.63 42.32 39.56 24.07 22 Ix_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 1.22 1.61 3.30 1.59 0.00 1.10 2.04 3.46 2.14 4.63 8.81 11.57 5.31 7.92 1.63 13.38 3.83 0.00 1.25 3.52 23 E4_Aa NovelBoundary 0 13.63 0.00 15.40 8.59 8.06 11.13 3.71 4.89 9.11 7.01 10.06 0.00 6.33 25.02 13.35 33.84 21.32 7.09 0.00 2.49 3.03 0.00 7.77 24 ER4a ExonRegion 0 29.02 7.88 45.80 68.18 28.99 30.75 16.72 36.98 33.15 46.38 227.43 88.03 211.74 302.40 292.49 271.41 254.15 127.70 52.00 54.23 37.97 30.36 30.65 25 E4a_E5a KnownJunction 0 16.67 12.96 54.11 76.41 22.92 36.51 28.57 44.20 28.85 42.20 168.15 31.21 193.33 243.34 237.96 155.94 240.39 100.61 49.41 33.94 24.03 34.66 19.21 26 E4a_E6a NovelJunction 0 0.00 0.00 8.13 6.53 0.00 0.00 1.63 9.73 3.07 0.00 0.00 6.30 0.00 8.06 4.45 19.05 8.79 0.00 0.00 0.00 0.00 0.00 3.50 27 ER5a ExonRegion 0 24.31 8.05 46.77 68.44 35.71 35.93 22.79 32.00 25.14 33.50 184.03 59.88 172.23 274.36 270.20 234.28 229.04 73.74 41.16 53.08 31.60 27.97 28.94 28 E5a_E6a KnownJunction 0 32.52 8.68 64.43 92.50 25.47 35.77 24.69 40.50 31.80 36.96 225.69 58.97 218.82 258.99 297.05 303.08 236.28 135.93 39.34 67.37 45.28 35.21 47.38 29 ER6a ExonRegion 0 38.71 11.64 67.96 92.58 36.87 52.02 22.21 41.53 39.13 45.32 228.53 70.36 225.32 331.85 340.50 322.21 280.29 102.76 49.25 67.22 45.89 43.28 47.91 30 E6_Da NovelBoundary 0 6.74 0.00 4.64 7.82 7.98 0.00 1.90 0.00 10.19 6.04 5.21 6.00 6.82 20.37 6.30 27.34 18.23 7.75 22.21 14.00 5.75 2.51 12.29 31 E6a_E7a KnownJunction 0 62.01 12.50 81.07 132.45 75.38 59.23 23.89 53.64 48.99 64.47 243.06 54.92 240.41 360.18 413.87 379.39 206.73 128.17 34.07 66.09 49.24 41.82 68.38 32 E6a_E8a NovelJunction 0 0.00 3.35 1.54 0.00 8.66 0.00 0.00 0.00 0.00 0.00 19.64 6.30 45.78 23.90 36.71 38.28 26.09 11.28 8.47 2.94 2.72 5.39 3.76 33 ER7a ExonRegion 0 65.74 18.34 88.40 142.77 55.76 59.93 33.68 53.68 35.93 61.34 272.49 95.60 325.88 311.19 331.22 350.87 259.73 139.36 85.31 55.93 45.50 47.49 46.17 34 E7_Da KnownBoundary 0 30.15 6.25 13.45 25.20 0.00 7.95 9.89 12.61 5.53 11.66 32.06 49.22 20.45 25.90 51.18 39.22 28.70 35.53 4.52 6.26 11.18 5.82 8.37 35 E7a_E8a KnownJunction 0 65.27 15.33 114.99 157.62 97.11 54.97 25.39 61.36 31.86 55.66 231.37 97.98 426.11 253.40 289.14 361.36 231.32 155.95 72.19 30.87 35.40 28.17 57.11 36 ER7b ExonRegion 0 17.96 4.12 8.89 20.48 17.50 9.60 13.37 14.16 8.43 13.21 24.37 34.35 47.43 51.96 31.62 49.89 39.53 21.41 18.05 15.56 4.64 6.65 9.52 37 E7_Db NovelBoundary 1 17.26 0.00 8.54 52.64 30.73 18.80 12.85 12.32 15.74 11.17 43.01 171.06 164.11 67.16 34.86 101.00 48.81 27.15 33.32 11.70 0.00 16.04 15.96 38 Ix Intron 0 21.71 2.08 5.92 21.47 16.69 11.50 10.87 10.98 7.14 10.30 20.03 32.75 72.08 37.49 28.27 55.00 30.36 20.39 14.03 10.20 4.97 4.63 9.63 39 Ix_AR1 ActiveIntronRegion 0 26.92 1.68 4.04 22.68 11.87 4.74 11.80 13.31 12.70 11.08 24.71 61.67 102.29 37.90 25.89 56.60 44.32 13.46 13.46 11.32 4.73 5.32 9.37 40 Ix_SR1 SilentIntronRegion 0 10.87 2.68 5.18 18.96 13.40 13.26 8.97 9.73 7.28 9.08 19.08 30.51 73.39 39.92 29.86 54.50 29.68 22.52 15.69 11.19 5.70 5.05 9.58 41 Ix_AR2 ActiveIntronRegion 0 38.40 1.55 8.57 28.10 25.46 12.56 14.11 13.72 5.60 13.24 22.06 28.11 62.95 35.83 28.41 61.49 28.90 22.15 13.34 9.18 4.19 3.96 10.06 42 Ix_AR3 ActiveIntronRegion 0 33.31 0.00 4.76 11.01 17.20 5.83 11.86 5.10 1.22 6.38 9.76 13.44 41.60 24.89 20.16 26.79 14.45 8.64 3.85 4.23 2.89 2.65 9.53 43 E8_Aa NovelBoundary 0 33.93 0.00 11.44 48.58 48.73 18.91 12.67 10.51 8.54 8.19 22.43 0.00 58.92 35.79 30.29 21.11 30.48 35.69 12.80 8.56 5.75 0.00 0.00 44 ER8a ExonRegion 0 81.21 12.08 77.52 143.06 61.81 50.15 32.10 47.42 30.10 59.00 207.80 88.31 360.04 323.32 349.64 345.76 258.16 128.03 88.75 43.52 29.77 32.42 59.73 45 E8_Da NovelBoundary 0 14.89 6.58 11.53 10.92 20.37 2.90 1.77 4.27 6.80 10.56 6.95 0.00 19.48 14.36 23.98 20.68 0.00 20.60 0.00 0.00 2.47 0.00 12.12 46 E8a_E9a KnownJunction 0 93.72 16.12 45.30 59.63 62.14 46.79 26.54 42.18 20.51 46.69 154.04 58.67 235.37 232.50 283.33 203.37 190.56 78.06 67.95 39.56 19.21 33.92 44.47 47 E8a_E10a NovelJunction 1 10.00 0.00 14.81 1.96 0.00 0.00 1.85 9.12 3.18 0.00 19.69 6.30 13.64 28.90 49.94 73.91 16.27 10.86 0.00 3.26 5.81 5.45 3.67 48 Ix Intron 0 21.67 2.31 7.96 11.54 11.16 6.26 7.53 5.37 2.44 4.86 10.63 2.70 9.68 12.82 16.99 18.60 10.01 12.37 6.04 7.66 1.67 0.79 5.01 49 Ix_SR1 SilentIntronRegion 0 20.38 3.40 6.69 12.18 6.88 5.92 6.84 4.34 0.90 4.96 11.33 3.85 6.77 12.24 16.57 17.66 11.05 10.28 7.22 6.27 2.29 0.23 4.37 50 Ix_AR1 ActiveIntronRegion 0 23.50 1.21 9.63 11.20 15.62 6.33 8.26 6.66 4.26 4.71 9.87 1.47 12.97 13.91 18.41 20.30 9.53 14.39 5.24 9.42 1.03 1.36 6.02 51 E9_Aa NovelBoundary 0 14.74 2.83 6.50 22.81 44.91 7.89 10.73 9.32 4.80 8.46 19.22 0.00 13.47 31.20 22.13 52.29 29.36 30.55 4.33 9.08 0.00 8.57 15.45 52 ER9a ExonRegion 0 96.21 18.92 62.58 118.33 76.51 60.52 28.12 37.43 24.47 55.11 188.32 73.42 263.08 262.70 300.19 251.67 207.68 112.50 52.99 47.14 31.93 28.71 46.25 53 E9_Da NovelBoundary 0 24.52 2.63 23.18 10.92 8.66 2.90 5.87 17.00 11.92 19.23 12.95 0.00 18.99 9.71 14.83 28.80 43.29 35.90 14.21 27.87 5.87 0.00 10.93 54 E9a_E10a KnownJunction 1 108.54 32.95 56.68 135.01 102.46 109.20 33.92 31.79 17.91 51.04 251.33 60.62 433.25 422.16 409.67 387.51 314.45 82.04 96.38 55.29 27.92 14.51 52.50 55 Ix Intron 0 33.15 4.08 17.60 19.98 15.58 11.78 7.18 8.79 5.17 5.15 11.64 4.35 25.54 17.57 25.46 29.24 20.55 24.71 19.19 11.53 4.87 4.60 5.90 56 Ix_AR1 ActiveIntronRegion 0 35.55 5.17 18.24 22.15 17.59 13.19 8.85 8.07 6.33 6.16 14.15 5.56 28.04 20.88 29.96 34.38 27.16 31.40 22.32 14.52 5.20 5.31 7.49 57 Ix_SR1 SilentIntronRegion 0 39.56 2.71 22.91 22.05 16.60 11.19 4.89 14.27 3.67 3.62 8.52 2.66 32.35 13.20 13.91 17.91 8.38 13.64 14.62 6.22 6.44 2.99 2.48 58 Ix_AR2 ActiveIntronRegion 0 14.49 0.00 8.91 6.86 4.38 5.50 1.20 6.81 0.97 1.74 2.28 0.00 5.40 5.76 16.00 16.39 0.00 2.80 8.69 2.26 1.47 2.90 1.60 59 E10_Aa NovelBoundary 0 71.35 12.89 18.51 26.24 4.33 28.45 6.18 15.16 2.86 4.57 12.11 6.30 54.54 24.60 45.00 36.06 23.66 32.46 24.00 20.13 5.13 0.00 16.82 60 ER10a ExonRegion 0 67.60 10.66 63.67 92.71 45.94 42.05 21.35 36.06 18.51 37.72 189.19 68.27 199.56 229.86 320.63 227.66 189.33 72.01 68.33 45.33 27.57 34.28 36.58