Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PSMB5 Gene 0 164.14 295.53 574.90 313.45 176.74 280.90 199.92 294.44 208.65 419.34 337.98 83.31 50.70 359.10 602.53 271.78 265.83 380.65 426.25 374.57 457.02 423.95 326.01 2 425762 Transcript 0 11.09 30.92 15.77 4.90 31.25 47.50 54.16 2.07 4.48 5.17 12.33 0.00 0.00 7.56 5.05 12.39 6.64 23.08 9.75 24.23 16.84 9.74 6.77 3 361611 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 334454 Transcript 0 4.23 0.00 0.00 0.00 0.00 0.00 0.00 1.73 1.24 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 5 493471 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 460922 Transcript 0 0.00 0.00 7.63 5.43 0.00 0.00 0.00 1.89 1.50 2.90 2.68 0.00 0.00 9.48 0.00 7.18 0.00 6.67 16.00 5.62 0.00 15.80 11.01 7 ER1a ExonRegion 0 5.43 14.88 15.64 3.51 3.59 19.47 11.55 0.00 1.12 1.07 2.39 0.00 0.00 0.00 4.16 0.00 0.00 5.86 6.41 2.88 6.93 1.78 1.85 8 E1_Ab KnownBoundary 0 2.82 8.55 14.84 6.19 0.00 0.00 3.49 0.00 1.13 0.99 2.11 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 0.00 2.97 2.69 0.00 9 ER1b ExonRegion 0 8.72 28.04 16.41 6.19 30.08 37.62 50.47 3.46 5.17 6.81 16.69 0.00 0.00 6.45 12.57 6.93 8.30 27.21 12.55 25.14 12.96 13.64 11.21 10 E1_Da KnownBoundary 0 8.82 18.75 2.84 1.27 3.48 14.93 16.47 1.81 2.78 2.50 7.48 0.00 0.00 4.47 14.46 0.00 0.00 5.80 8.38 2.88 0.00 0.00 8.19 11 E1a_E2a KnownJunction 0 16.74 46.97 15.91 6.29 58.91 75.52 96.76 4.15 7.84 9.27 22.27 0.00 0.00 15.13 5.93 24.78 13.28 40.29 13.08 45.57 26.75 17.70 11.69 12 ER1c ExonRegion 0 27.78 39.37 23.21 11.27 21.61 40.72 31.39 9.72 7.59 14.86 18.95 0.00 0.16 17.31 28.69 20.49 15.37 26.84 38.40 17.32 33.51 19.27 27.97 13 E1_Ac KnownBoundary 0 94.02 97.94 15.91 7.89 47.62 86.03 78.70 11.05 2.92 7.84 35.43 27.76 30.36 195.30 495.83 69.13 22.16 30.97 46.97 31.51 77.59 20.02 58.30 14 E1_Ad KnownBoundary 1 1797.58 2272.16 900.80 495.57 1248.56 2016.91 1635.52 291.71 224.88 513.36 926.39 0.00 19.97 865.80 1607.03 1121.76 796.73 1112.73 1612.09 863.78 1505.51 1395.88 1615.92 15 ER1d ExonRegion 1 928.27 1278.61 587.26 332.15 672.84 1235.06 962.96 198.56 154.39 337.52 617.08 0.36 15.83 692.82 1257.45 740.93 532.82 790.22 998.61 562.50 1079.17 865.53 1025.01 16 ER1e ExonRegion 1 233.00 338.10 664.02 365.75 175.63 341.18 233.28 269.09 194.38 449.42 493.06 64.84 30.64 319.84 499.69 370.94 417.63 546.39 560.34 396.25 719.66 440.58 484.42 17 E1b_E2a KnownJunction 1 36.45 139.05 1090.94 719.56 53.14 121.01 88.15 521.31 327.77 819.83 545.66 168.35 27.92 969.81 1493.17 638.72 466.85 659.52 1031.94 791.17 711.12 1421.60 774.84 18 E1b_E4a KnownJunction 0 0.00 0.00 7.63 5.43 0.00 0.00 0.00 1.89 1.50 2.90 2.68 0.00 0.00 9.48 0.00 7.18 0.00 6.67 16.00 5.62 0.00 15.80 11.01 19 ER2a ExonRegion 0 203.24 497.31 935.62 481.54 235.31 482.08 352.24 448.62 321.73 654.68 462.93 150.95 72.17 574.81 910.39 418.99 361.37 638.76 656.56 597.02 691.66 611.23 506.57 20 E2a_E3a KnownJunction 0 6.45 12.04 44.74 11.99 8.23 22.20 7.60 8.95 6.34 8.78 10.06 6.30 6.82 16.89 29.67 8.12 4.30 29.02 13.18 14.51 11.61 24.49 7.85 21 E2a_E4a KnownJunction 0 805.85 672.18 1015.01 588.97 294.65 466.10 314.31 578.40 377.80 801.99 569.72 184.71 108.27 755.20 1255.46 521.15 490.04 797.98 777.43 710.95 835.29 655.08 594.21 22 I2 Intron 0 12.84 13.70 14.01 11.77 18.02 10.26 12.60 12.00 10.30 12.66 12.18 20.98 14.91 14.28 16.93 15.44 13.27 8.47 12.92 16.11 11.95 12.84 11.22 23 I2_AR2 ActiveIntronRegion 0 21.27 24.40 24.31 23.26 40.43 18.71 23.59 20.51 19.11 23.99 27.05 32.61 31.22 20.73 29.79 28.68 20.73 19.56 31.87 27.93 23.26 25.05 20.33 24 I2_SR2 SilentIntronRegion 0 11.75 9.51 9.61 7.71 13.10 8.98 9.38 9.79 8.74 10.49 8.19 19.11 12.09 13.51 13.65 12.16 11.58 4.84 7.21 14.30 9.01 9.59 8.15 25 E3_Aa NovelBoundary 0 7.56 23.81 32.29 25.24 186.16 113.06 58.56 20.04 18.29 17.30 9.95 5.25 0.00 26.43 9.64 12.90 22.16 27.40 0.00 48.96 14.46 26.33 15.62 26 ER3a ExonRegion 0 7.72 20.55 42.48 31.31 14.86 36.59 12.35 13.54 19.54 15.72 18.24 27.71 10.26 39.32 44.44 24.65 18.02 38.61 37.89 33.42 23.88 36.84 31.82 27 E3a_E4a KnownJunction 0 16.52 17.50 40.06 14.48 10.61 28.90 16.08 15.65 10.88 12.57 19.22 12.60 7.14 32.67 48.71 16.15 4.77 41.41 22.12 20.90 9.64 16.66 33.89 28 ER4a ExonRegion 0 201.89 351.93 858.87 477.50 265.48 323.94 221.76 497.91 343.95 669.79 509.89 125.22 90.76 555.45 973.56 365.35 388.35 491.10 589.16 573.44 622.40 674.21 416.80 29 E4_Da KnownBoundary 1 199.15 227.46 457.23 367.32 150.17 106.87 110.10 258.85 194.76 345.42 132.45 66.62 97.07 108.78 233.51 162.27 70.22 174.81 274.55 137.04 69.99 278.25 103.72 30 ER4b ExonRegion 0 238.23 226.12 201.15 180.08 140.48 122.83 104.92 77.88 71.57 129.29 121.36 57.45 52.04 152.82 308.70 159.69 104.55 110.86 216.42 97.75 60.05 200.66 145.82 31 ER4c ExonRegion 0 12.70 14.24 6.13 0.00 2.68 29.34 7.94 6.91 2.47 9.18 0.00 0.00 0.00 9.74 2.90 2.97 0.00 7.39 0.00 8.51 2.20 2.08 8.81 32 ER4d ExonRegion 0 9.52 5.08 1.23 0.00 2.01 6.42 3.97 5.19 1.54 5.73 0.00 0.00 0.00 2.84 0.73 0.00 0.00 2.77 0.00 4.79 1.10 0.00 1.47 33 ER4e ExonRegion 0 4.23 0.00 0.00 0.00 0.00 0.00 0.00 1.73 1.24 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 34 IG31_SR6 SilentIntergenicRegion 0 4.72 2.72 3.85 3.29 21.07 7.30 6.27 3.58 9.59 1.19 4.76 8.27 0.34 9.86 5.44 1.96 2.06 2.28 2.56 8.21 0.71 0.00 3.72 35 IG31_AR6 ActiveIntergenicRegion 0 8.82 6.10 8.99 7.95 26.31 7.34 6.62 10.37 17.50 2.29 7.09 17.32 4.69 14.08 8.22 5.94 3.30 5.54 3.19 10.64 2.20 0.00 9.79 36 IG31_SR5 SilentIntergenicRegion 0 20.58 7.66 11.15 14.09 23.37 9.87 6.16 13.00 24.44 9.37 3.00 8.29 1.60 11.54 15.40 4.08 0.95 6.33 3.93 6.47 1.83 0.00 8.06 37 IG31_AR5 ActiveIntergenicRegion 0 12.35 10.17 8.99 8.18 22.30 11.92 7.94 6.34 21.41 5.54 0.00 12.99 0.00 12.99 13.06 2.97 6.05 1.85 6.37 10.64 0.00 0.00 2.94 38 IG31_SR4 SilentIntergenicRegion 0 17.10 10.94 9.96 10.91 19.94 7.81 6.64 10.04 18.43 11.46 3.69 5.42 3.98 8.20 8.69 3.61 5.07 5.94 7.12 5.98 7.45 0.37 8.15 39 IG31_AR4 ActiveIntergenicRegion 0 32.28 12.79 11.12 9.80 29.48 11.52 5.44 10.44 21.14 9.54 4.24 7.06 3.94 7.38 7.54 3.65 2.19 5.02 5.19 4.21 6.13 0.14 5.41