Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C14orf93	Gene	0	54.49	39.08	64.79	43.79	42.11	45.45	26.55	33.48	20.26	44.50	40.16	14.81	15.63	37.31	46.88	47.88	46.65	57.59	60.53	43.09	37.35	17.27	26.75
2	299088	Transcript	0	1.06	1.02	0.00	0.00	0.00	0.00	0.29	0.86	0.00	0.51	1.40	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	0.00	0.00	1.04	0.33
3	397382	Transcript	0	0.00	6.71	1.80	2.03	4.33	20.10	6.76	2.42	0.00	0.00	18.27	0.00	0.00	11.65	0.00	12.73	9.54	6.51	46.40	3.26	31.51	0.00	12.55
4	406429	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	397379	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	397380	Transcript	0	4.47	6.97	3.16	1.95	4.12	1.94	3.87	2.22	0.53	1.17	2.04	1.79	1.11	2.80	7.02	4.64	4.44	3.43	7.80	4.88	1.48	1.02	3.38
7	397377	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	341470	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	397376	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	IG31_SR6	SilentIntergenicRegion	0	4.72	2.72	3.85	3.29	21.07	7.30	6.27	3.58	9.59	1.19	4.76	8.27	0.34	9.86	5.44	1.96	2.06	2.28	2.56	8.21	0.71	0.00	3.72
11	IG31_AR6	ActiveIntergenicRegion	0	8.82	6.10	8.99	7.95	26.31	7.34	6.62	10.37	17.50	2.29	7.09	17.32	4.69	14.08	8.22	5.94	3.30	5.54	3.19	10.64	2.20	0.00	9.79
12	IG31_SR5	SilentIntergenicRegion	0	20.58	7.66	11.15	14.09	23.37	9.87	6.16	13.00	24.44	9.37	3.00	8.29	1.60	11.54	15.40	4.08	0.95	6.33	3.93	6.47	1.83	0.00	8.06
13	IG31_AR5	ActiveIntergenicRegion	0	12.35	10.17	8.99	8.18	22.30	11.92	7.94	6.34	21.41	5.54	0.00	12.99	0.00	12.99	13.06	2.97	6.05	1.85	6.37	10.64	0.00	0.00	2.94
14	IG31_SR4	SilentIntergenicRegion	0	17.10	10.94	9.96	10.91	19.94	7.81	6.64	10.04	18.43	11.46	3.69	5.42	3.98	8.20	8.69	3.61	5.07	5.94	7.12	5.98	7.45	0.37	8.15
15	IG31_AR4	ActiveIntergenicRegion	0	32.28	12.79	11.12	9.80	29.48	11.52	5.44	10.44	21.14	9.54	4.24	7.06	3.94	7.38	7.54	3.65	2.19	5.02	5.19	4.21	6.13	0.14	5.41
16	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.59	0.00	0.00	1.02	0.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.65
17	ER1b	ExonRegion	0	8.16	11.91	17.51	2.73	14.53	22.53	22.70	1.23	3.53	2.46	9.11	0.00	0.00	10.90	5.80	9.34	5.66	11.61	20.48	5.47	17.94	2.68	8.39
18	E1_Da	NovelBoundary	0	84.98	72.29	21.38	7.82	55.18	14.48	71.19	21.56	5.53	15.71	23.85	6.60	0.00	50.44	29.30	62.55	78.35	8.91	93.84	47.94	11.74	15.25	42.68
19	E1a_E2a	KnownJunction	0	0.00	10.06	3.49	0.00	21.39	14.08	9.01	8.95	1.53	1.64	13.11	0.00	0.00	42.26	27.57	17.17	9.26	6.09	23.62	9.72	6.12	3.12	21.34
20	E1a_E4a	KnownJunction	0	97.80	132.74	80.54	34.69	158.83	253.60	153.73	21.07	28.41	36.88	47.17	12.15	5.84	93.24	45.24	84.00	96.40	117.60	153.60	57.59	78.09	27.92	80.92
21	E1a_E4b	KnownJunction	0	0.00	6.71	1.80	2.03	4.33	20.10	6.76	2.42	0.00	0.00	18.27	0.00	0.00	11.65	0.00	12.73	9.54	6.51	46.40	3.26	31.51	0.00	12.55
22	ER1c	ExonRegion	0	24.69	43.04	50.85	11.58	42.37	65.71	48.77	5.47	10.91	5.54	20.62	0.00	0.00	30.59	18.86	23.78	24.21	34.80	53.09	14.54	52.15	7.64	27.41
23	ER1d	ExonRegion	1	48.58	83.38	55.90	24.92	89.45	158.14	90.22	18.44	20.94	27.58	42.62	2.06	0.00	95.20	34.68	57.04	61.46	93.36	107.85	35.06	76.82	20.34	66.84
24	I1	Intron	0	6.54	18.04	6.47	9.44	9.63	4.21	8.22	7.08	3.81	8.96	5.97	23.01	10.15	9.93	7.36	12.21	9.07	3.18	4.70	16.70	0.62	2.24	2.83
25	I1_AR1	ActiveIntronRegion	0	6.64	17.39	6.13	9.40	9.55	4.19	7.69	7.24	3.53	8.89	5.85	22.86	9.94	10.19	6.70	12.45	9.23	3.22	4.85	16.96	0.61	2.19	2.80
26	I1_SR1	SilentIntronRegion	0	5.40	25.97	10.60	10.00	10.66	4.48	14.62	5.30	7.08	9.95	7.50	25.11	12.83	6.98	15.23	9.53	7.36	2.76	2.96	13.84	0.80	2.96	3.21
27	I1_SR2	SilentIntronRegion	0	17.78	11.87	9.78	4.13	23.15	12.16	12.10	8.54	3.74	3.85	1.48	7.47	11.05	9.16	17.89	19.71	8.32	11.86	9.75	14.61	1.12	0.00	5.99
28	I1_AR4	ActiveIntronRegion	1	3.44	0.00	0.00	0.00	1.34	0.00	0.00	0.00	0.00	0.00	0.00	3.25	21.69	0.00	2.72	3.53	7.63	0.00	0.00	4.79	0.00	1.17	1.28
29	I1_SR4	SilentIntronRegion	0	8.23	8.73	10.06	5.50	15.59	9.30	7.48	6.07	3.74	12.08	4.88	8.45	7.48	6.51	7.92	12.89	10.33	8.50	7.91	8.84	1.82	3.23	3.60
30	E2_Aa	NovelBoundary	0	35.56	12.89	19.60	14.55	33.02	18.51	22.96	18.15	2.31	14.91	20.90	0.00	5.84	3.00	0.00	0.00	8.79	7.42	9.51	12.27	0.00	0.00	8.19
31	ER2a	ExonRegion	0	10.45	11.79	7.06	2.52	5.59	9.49	6.00	4.11	1.41	6.97	15.81	14.69	3.80	20.23	25.63	8.77	20.64	6.71	10.12	9.05	4.55	5.72	8.40
32	E2_Da	NovelBoundary	0	16.45	15.85	21.17	9.02	16.04	0.00	5.74	11.05	11.37	15.77	13.64	19.66	6.82	7.42	4.45	16.41	4.21	5.06	0.00	20.96	3.03	3.12	0.00
33	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E2a_E4b	KnownJunction	0	10.52	6.71	4.73	1.27	0.00	0.00	2.16	0.00	1.79	3.68	8.63	0.00	6.82	7.42	6.30	12.73	8.42	6.22	3.58	0.00	2.97	2.63	0.00
35	I2_SR2	SilentIntronRegion	0	11.88	13.32	2.56	0.00	18.78	5.97	17.31	10.85	3.44	7.20	0.00	11.68	3.61	6.06	12.46	11.13	1.54	3.87	4.47	19.91	1.03	0.97	4.12
36	I2_AR2	ActiveIntronRegion	0	4.23	0.00	0.00	0.00	13.38	11.00	17.21	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	4.26	0.00	0.00	5.87
37	E3_Aa	NovelBoundary	0	18.45	31.64	12.48	16.81	25.13	2.78	16.61	4.15	1.16	10.23	6.95	5.85	8.28	14.89	6.30	19.40	12.34	13.39	0.00	23.91	2.41	0.00	4.10
38	ER3a	ExonRegion	0	13.40	17.56	9.47	5.86	12.37	5.81	9.36	6.66	1.59	3.51	6.13	5.36	3.34	8.40	10.54	10.07	13.32	8.68	13.98	12.22	4.44	3.07	10.15
39	E3_Da	NovelBoundary	0	11.93	4.87	11.77	9.32	25.98	25.33	0.00	15.03	7.93	10.21	5.37	12.60	0.00	4.65	8.90	7.35	12.90	15.71	0.00	16.11	5.93	0.00	3.50
40	E3a_E4b	KnownJunction	0	0.00	3.35	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.51	0.00	0.00	1.62	9.41	2.43	0.00	0.00	0.00
41	I3	Intron	0	14.47	7.48	7.44	3.74	13.72	5.78	8.35	8.80	5.08	4.72	5.34	7.13	3.05	3.60	7.85	5.47	8.68	5.07	6.28	10.63	2.60	1.64	2.70
42	I3_AR1	ActiveIntronRegion	0	15.40	9.04	9.01	6.31	14.38	10.89	12.01	10.82	5.82	3.13	6.95	6.05	3.09	5.61	5.78	11.16	12.00	7.76	6.35	11.92	5.04	1.93	5.10
43	I3_AR2	ActiveIntronRegion	0	27.99	11.07	13.96	14.08	23.34	15.49	16.70	19.11	12.83	14.72	9.88	7.70	13.81	7.31	6.93	5.28	4.22	14.78	18.94	27.07	4.41	2.89	10.60
44	I3_SR1	SilentIntronRegion	0	13.21	6.65	6.37	1.65	12.92	2.38	6.01	7.22	4.25	4.95	4.32	7.88	2.26	2.31	9.06	2.53	7.52	3.03	5.45	8.96	1.18	1.45	0.88
45	E4_Aa	NovelBoundary	0	31.64	12.10	17.68	11.72	24.62	15.96	18.28	8.26	10.19	15.71	4.74	18.91	0.00	0.00	0.00	13.84	17.67	12.89	9.04	21.09	5.19	8.08	7.43
46	ER4a	ExonRegion	0	25.66	26.69	52.42	26.74	29.35	36.76	19.78	19.35	21.16	38.87	30.32	24.05	6.53	33.51	24.22	38.75	39.21	76.24	67.60	37.80	35.22	14.85	30.31
47	E4_Ab	KnownBoundary	0	13.48	13.68	40.60	19.44	23.26	13.63	12.32	14.54	16.38	37.02	31.27	17.41	21.59	14.83	5.81	23.93	21.69	54.22	26.92	33.24	22.30	8.27	26.80
48	ER4b	ExonRegion	0	28.05	42.53	59.43	36.76	62.85	92.70	57.81	44.18	25.39	56.06	61.02	18.08	18.12	45.11	52.56	58.66	57.12	91.14	102.49	49.94	43.94	25.43	38.55
49	E4_Da	KnownBoundary	0	33.56	74.59	71.94	56.67	35.48	125.72	72.96	29.16	20.75	55.52	53.22	25.81	25.97	45.79	49.94	63.32	52.73	81.87	68.80	58.10	51.52	28.53	32.86
50	E4a_E4c	KnownJunction	0	0.00	9.27	6.92	7.62	8.23	2.90	6.54	7.06	5.09	11.52	0.00	0.00	5.84	10.01	13.47	11.19	0.00	4.68	0.00	3.26	2.47	0.00	0.00
51	ER4c	ExonRegion	0	33.24	38.74	60.59	45.10	27.76	31.41	20.32	33.11	19.50	44.61	39.02	13.43	18.18	33.87	46.21	55.01	60.21	63.81	60.93	49.17	47.57	19.52	36.58
52	E4_Ac	KnownBoundary	0	44.45	39.20	81.46	47.65	36.33	55.76	29.46	35.69	17.97	45.67	32.69	13.65	0.00	24.90	31.15	50.84	62.65	75.03	54.12	58.74	48.31	19.96	36.11
53	ER4d	ExonRegion	0	28.66	25.46	71.50	45.06	31.07	42.44	25.48	35.01	20.64	52.03	36.71	7.78	24.17	43.20	48.36	44.68	36.01	80.82	49.08	42.06	45.07	18.39	25.28
54	E4b_E5a	KnownJunction	0	20.60	14.80	67.18	45.28	22.67	47.81	24.64	35.57	18.43	39.81	32.90	11.70	12.99	34.67	46.11	46.91	35.90	33.58	66.17	40.40	47.57	8.45	12.04
55	I4_AR1	ActiveIntronRegion	0	7.47	3.13	3.20	1.16	7.07	5.27	2.13	6.37	1.06	2.64	2.26	0.15	0.73	1.24	2.44	1.70	4.40	0.00	1.97	4.64	8.83	1.19	3.34
56	ER5a	ExonRegion	0	51.90	38.04	85.81	50.17	45.69	55.24	24.54	40.85	24.30	56.46	49.57	14.16	16.44	47.20	53.67	59.43	41.90	66.14	77.94	59.42	45.82	18.88	26.52
57	E5a_E6a	KnownJunction	0	78.31	41.83	84.59	64.96	59.34	108.63	61.12	53.60	31.63	82.12	79.28	20.26	33.11	40.32	106.31	74.85	76.58	81.83	93.09	61.36	49.48	24.80	16.30
58	E6_Aa	NovelBoundary	0	7.56	18.88	0.00	3.66	7.47	2.78	22.88	0.00	0.00	4.08	0.00	0.00	0.00	0.00	4.45	7.86	0.00	4.81	3.95	6.39	0.00	2.88	3.50
59	ER6a	ExonRegion	0	89.47	59.14	81.31	56.25	63.44	95.89	45.10	48.42	34.42	56.29	72.08	17.53	35.93	54.30	65.09	57.76	65.11	67.68	98.90	65.96	40.66	25.10	30.65
60	E6a_E7a	KnownJunction	0	173.88	95.97	97.96	77.31	101.78	92.28	56.57	49.54	36.20	40.10	88.97	30.76	57.14	92.00	75.65	36.23	88.36	61.19	61.84	58.23	31.01	25.53	29.79
61	E7_Aa	NovelBoundary	0	6.59	3.22	2.72	4.13	18.85	0.00	4.37	4.23	1.39	1.67	0.00	0.00	0.00	2.35	4.45	0.00	0.00	1.95	0.00	6.14	2.47	0.00	15.88
62	ER7a	ExonRegion	0	174.63	72.68	103.03	79.40	52.64	85.10	44.23	69.07	37.33	66.53	82.22	30.76	26.61	63.59	76.13	85.85	79.32	84.32	88.91	62.85	60.37	36.86	42.98
63	E7_Da	NovelBoundary	0	3.41	5.92	5.20	13.09	16.38	0.00	14.00	4.19	0.00	1.29	4.53	0.00	22.56	4.83	8.90	0.00	8.23	2.57	3.86	0.00	0.00	0.00	10.07
64	E7a_E8a	KnownJunction	0	212.48	70.84	112.24	75.15	50.76	31.91	36.26	58.41	41.09	69.92	59.01	21.01	19.32	46.21	97.41	61.69	64.33	71.51	49.32	70.37	45.41	34.54	34.49
65	I7_SR2	SilentIntronRegion	0	14.51	1.74	0.00	0.00	5.73	0.79	3.97	2.21	0.00	1.46	1.66	1.53	1.66	3.56	4.24	5.10	2.83	4.33	5.43	0.91	0.94	0.00	0.00
66	ER8a	ExonRegion	0	167.41	84.76	127.76	76.78	58.20	50.44	35.47	55.83	37.65	72.54	56.00	33.60	27.77	55.75	84.73	84.27	87.87	62.91	96.86	66.77	57.74	35.38	32.30
67	E8a_E9a	KnownJunction	0	57.42	104.85	134.53	79.51	48.22	108.18	84.26	68.18	34.72	78.65	40.48	24.46	35.22	34.08	57.85	41.19	69.85	59.15	44.61	77.92	50.97	32.45	16.22
68	ER9a	ExonRegion	0	58.03	60.42	121.62	69.83	116.15	107.17	58.60	39.03	28.39	63.65	61.89	27.48	28.06	50.29	86.81	65.52	71.50	83.05	70.02	62.50	48.16	21.11	24.39
69	E9_Da	KnownBoundary	0	116.47	71.76	142.96	116.70	41.68	100.68	34.09	59.64	24.74	60.52	72.76	24.31	27.11	65.51	125.22	152.78	115.10	153.46	216.10	83.86	72.53	20.70	64.02
70	E9a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	ER9b	ExonRegion	0	53.81	39.66	103.38	90.45	38.43	39.15	25.87	46.73	29.27	64.33	70.42	16.17	10.62	65.53	98.14	86.34	97.04	80.61	111.17	70.46	58.35	24.80	39.95
72	E9_Ab	KnownBoundary	0	131.58	49.66	78.68	52.31	83.96	29.59	35.51	33.35	19.42	54.61	73.76	26.11	14.93	48.27	67.12	77.42	66.39	42.90	85.08	62.38	70.36	11.51	15.45
73	ER9c	ExonRegion	0	176.18	74.98	67.79	63.43	72.81	55.58	37.32	41.17	19.83	55.79	52.16	10.28	14.10	40.36	67.39	63.58	63.99	53.00	77.30	47.27	41.82	16.43	36.88
74	E9_Db	KnownBoundary	0	56.53	61.57	43.67	41.19	47.37	49.86	25.75	27.85	10.21	44.00	36.80	12.00	20.13	36.79	51.92	36.23	35.16	13.60	37.55	30.62	10.75	2.94	18.69
75	ER9d	ExonRegion	0	11.53	31.96	31.62	30.35	56.43	40.93	13.67	24.54	12.73	34.80	18.60	11.06	13.23	13.54	14.97	13.96	7.84	4.95	13.65	13.79	2.99	3.76	5.51
76	E9_Dc	KnownBoundary	0	3.78	16.05	20.22	14.68	39.22	10.22	16.16	19.76	3.12	15.71	8.84	12.60	6.82	0.00	4.45	12.99	4.77	0.00	4.42	5.82	2.97	3.12	4.35
77	E9_Dd	KnownBoundary	0	10.96	13.02	18.07	18.01	42.28	8.69	15.99	9.82	8.68	14.85	10.42	0.00	0.00	2.77	5.69	12.56	9.16	7.63	14.02	0.00	0.00	8.82	17.07
78	ER9e	ExonRegion	0	5.44	19.75	32.56	30.57	50.46	22.27	14.09	27.04	12.97	32.60	13.94	10.21	4.69	2.78	6.63	19.74	13.91	7.00	17.06	5.17	4.41	6.99	17.41
79	E9_De	KnownBoundary	0	0.00	0.00	1.83	6.13	3.90	13.46	2.03	2.42	0.00	3.25	0.00	0.00	0.00	0.00	0.00	4.19	4.39	0.00	0.00	3.20	2.84	2.51	4.01
80	E9_Df	KnownBoundary	0	14.89	8.29	10.79	7.76	11.21	5.34	2.25	14.29	1.19	3.14	0.00	0.00	0.00	2.35	4.94	0.00	4.02	0.00	3.67	5.05	2.90	0.00	4.27
81	ER9f	ExonRegion	0	17.70	24.22	33.14	28.81	41.23	21.34	9.75	24.36	11.51	25.39	8.00	8.66	4.90	4.58	12.92	16.35	20.26	7.39	17.23	10.73	5.01	7.86	19.36
82	ER9g	ExonRegion	0	16.93	20.34	35.54	28.62	32.11	20.17	7.94	25.93	12.35	24.08	5.80	8.66	9.38	8.12	20.31	14.86	19.81	7.39	19.11	12.77	4.41	6.25	17.62
83	ER9h	ExonRegion	0	14.29	16.43	23.27	17.54	27.63	12.09	11.26	23.57	8.45	16.45	9.15	6.65	7.87	6.78	10.59	9.20	9.52	7.08	8.28	13.29	6.17	4.72	4.32
84	ER9i	ExonRegion	0	2.12	3.05	0.61	0.00	0.00	0.00	0.00	1.73	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	3.30	0.00	0.00	0.00	0.00	2.08	0.00
85	ER9j	ExonRegion	0	2.12	2.03	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	3.30	0.00	0.00	0.00	0.00	2.08	0.00