Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL137244.2 Gene 0 0.50 0.42 0.54 0.54 0.08 0.11 0.20 0.15 0.44 0.56 0.00 0.42 0.11 0.00 0.00 0.00 0.00 0.00 0.09 0.06 0.00 0.00 0.00 2 499458 Transcript 0 0.50 0.28 0.13 0.41 0.02 0.03 0.05 0.04 0.11 0.14 0.00 0.10 0.03 0.00 0.00 0.00 0.00 0.00 0.02 0.01 0.00 0.00 0.00 3 ER1a ExonRegion 0 0.45 0.43 0.64 0.64 0.09 0.13 0.23 0.18 0.51 0.66 0.00 0.50 0.14 0.00 0.00 0.00 0.00 0.00 0.11 0.07 0.00 0.00 0.00 4 E1_Da NovelBoundary 0 23.34 12.30 18.66 27.27 41.77 36.57 22.08 36.10 22.80 30.60 5.32 13.20 0.00 4.59 0.00 10.85 0.00 1.78 0.00 14.38 0.00 5.02 4.35 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 18.51 39.68 4.67 18.04 25.20 16.29 10.69 5.20 8.67 11.96 1.82 12.82 9.39 2.65 4.04 4.00 1.33 0.25 1.71 6.30 0.00 3.08 0.00 7 Ix_SR1 SilentIntronRegion 0 18.56 39.77 4.68 18.08 25.26 16.33 10.72 5.21 8.69 11.99 1.83 12.85 9.42 2.65 4.05 4.01 1.34 0.25 1.72 6.32 0.00 3.09 0.00 8 Ix Intron 0 6.78 19.14 6.21 11.95 22.22 8.64 8.40 7.24 13.24 13.30 2.40 6.48 3.54 3.88 3.31 2.91 3.24 1.14 2.50 7.93 0.29 1.91 1.92 9 Ix_SR1 SilentIntronRegion 0 6.79 19.17 6.22 11.97 22.25 8.65 8.41 7.25 13.26 13.32 2.40 6.48 3.54 3.88 3.32 2.92 3.24 1.14 2.50 7.94 0.29 1.91 1.92 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.06 0.00 0.01 0.00 0.00 0.05 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 Ix Intron 0 7.32 9.51 5.97 8.49 9.30 6.25 7.88 5.36 6.33 6.12 4.79 16.87 13.13 11.54 6.03 7.52 7.10 1.69 2.90 12.81 0.99 3.19 1.92 13 Ix_AR2 ActiveIntronRegion 0 0.00 12.46 14.70 16.18 1.34 3.67 6.62 6.91 9.11 9.18 15.46 30.31 17.00 4.87 7.98 2.97 15.68 0.00 0.00 18.09 2.20 4.17 0.00 14 Ix_AR3 ActiveIntronRegion 0 1.06 13.56 15.32 10.90 2.68 4.89 6.62 6.34 10.70 8.22 13.53 30.31 18.76 6.50 8.22 0.50 11.55 0.00 0.00 18.09 4.41 4.17 2.94 15 Ix_AR4 ActiveIntronRegion 0 8.47 13.22 9.11 10.56 2.68 7.34 4.96 6.91 9.19 6.38 9.42 20.56 19.93 10.96 5.98 2.97 5.98 0.00 0.60 12.77 4.41 5.08 2.94 16 Ix_AR5 ActiveIntronRegion 0 17.18 20.10 4.30 8.71 3.71 5.98 3.88 6.59 3.68 4.99 2.46 13.65 16.77 11.90 2.36 6.47 7.07 0.00 1.76 4.83 1.35 2.82 0.76 17 Ix_SR2 SilentIntronRegion 0 4.65 6.70 7.58 8.43 9.79 8.95 7.43 2.51 2.47 5.21 5.42 12.40 13.16 12.00 4.81 7.26 5.64 2.81 1.17 5.45 1.08 2.54 2.87 18 Ix_AR6 ActiveIntronRegion 0 5.10 10.30 6.97 9.63 13.72 9.67 13.38 9.25 6.91 3.89 6.28 17.69 18.78 17.94 7.64 9.94 6.12 3.47 2.90 13.60 0.49 4.85 1.63 19 Ix_SR3 SilentIntronRegion 0 8.10 8.18 3.64 6.61 5.43 4.67 7.98 5.17 4.21 4.67 2.08 17.67 9.90 9.99 3.58 6.08 7.07 0.52 1.07 8.18 0.00 3.94 1.11 20 Ix_SR4 SilentIntronRegion 0 5.60 6.95 1.84 8.27 9.16 7.08 11.21 6.14 8.29 9.07 8.31 32.35 16.22 14.30 6.85 8.82 10.74 3.00 3.03 23.58 1.94 2.04 3.00 21 Ix_AR7 ActiveIntronRegion 0 4.92 7.64 1.71 5.85 11.41 5.16 8.43 7.42 8.32 4.83 6.11 23.31 9.33 18.13 5.47 7.92 6.80 1.40 4.97 20.77 2.08 4.73 0.41 22 ER3a ExonRegion 0 2.04 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00