Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC22A17 Gene 0 27.70 147.28 283.47 279.09 75.20 69.46 38.29 356.36 682.99 443.79 0.07 0.13 0.00 0.05 0.07 0.05 1.08 694.08 328.33 255.86 163.81 150.71 210.07 2 354772 Transcript 0 4.33 1.18 7.49 9.47 3.65 1.67 1.69 8.94 18.65 10.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.45 29.13 6.77 2.18 2.20 6.14 3 474057 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 397267 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 397263 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 397260 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 206544 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 473917 Transcript 0 14.79 27.38 30.16 48.04 37.37 7.87 26.35 66.74 77.67 71.84 0.00 0.00 0.00 0.00 0.00 0.00 0.50 59.24 20.92 23.84 8.42 8.61 10.23 9 474774 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 IG43 Intergenic 0 5.19 21.15 16.62 12.30 9.09 0.54 25.20 11.11 5.06 10.45 0.00 0.00 0.00 0.00 0.00 0.00 0.10 20.06 19.30 12.13 21.28 18.35 23.34 11 IG43_AR2 ActiveIntergenicRegion 0 3.29 16.43 13.82 14.51 8.50 0.00 22.10 9.56 4.60 12.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.76 29.38 12.30 29.51 22.03 34.00 12 IG43_SR2 SilentIntergenicRegion 0 6.30 26.45 18.39 13.03 9.99 0.55 32.64 13.94 6.05 11.13 0.00 0.00 0.00 0.00 0.00 0.00 0.16 21.88 23.58 14.06 22.94 18.48 25.45 13 IG43_AR1 ActiveIntergenicRegion 0 5.49 17.30 21.03 14.86 9.57 0.83 15.99 8.89 4.82 12.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.37 9.88 11.51 20.23 21.96 22.19 14 ER1a ExonRegion 0 0.00 1.63 7.84 6.54 0.00 0.00 0.00 3.11 2.72 3.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.89 38.86 0.00 1.76 2.50 8.81 15 ER1b ExonRegion 0 7.15 17.37 38.62 44.61 8.32 18.54 8.77 37.98 41.59 37.60 0.00 0.00 0.00 0.92 0.00 0.00 0.00 170.04 412.98 18.40 48.18 83.17 147.47 16 E1_Ac KnownBoundary 0 9.71 18.35 45.83 62.20 7.81 20.84 8.61 29.16 37.96 19.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.76 416.01 12.34 20.94 87.32 147.59 17 E1_Ad KnownBoundary 0 37.71 47.03 93.20 117.97 33.02 58.83 24.91 127.58 232.06 181.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 733.81 1174.15 137.61 227.34 221.97 553.15 18 ER1c ExonRegion 0 20.97 40.86 87.00 110.77 22.38 46.18 23.47 119.26 165.17 138.88 0.00 0.00 0.00 1.62 0.00 0.00 0.00 523.25 1013.81 103.09 178.70 213.66 446.64 19 ER1d ExonRegion 0 6.25 26.71 104.77 78.61 11.65 22.01 9.01 116.82 204.41 180.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 388.70 452.31 103.50 118.80 105.26 206.32 20 E1a_E2a KnownJunction 0 7.56 54.27 152.24 171.17 8.40 11.36 8.39 172.80 394.15 277.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 933.07 361.80 169.19 65.61 135.39 330.01 21 ER2a ExonRegion 0 3.41 42.93 124.83 80.28 15.23 42.28 16.41 102.54 279.71 258.71 0.00 0.00 0.00 0.00 0.00 0.00 0.92 397.58 126.36 133.89 76.98 70.13 105.70 22 E2_Ab KnownBoundary 0 3.41 90.97 228.50 197.78 19.10 60.59 15.28 179.82 462.93 389.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 869.77 136.76 178.97 89.64 106.55 112.25 23 ER2b ExonRegion 0 18.04 91.23 269.17 204.81 45.36 56.86 33.63 262.57 618.55 473.19 0.00 0.22 0.00 0.00 0.32 0.47 1.57 848.82 275.91 217.90 195.30 155.16 193.68 24 E2a_E3a KnownJunction 0 9.78 101.69 310.01 262.87 73.85 54.12 32.64 332.04 780.81 474.44 0.00 6.30 0.00 0.00 0.00 0.00 4.58 1018.34 230.31 208.05 224.07 144.33 146.91 25 E2a_E4b KnownJunction 0 6.59 0.00 8.93 5.49 3.48 2.33 3.27 5.54 12.09 18.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.98 4.80 5.75 3.09 9.00 0.00 26 ER3a ExonRegion 0 11.76 96.26 364.24 347.23 60.77 66.56 40.46 388.00 939.07 558.96 0.00 1.08 0.00 0.00 1.00 0.00 1.62 1214.95 337.53 266.26 212.59 174.63 265.65 27 E3_Da NovelBoundary 0 3.04 12.04 8.01 14.68 8.32 0.00 21.77 31.26 51.48 51.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.73 14.02 9.08 11.06 2.76 0.00 28 E3a_E4b KnownJunction 0 21.41 119.12 384.17 347.01 60.70 80.58 34.14 463.23 1032.54 659.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 867.45 289.14 293.76 191.14 163.55 260.19 29 I3 Intron 0 6.58 34.04 29.47 54.98 48.66 13.25 40.71 96.25 122.94 98.33 0.00 0.34 0.00 0.00 0.00 0.00 0.21 81.55 29.31 33.27 14.87 14.39 13.37 30 I3_AR1 ActiveIntronRegion 0 6.78 34.23 30.45 55.96 41.80 12.10 42.03 107.89 144.41 111.11 0.00 0.72 0.00 0.00 0.00 0.00 0.45 89.38 33.82 37.88 17.25 14.26 13.47 31 I3_SR2 SilentIntronRegion 0 6.97 35.78 30.29 59.52 64.15 16.87 46.09 94.27 115.19 94.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.23 24.48 30.91 13.54 15.93 13.36 32 I3_AR2 ActiveIntronRegion 0 11.29 72.53 41.17 62.06 49.23 16.87 48.63 124.68 141.79 109.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 147.70 59.88 22.84 22.92 28.61 32.30 33 I3_AR3 ActiveIntronRegion 0 5.08 28.18 32.29 51.19 28.33 6.03 18.59 77.99 73.00 82.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81.22 33.43 28.76 13.11 9.86 16.95 34 E4_Aa NovelBoundary 0 13.34 32.03 46.72 72.98 53.06 11.30 26.01 112.91 128.07 117.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92.73 29.84 23.59 31.07 17.70 16.73 35 ER4a ExonRegion 0 14.79 27.38 30.16 48.04 37.37 7.87 26.35 66.74 77.67 71.84 0.00 0.00 0.00 0.00 0.00 0.00 0.50 59.24 20.92 23.84 8.42 8.61 10.23 36 E4_Ab KnownBoundary 0 0.00 22.89 32.79 35.96 14.77 12.38 41.20 68.43 44.70 54.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.67 26.54 20.65 5.56 10.47 15.28 37 ER4b ExonRegion 0 20.70 132.20 313.53 263.54 82.62 86.75 46.68 393.35 832.42 538.81 0.00 1.18 0.00 0.00 0.00 0.00 0.00 916.92 323.46 229.90 203.96 180.86 227.88 38 E4_Da NovelBoundary 0 13.78 5.92 24.16 73.22 7.89 10.79 18.72 85.60 73.47 110.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68.81 50.82 20.84 67.34 26.27 40.46 39 E4a_E5a KnownJunction 0 50.08 342.50 405.93 376.08 126.40 99.03 64.21 435.14 952.83 567.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1312.91 449.61 351.03 185.83 173.29 344.27 40 E4a_E5b KnownJunction 0 3.41 3.09 11.00 10.35 3.74 0.00 0.00 11.17 4.11 14.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.54 4.80 6.39 19.46 23.64 23.22 41 I4 Intron 0 8.05 11.71 18.21 38.84 25.04 11.32 18.65 48.72 47.50 59.40 0.00 0.00 0.00 0.00 0.00 0.00 1.02 50.24 42.25 14.44 49.14 23.78 32.62 42 I4_AR1 ActiveIntronRegion 0 8.08 11.75 18.28 38.99 25.14 11.36 18.73 48.92 47.69 59.64 0.00 0.00 0.00 0.00 0.00 0.00 1.02 50.45 42.42 14.50 49.34 23.88 32.74 43 E5_Aa NovelBoundary 0 3.78 39.20 24.42 66.92 28.27 10.85 17.14 68.59 54.95 66.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 109.64 30.49 17.83 55.60 29.09 45.93 44 ER5a ExonRegion 0 61.73 296.34 232.25 242.28 116.71 133.45 76.94 339.44 737.80 470.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 727.13 381.94 334.43 197.09 181.91 302.68 45 E5_Ab KnownBoundary 0 256.71 825.05 468.97 592.47 284.89 312.32 186.90 785.62 1380.17 887.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1334.18 876.17 773.01 318.22 305.19 702.54 46 ER5b ExonRegion 0 94.08 349.78 289.59 347.47 138.20 156.70 87.48 443.48 857.54 558.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 579.22 584.20 323.14 213.76 258.83 345.13 47 E5_Da NovelBoundary 0 10.59 16.12 6.59 34.09 21.65 5.22 22.26 39.31 39.29 33.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.40 38.40 6.01 53.93 19.78 10.84 48 E5a_E6a KnownJunction 0 45.64 190.36 255.73 227.44 112.65 104.31 72.43 306.82 644.15 367.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 397.33 466.18 141.96 173.41 207.15 121.47 49 ER6a ExonRegion 0 46.76 240.60 297.59 281.48 93.40 87.70 61.39 410.03 823.82 512.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 583.91 407.32 320.98 232.88 184.85 232.47 50 E6_Ab KnownBoundary 0 48.01 303.17 494.45 540.36 130.22 65.59 79.89 626.13 1256.93 805.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 940.04 422.32 602.36 273.18 286.82 312.51 51 ER6b ExonRegion 0 28.57 200.85 493.31 603.60 86.83 82.77 58.96 667.82 1272.79 759.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1288.41 590.04 560.67 236.35 293.85 376.38 52 E6_Da NovelBoundary 0 14.00 28.81 119.72 127.32 48.64 10.45 15.50 174.44 143.46 119.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 175.97 68.71 29.15 28.11 17.08 11.95 53 E6a_E7a KnownJunction 0 41.79 186.94 556.37 747.92 126.23 80.98 16.43 797.53 1519.83 816.44 0.00 0.00 0.00 0.00 0.00 0.00 3.74 1811.02 979.98 623.13 204.61 403.77 633.56 54 E6a_E8a KnownJunction 0 3.78 12.04 24.90 28.33 7.81 8.57 27.34 39.60 32.87 37.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 115.36 48.66 11.38 20.02 16.29 23.47 55 E6a_E9a NovelJunction 0 0.00 0.00 4.32 1.66 0.00 0.00 0.00 0.00 6.94 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.15 0.00 0.00 7.10 8.08 19.89 56 I6 Intron 0 7.90 30.99 48.27 29.68 32.45 22.24 15.23 59.27 65.82 52.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.56 24.76 25.14 11.65 11.66 6.39 57 I6_SR1 SilentIntronRegion 0 8.00 31.37 48.84 30.03 32.84 22.50 15.42 59.99 66.63 52.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.04 25.07 25.43 11.79 11.81 6.47 58 E7_Aa NovelBoundary 0 20.82 76.04 173.80 144.10 64.77 63.32 29.68 214.24 181.83 153.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.98 58.35 58.55 27.68 23.57 27.91 59 ER7a ExonRegion 0 36.92 286.29 518.67 675.28 283.20 178.50 53.42 750.03 1382.23 734.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1345.86 798.84 560.38 249.75 302.90 508.37 60 E7_Da NovelBoundary 0 20.52 33.42 99.58 103.78 45.08 32.99 38.24 111.11 130.35 131.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 102.14 52.52 29.72 16.99 8.33 7.43 61 E7a_E8a KnownJunction 0 66.31 445.78 524.29 781.29 482.77 294.89 81.13 724.18 1379.07 756.46 1.95 0.00 0.00 0.00 0.00 0.00 0.00 1317.76 725.39 601.27 282.14 327.29 496.98 62 I7 Intron 0 9.52 28.05 43.93 39.74 20.60 14.12 16.14 59.48 50.18 48.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.27 19.41 19.11 12.02 8.02 10.36 63 I7_SR1 SilentIntronRegion 0 9.64 28.39 44.46 40.23 20.86 14.30 16.34 60.23 50.81 48.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.96 19.66 19.35 12.17 8.12 10.49 64 E8_Aa NovelBoundary 0 16.00 54.53 97.99 126.52 83.53 37.93 8.88 110.00 151.76 125.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 151.39 46.21 45.76 20.08 21.92 11.44 65 ER8a ExonRegion 0 76.64 412.72 525.60 628.06 142.32 129.81 75.57 730.04 1335.84 811.76 0.66 0.00 0.00 0.00 0.00 0.00 1.54 1355.68 514.64 497.39 269.49 270.54 361.03 66 E8_Da KnownBoundary 0 30.23 136.09 209.42 136.18 25.55 26.41 50.39 287.27 338.62 286.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 380.58 99.77 102.33 64.31 42.80 42.34 67 E8a_E9a KnownJunction 0 77.35 391.18 539.75 773.49 176.66 114.76 46.94 573.23 1299.47 711.68 2.68 0.00 0.00 0.00 0.00 0.00 0.00 1347.86 500.44 457.07 219.43 247.38 325.06 68 ER8b ExonRegion 0 19.68 91.93 177.20 119.91 63.33 20.38 42.61 252.00 278.95 247.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 340.29 101.05 105.12 44.12 42.13 41.98 69 E8b_E9a KnownJunction 0 27.56 82.09 177.85 148.43 87.52 20.73 49.99 254.33 297.45 239.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 352.23 87.44 116.01 34.22 44.39 44.30 70 ER9a ExonRegion 0 49.07 273.59 614.07 684.34 190.82 177.23 83.88 720.41 1249.55 811.58 1.00 0.00 0.00 0.00 0.00 0.00 0.92 1352.83 553.60 475.14 242.04 327.04 346.09 71 E9_Da KnownBoundary 0 43.79 223.91 642.26 613.74 142.95 200.06 76.93 715.55 1206.41 759.25 0.00 0.00 0.00 0.00 0.00 0.00 4.30 1212.80 459.78 384.27 236.11 261.77 263.69 72 ER9b ExonRegion 0 53.86 216.75 513.66 462.65 112.61 163.11 57.07 555.82 1008.36 649.09 0.00 0.00 0.00 0.00 0.00 0.00 2.05 945.82 369.34 375.60 210.91 221.72 268.35 73 E9b_E10a KnownJunction 0 40.23 195.75 609.77 566.10 71.82 101.53 43.01 609.91 1157.42 713.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1376.83 233.23 360.88 155.37 131.59 175.25 74 ER10a ExonRegion 0 24.53 151.43 370.39 336.37 71.08 60.22 26.56 466.81 837.17 519.18 0.00 0.00 0.00 0.00 0.00 0.00 2.50 639.13 322.62 311.18 190.44 151.24 200.70 75 ER10b ExonRegion 0 17.64 41.69 59.43 77.00 56.19 22.01 19.64 122.43 234.26 100.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105.32 91.84 91.13 41.14 18.40 67.54 76 ER10c ExonRegion 0 13.76 24.74 44.11 54.97 38.80 17.73 14.34 79.22 162.83 64.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.07 68.49 58.16 24.24 7.99 48.45 77 ER10d ExonRegion 0 12.70 14.24 21.44 34.07 18.73 7.34 10.59 46.67 96.96 44.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.58 49.37 32.98 6.61 5.21 26.43 78 ER10e ExonRegion 0 10.58 7.12 17.77 28.62 13.38 6.42 10.59 41.48 74.72 35.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.97 41.41 25.53 6.61 4.17 19.09 79 ER10f ExonRegion 0 8.66 0.74 7.13 12.39 7.30 3.33 3.37 14.77 34.58 17.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.01 19.40 13.54 2.60 1.89 3.47 80 IG42_AR1 ActiveIntergenicRegion 0 2.01 5.15 13.30 13.51 5.09 2.31 2.10 48.95 68.19 27.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.72 20.18 14.80 4.19 3.96 9.48