Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-199F6.2 Gene 0 9.77 0.81 3.61 1.47 6.18 2.42 7.69 1.36 4.37 4.06 4.08 15.66 1.53 10.49 3.69 25.70 5.88 11.22 6.30 1.68 6.25 1.51 5.23 2 458001 Transcript 0 10.34 0.40 2.20 1.41 5.92 1.47 8.30 0.47 3.52 4.08 3.89 11.07 1.29 7.36 4.75 23.99 5.77 7.56 4.16 0.55 2.41 0.61 3.19 3 IG24_AR1 ActiveIntergenicRegion 0 13.22 1.44 25.55 11.14 15.34 4.77 5.23 18.30 8.09 10.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.08 8.56 21.80 20.79 4 ER1a ExonRegion 0 56.60 1.67 0.00 2.55 33.02 7.42 63.12 0.00 4.44 6.10 21.14 3.77 0.00 23.97 14.32 95.49 27.74 6.08 18.29 0.00 0.00 0.00 14.49 5 E1_Da NovelBoundary 0 14.08 0.00 12.71 7.59 12.99 13.29 8.13 2.42 1.68 1.34 0.00 6.30 0.00 2.12 0.00 8.54 0.00 14.72 4.80 0.00 6.18 0.00 0.00 6 E1a_E2a KnownJunction 0 3.78 0.00 0.00 3.26 0.00 0.00 0.00 0.00 7.03 8.38 2.42 18.46 0.00 0.00 0.00 12.05 0.00 1.78 0.00 0.00 0.00 0.00 0.00 7 I1 Intron 0 5.49 0.65 9.65 3.48 1.14 2.05 5.46 1.53 2.01 1.34 3.09 6.17 0.39 16.48 4.59 5.99 3.10 5.03 1.32 0.53 1.40 0.57 0.45 8 I1_SR1 SilentIntronRegion 0 5.73 0.63 9.93 3.73 1.24 2.18 5.68 1.59 2.18 1.26 3.35 6.40 0.42 17.06 4.45 6.28 3.31 5.41 1.38 0.52 1.45 0.55 0.45 9 I1_AR1 ActiveIntronRegion 0 2.91 4.07 10.72 8.35 1.00 0.00 5.30 0.00 2.32 4.01 1.93 15.15 4.10 22.13 13.06 3.72 0.00 3.70 0.00 2.13 2.20 0.00 0.00 10 I1_SR2 SilentIntronRegion 0 4.23 4.07 7.88 6.33 2.68 0.00 4.54 2.47 2.47 3.44 1.93 12.37 0.00 15.78 11.61 2.97 0.00 3.70 0.00 0.00 1.57 0.00 0.00 11 I1_AR2 ActiveIntronRegion 0 3.48 0.61 7.24 1.00 0.25 1.02 3.54 0.98 0.38 1.94 0.84 3.75 0.00 11.19 5.41 3.55 1.38 1.72 0.89 0.59 0.92 0.87 0.41 12 Ix Intron 0 28.68 14.11 28.76 23.04 5.75 17.78 6.85 4.40 14.70 1.98 1.49 6.44 1.03 6.09 1.47 3.60 2.91 24.73 10.00 27.89 15.65 12.16 25.56 13 Ix_AR1 ActiveIntronRegion 0 28.74 14.14 28.83 23.09 5.76 17.81 6.87 4.41 14.73 1.98 1.49 6.45 1.04 6.11 1.47 3.61 2.92 24.78 10.02 27.95 15.69 12.19 25.61 14 Ix Intron 0 19.36 8.69 19.52 18.96 2.93 13.76 5.53 4.09 12.98 1.78 0.28 3.60 0.37 5.03 1.48 3.25 2.13 30.66 6.49 16.38 14.13 9.51 16.64 15 Ix_AR1 ActiveIntronRegion 0 20.52 9.14 20.73 21.07 3.38 13.94 5.88 4.75 13.98 1.91 0.35 3.97 0.41 4.87 1.46 2.99 2.19 33.54 7.46 17.81 15.50 10.29 17.05 16 Ix_SR1 SilentIntronRegion 0 21.69 12.20 16.34 17.26 3.12 14.82 6.62 3.46 16.16 1.15 0.00 0.00 3.13 5.28 2.90 18.58 0.00 22.94 2.39 16.84 4.22 2.95 11.50 17 Ix_AR2 ActiveIntronRegion 0 21.70 8.13 15.84 5.51 3.74 1.16 4.26 2.94 7.29 3.58 0.36 4.02 0.00 3.59 1.26 2.69 0.92 8.77 4.86 7.37 3.70 1.16 5.94 18 Ix Intron 0 11.70 2.86 9.24 8.47 3.21 2.39 5.32 1.61 5.76 4.72 1.91 13.49 0.81 8.39 1.85 6.04 2.24 10.30 3.82 6.44 3.91 2.82 5.97 19 Ix_SR2 SilentIntronRegion 0 12.12 2.07 8.63 7.77 3.07 1.59 5.36 1.88 4.78 5.90 1.69 16.66 1.51 9.98 2.06 6.83 2.86 9.74 3.03 6.08 4.72 2.05 8.07 20 Ix_AR1 ActiveIntronRegion 0 7.94 1.53 0.00 0.00 6.02 0.00 1.99 0.00 0.00 0.00 0.00 16.62 0.00 4.85 1.54 0.00 0.00 1.39 2.39 4.79 3.31 1.56 4.40 21 Ix_AR2 ActiveIntronRegion 0 23.26 4.37 10.82 6.33 11.57 6.76 10.26 3.29 11.39 5.60 1.06 15.74 0.00 7.09 0.00 12.40 0.00 12.10 6.10 4.62 9.55 2.93 7.04 22 E2_Aa NovelBoundary 0 38.23 6.71 11.38 17.88 8.32 15.73 6.05 0.00 9.40 3.57 0.00 19.96 0.00 0.00 0.00 0.00 0.00 27.65 11.20 12.40 19.34 8.08 37.65 23 ER2a ExonRegion 0 0.60 0.00 0.00 0.56 0.00 0.08 0.03 0.00 1.14 1.64 1.65 12.25 0.00 0.35 0.10 1.76 3.41 0.00 0.04 0.00 0.00 0.00 0.00 24 E2_Da NovelBoundary 0 31.26 0.00 16.17 14.78 0.00 8.23 1.72 4.52 23.32 6.45 2.26 6.30 0.00 0.00 0.00 3.33 13.37 53.56 21.74 19.69 35.27 6.00 22.62 25 E2a_E3a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E2a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 8.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix Intron 0 26.07 2.47 10.77 8.81 4.64 5.09 5.97 4.02 17.88 4.45 3.35 8.84 0.67 9.91 1.42 19.59 6.87 28.36 6.08 16.24 24.46 10.84 16.30 28 Ix_AR5 ActiveIntronRegion 0 28.29 2.73 11.73 9.60 5.13 5.63 6.29 4.44 19.46 4.92 3.57 9.28 0.74 10.61 1.57 21.65 7.19 31.01 6.72 17.53 26.30 11.84 17.86 29 E3_Aa NovelBoundary 0 216.33 59.46 167.85 194.11 34.30 147.13 33.48 83.05 135.36 44.38 0.00 18.46 0.00 6.89 0.00 11.71 3.65 118.93 51.11 133.65 568.29 168.02 233.30 30 ER3a ExonRegion 0 3.84 0.00 0.77 2.62 2.65 0.00 1.93 0.00 4.51 2.72 1.71 10.07 0.43 6.02 2.36 15.80 1.68 8.92 1.74 0.00 0.00 0.57 1.60 31 E3a_E4a KnownJunction 0 10.59 0.00 6.33 1.73 8.49 0.00 2.12 0.00 4.83 8.78 0.00 18.91 6.82 7.36 19.53 43.83 9.26 20.60 0.00 0.00 0.00 0.00 0.00 32 Ix Intron 0 33.01 5.87 13.94 19.11 3.86 19.75 5.14 6.91 31.90 3.17 0.00 5.16 0.16 1.21 0.34 1.35 1.09 28.12 11.70 22.74 38.19 16.08 29.32 33 Ix_SR1 SilentIntronRegion 0 35.48 6.54 15.34 20.92 4.22 20.21 5.42 7.72 36.65 3.67 0.00 6.16 0.03 1.44 0.39 1.27 0.97 30.04 11.53 24.45 39.24 17.21 31.56 34 Ix_AR2 ActiveIntronRegion 0 21.95 2.58 7.31 10.45 2.54 19.98 4.56 3.07 8.51 0.72 0.00 0.00 1.05 0.07 0.00 1.88 2.09 22.30 15.10 15.17 39.17 12.05 19.85 35 E4_Aa NovelBoundary 0 33.19 20.59 34.00 33.80 6.62 28.96 11.13 9.57 32.29 13.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.04 7.62 31.83 164.51 39.56 53.52 36 ER4a ExonRegion 0 5.45 0.00 4.58 0.77 1.89 1.09 3.43 0.77 4.40 3.21 1.73 7.14 0.69 8.22 1.95 17.26 4.21 10.57 2.14 0.00 9.88 2.49 5.26 37 E4_Da NovelBoundary 0 10.45 0.00 7.45 6.06 15.20 0.00 6.23 6.57 15.51 8.06 5.32 12.15 0.00 12.13 6.30 24.35 18.79 31.13 4.80 5.94 17.30 3.06 0.00 38 E4a_E5a KnownJunction 0 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 1.91 3.76 0.00 0.00 0.00 0.00 39 Ix_AR2 ActiveIntronRegion 0 5.89 0.00 2.24 0.63 6.62 2.83 1.23 1.59 2.76 3.17 2.39 10.86 2.64 8.03 2.80 14.37 5.96 9.94 0.98 3.79 16.47 1.29 4.34 40 E5_Aa NovelBoundary 0 13.48 0.00 4.67 0.00 3.40 0.00 7.64 4.68 8.13 2.63 4.69 12.00 8.28 16.42 5.07 20.59 3.83 27.57 0.00 12.02 23.60 0.00 3.84 41 ER5a ExonRegion 0 8.85 1.96 7.05 1.17 7.21 4.59 4.07 3.47 5.31 5.88 4.09 29.02 3.72 15.34 4.47 29.75 5.63 18.19 11.49 4.91 11.85 2.41 7.35