Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP4S1 Gene 0 16.74 16.36 10.57 31.58 19.67 15.57 17.83 22.86 27.67 16.95 9.70 15.51 22.17 20.79 22.20 24.26 23.31 16.69 15.86 19.21 11.40 13.27 12.41 2 334725 Transcript 0 7.71 3.01 0.00 0.09 6.54 1.67 2.00 0.00 0.06 0.00 0.59 2.40 3.71 2.68 10.02 9.89 4.95 0.00 8.70 6.43 6.66 7.54 7.04 3 313566 Transcript 0 40.31 42.20 37.41 78.15 44.28 38.13 37.19 53.17 59.96 36.65 13.23 41.45 55.88 34.36 41.47 34.01 43.01 13.01 19.83 27.54 9.31 35.87 10.93 4 216366 Transcript 0 5.06 3.97 2.77 7.64 5.27 2.34 5.08 5.54 9.55 6.31 6.08 9.39 6.83 6.05 6.74 7.92 6.36 6.88 4.93 5.67 3.34 2.68 3.43 5 ER1a ExonRegion 0 10.06 6.15 2.72 4.24 1.80 6.78 9.38 6.18 7.64 6.44 4.69 2.75 8.20 4.54 9.58 22.18 20.43 13.16 13.52 12.96 13.00 3.10 5.55 6 E1_Ab KnownBoundary 1 7.33 0.00 9.14 6.93 0.00 0.00 6.58 23.62 10.97 4.11 7.00 6.30 0.00 5.30 36.96 23.84 35.72 22.09 15.53 21.22 13.65 0.00 7.17 7 ER1b ExonRegion 0 38.14 44.75 16.75 46.05 41.34 51.59 41.70 37.05 59.79 38.20 27.32 7.45 14.48 42.55 49.19 79.57 67.43 39.89 46.33 40.71 46.03 28.80 43.51 8 E1_Da NovelBoundary 0 0.00 0.00 1.60 1.50 0.00 0.00 8.66 2.05 4.69 2.71 0.00 0.00 6.82 0.00 9.27 19.31 26.27 7.34 4.05 11.70 8.71 0.00 18.69 9 E1a_E2a KnownJunction 0 3.70 38.61 7.36 42.22 7.30 19.76 14.49 45.76 34.26 27.86 16.37 0.00 0.00 14.30 17.80 7.43 36.09 24.79 7.72 17.26 30.33 6.18 0.00 10 ER2a ExonRegion 0 29.96 33.70 25.63 96.50 60.45 54.08 47.74 65.38 73.94 50.52 38.88 23.64 55.00 62.00 56.23 73.79 61.01 48.52 39.37 48.06 28.18 38.24 38.78 11 E2a_E3a KnownJunction 0 34.75 71.96 30.10 99.79 62.14 106.13 118.62 98.04 81.36 52.49 33.75 51.92 80.19 29.49 46.36 41.61 53.02 21.06 16.94 66.35 5.25 56.82 15.11 12 ER3a ExonRegion 0 39.39 72.69 34.69 109.14 44.81 62.69 52.88 81.65 90.66 48.62 27.84 60.31 70.03 46.18 46.19 27.84 43.82 7.33 28.19 49.55 12.01 43.90 17.15 13 E3a_E4a KnownJunction 1 76.83 87.62 38.82 124.43 79.71 54.63 36.83 84.28 94.13 46.39 21.85 99.48 76.94 47.44 50.31 37.08 57.78 4.56 12.24 60.72 14.95 41.39 26.12 14 ER4a ExonRegion 0 46.90 41.23 30.97 130.84 55.30 36.49 32.91 95.22 92.76 49.82 18.21 48.63 65.73 61.48 49.41 43.25 42.58 9.02 16.11 54.86 10.95 41.61 13.92 15 E4_Da NovelBoundary 0 3.48 8.16 1.45 40.89 3.40 0.00 3.97 4.15 9.49 1.67 0.00 6.00 0.00 0.00 0.00 3.33 0.00 0.00 8.09 0.00 0.00 5.08 0.00 16 E4a_E5a KnownJunction 0 25.19 7.89 20.76 84.24 45.25 27.60 16.74 66.58 61.37 30.94 7.05 36.46 24.19 69.28 32.76 41.19 16.08 1.91 12.61 32.15 8.83 34.35 17.41 17 E5_Aa NovelBoundary 0 2.89 0.00 6.36 15.08 4.33 0.00 16.47 5.79 5.27 2.74 4.63 6.45 0.00 0.00 0.00 0.00 4.49 4.97 4.14 8.95 5.68 0.00 8.71 18 ER5a ExonRegion 1 49.56 28.64 41.87 130.50 70.91 43.71 41.26 95.35 105.81 50.08 15.14 55.20 113.73 78.77 61.17 68.61 42.64 8.31 26.01 45.04 15.61 66.67 27.90 19 ER5b ExonRegion 0 4.30 3.49 0.53 7.11 9.63 1.56 4.28 5.59 9.18 4.28 5.44 13.78 14.77 15.75 11.46 13.67 18.04 0.71 9.08 9.79 2.42 3.30 14.88 20 E5_Db NovelBoundary 0 13.63 5.72 10.08 26.44 23.85 13.46 14.04 23.66 10.68 7.92 10.53 26.56 33.11 21.54 24.48 11.96 30.01 13.47 3.67 20.77 2.90 5.27 7.68 21 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 3.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E5b_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.63 3.89 8.00 7.65 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 I5 Intron 0 6.53 6.79 3.88 15.11 8.63 4.98 8.51 6.42 11.04 6.19 2.52 9.26 23.81 6.62 6.99 8.16 7.19 4.81 3.52 6.38 1.31 2.00 2.33 24 I5_SR1 SilentIntronRegion 0 6.53 6.80 3.88 15.12 8.64 4.99 8.51 6.42 11.05 6.20 2.52 9.27 23.83 6.62 6.99 8.16 7.20 4.82 3.52 6.39 1.31 2.01 2.33 25 E6_Aa NovelBoundary 0 1818.69 852.48 636.46 846.28 834.04 629.01 1216.02 941.29 653.52 602.62 279.28 232.28 364.59 149.74 199.15 721.78 519.49 607.83 498.93 758.63 388.21 321.11 587.90 26 ER6a ExonRegion 0 15.42 6.03 0.00 0.18 9.78 3.34 4.00 0.00 0.12 0.00 1.17 4.79 7.43 5.36 20.03 19.78 9.90 0.00 17.41 12.87 13.33 15.08 14.09 27 E6_Da NovelBoundary 0 1333.27 1342.20 1115.28 1238.00 997.11 649.17 1745.53 1484.62 1238.44 1364.88 502.23 356.22 312.15 319.68 403.73 1307.69 1011.78 1770.56 776.30 1523.02 717.61 531.14 1023.42 28 I6 Intron 0 13.69 12.09 4.28 21.39 8.51 4.21 8.70 13.16 15.84 8.56 2.12 4.93 11.16 6.55 8.87 14.72 14.29 13.42 9.97 12.09 5.74 2.72 5.21 29 I6_SR1 SilentIntronRegion 0 13.61 11.81 3.05 20.06 10.16 4.12 8.41 14.34 14.45 8.61 1.59 4.12 9.82 5.04 9.86 14.10 15.68 13.97 10.35 12.71 5.47 1.48 4.86 30 I6_AR2 ActiveIntronRegion 0 13.86 12.62 6.49 23.83 5.59 4.38 9.24 11.10 18.35 8.49 3.06 6.38 13.59 9.27 7.14 15.88 11.85 12.47 9.31 11.03 6.24 4.93 5.84 31 E7_Aa NovelBoundary 0 36.97 35.72 11.97 32.76 0.00 9.65 22.39 19.80 17.33 12.09 6.42 12.60 6.17 12.77 5.19 15.12 8.88 17.58 27.48 14.57 5.62 9.00 4.35 32 ER7a ExonRegion 0 10.13 7.95 5.54 15.27 10.55 4.67 10.16 11.08 14.48 8.72 4.15 11.12 13.67 12.11 13.48 12.42 12.72 13.77 9.85 11.34 6.68 5.37 6.85 33 E7_Da NovelBoundary 0 0.00 3.35 3.52 5.66 0.00 0.00 10.64 7.15 13.31 2.87 0.00 17.56 6.82 0.00 0.00 8.37 9.07 0.00 0.00 3.26 0.00 0.00 3.24 34 I7 Intron 0 7.91 9.02 3.75 16.70 9.37 3.15 7.50 9.50 12.50 6.37 2.09 7.03 11.94 4.35 4.84 7.52 6.74 5.82 5.16 8.11 1.62 2.65 3.69 35 I7_AR1 ActiveIntronRegion 0 4.41 7.46 1.89 13.28 8.35 1.91 5.51 1.79 3.12 2.95 2.01 1.24 8.04 3.79 4.80 13.26 5.73 4.42 11.05 7.32 1.53 0.00 3.06 36 I7_AR3 ActiveIntronRegion 0 5.60 9.24 3.32 22.50 7.23 3.94 7.56 9.81 14.23 6.01 5.61 4.46 10.86 4.05 5.18 5.79 5.00 6.21 6.57 10.81 3.08 4.00 9.33 37 I7_AR4 ActiveIntronRegion 0 7.82 5.99 5.66 12.64 8.92 5.77 8.68 12.32 15.16 8.99 1.91 8.22 7.85 3.98 3.41 8.24 7.94 3.64 4.95 7.72 1.22 3.33 1.60 38 I7_SR2 SilentIntronRegion 0 7.96 9.28 2.58 18.87 10.28 3.41 8.43 10.51 15.67 9.71 2.04 9.68 15.83 3.79 6.94 5.60 6.29 4.45 4.81 10.59 1.22 3.06 3.62 39 E8_Aa NovelBoundary 0 2.96 24.01 3.31 21.18 11.29 0.00 10.11 10.51 7.47 9.67 0.00 5.85 19.48 2.12 4.45 7.69 8.23 0.00 0.00 8.95 0.00 6.25 0.00 40 ER8a ExonRegion 1 40.31 42.20 37.41 78.15 44.28 38.13 37.19 53.17 59.96 36.65 13.23 41.45 55.88 34.36 41.47 34.01 43.01 13.01 19.83 27.54 9.31 35.87 10.93 41 IG14 Intergenic 0 22.89 21.92 13.53 39.05 30.54 20.79 19.06 29.40 35.78 17.56 5.10 12.54 19.45 10.62 13.21 10.53 14.23 8.34 10.73 15.97 3.94 11.91 6.56 42 IG14_AR1 ActiveIntergenicRegion 0 27.99 19.62 27.41 77.19 58.02 45.03 31.08 45.74 69.95 41.95 17.05 37.87 50.53 34.58 37.57 20.90 36.18 8.99 17.08 26.61 8.67 35.50 8.75 43 IG14_SR1 SilentIntergenicRegion 0 22.92 19.31 10.59 28.66 23.83 15.14 15.20 22.25 26.90 11.68 3.09 7.13 13.23 6.42 9.75 9.85 11.23 8.95 10.08 13.28 3.78 8.20 6.86 44 IG14_AR2 ActiveIntergenicRegion 0 18.50 33.04 11.83 42.37 30.27 19.60 22.19 40.27 37.28 17.05 1.79 9.56 14.33 4.57 4.25 3.97 5.77 5.68 7.53 16.19 0.45 4.49 3.62