Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-30E17.1 Gene 0 21.27 18.65 11.45 15.04 16.71 4.10 20.22 12.49 24.91 11.47 7.24 23.06 21.57 16.05 18.47 9.50 10.74 18.02 16.46 15.01 7.68 11.92 9.21 2 456602 Transcript 0 16.61 8.95 7.94 6.34 8.07 1.88 12.65 6.71 14.47 4.92 5.64 14.83 11.14 12.16 11.11 5.74 10.53 17.40 12.33 11.06 6.54 7.92 10.34 3 ER1a ExonRegion 0 10.22 5.48 2.76 1.89 3.23 6.09 11.61 6.68 6.75 3.07 1.51 3.41 0.00 4.14 3.67 4.48 3.54 11.25 9.61 6.52 1.76 1.97 2.66 4 E1_Da NovelBoundary 0 0.00 2.57 6.65 14.52 0.00 0.00 4.02 12.40 4.28 4.73 0.00 12.75 0.00 2.24 4.45 0.00 16.92 13.43 17.88 11.57 8.46 6.25 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 2.89 3.09 5.11 5.70 0.00 0.00 0.00 0.00 8.42 1.87 0.00 2.43 2.59 2.33 0.00 6 I1 Intron 0 3.49 1.79 2.31 3.26 3.81 0.37 4.28 2.74 2.12 1.89 1.97 22.25 8.80 5.24 3.25 2.42 2.69 2.31 3.24 3.75 1.25 2.12 1.20 7 I1_AR1 ActiveIntronRegion 0 5.18 2.17 4.56 6.75 5.19 0.35 3.34 4.82 3.42 3.11 4.36 22.90 8.11 11.61 8.02 5.62 3.48 4.24 7.51 5.01 2.29 4.49 1.94 8 I1_SR1 SilentIntronRegion 0 2.97 1.67 1.60 2.16 3.38 0.38 4.59 2.08 1.72 1.51 1.22 22.07 9.03 3.23 1.75 1.41 2.44 1.70 1.90 3.36 0.92 1.37 0.96 9 E2_Aa NovelBoundary 0 18.00 3.35 0.00 4.56 3.65 0.00 18.95 4.93 0.00 0.00 4.63 18.76 29.71 2.59 20.40 0.00 4.49 4.23 0.00 0.00 3.03 0.00 0.00 10 ER2a ExonRegion 0 8.78 7.76 4.53 5.92 9.65 5.36 13.25 6.63 10.64 3.99 7.12 21.02 22.47 15.21 22.66 12.02 6.73 15.01 20.90 21.47 7.01 10.90 11.97 11 E2_Da NovelBoundary 0 22.60 15.26 36.43 13.92 4.16 8.35 19.83 8.38 10.85 24.31 0.00 6.15 7.95 2.53 5.44 28.88 28.14 35.28 19.01 18.15 21.56 3.12 8.62 12 E2a_E3a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.33 1.50 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 8.94 0.00 2.84 3.12 7.94 13 I2_SR2 SilentIntronRegion 0 4.21 2.80 0.00 3.11 4.92 3.37 5.47 1.97 3.95 2.35 0.89 10.45 15.38 3.16 2.14 3.19 4.55 5.93 6.34 6.52 1.35 4.47 4.05 14 E3_Aa NovelBoundary 0 13.11 0.00 0.00 3.63 7.39 0.00 10.95 1.97 8.71 0.00 2.21 24.91 0.00 2.47 4.45 6.49 4.77 16.17 4.80 2.88 10.50 5.20 8.54 15 ER3a ExonRegion 0 7.01 2.30 2.45 5.30 4.91 0.84 9.28 4.69 5.63 2.00 3.30 17.61 11.21 7.14 7.56 6.51 9.10 6.86 6.17 6.41 5.06 8.17 6.53 16 E3_Da NovelBoundary 0 0.00 0.00 0.00 1.70 0.00 0.00 1.81 0.00 1.71 1.42 4.74 18.16 6.82 2.12 4.45 3.25 3.65 3.94 3.95 9.01 3.03 0.00 4.18 17 E3a_E4a KnownJunction 0 17.63 6.12 6.89 0.00 0.00 2.56 2.25 0.00 8.33 1.13 7.37 12.75 6.82 10.24 4.45 3.59 4.77 0.00 9.04 0.00 0.00 8.08 3.41 18 E4_Aa NovelBoundary 0 8.96 2.63 1.21 1.80 16.81 2.78 6.32 2.18 5.79 2.39 2.16 0.00 25.81 4.94 0.00 11.36 3.46 0.00 0.00 11.89 3.03 2.69 0.00 19 ER4a ExonRegion 0 23.93 6.89 8.02 7.05 10.54 0.83 5.86 5.10 16.63 4.32 6.34 17.48 33.86 21.53 14.82 7.72 12.08 22.60 22.80 9.63 8.65 6.94 9.99 20 E4_Da NovelBoundary 0 13.71 0.00 0.00 0.00 12.99 0.00 18.59 11.21 13.43 2.71 2.42 52.37 26.46 2.47 4.45 0.00 0.00 7.01 9.04 13.68 0.00 2.69 0.00 21 E4a_E5a KnownJunction 0 22.74 5.99 10.05 8.22 7.39 0.00 11.75 3.53 11.98 4.16 4.95 25.51 13.64 12.07 18.30 0.00 17.67 27.73 4.80 21.22 3.15 2.76 21.51 22 ER5a ExonRegion 0 23.85 9.51 13.44 6.50 12.14 0.20 24.35 10.59 25.34 5.37 6.80 19.02 6.87 15.98 16.73 3.18 19.39 39.86 12.29 17.74 12.67 7.22 20.35 23 E5_Da NovelBoundary 0 10.45 5.85 3.43 3.56 3.40 0.00 11.92 0.00 3.12 1.40 0.00 0.00 0.00 2.47 6.06 0.00 0.00 0.00 4.61 0.00 0.00 6.00 0.00 24 E5a_E6a KnownJunction 0 35.27 25.13 22.09 11.72 16.30 0.00 31.31 14.99 32.52 7.41 10.11 11.55 0.00 27.25 10.63 14.61 16.64 45.02 22.12 18.66 19.03 20.08 19.72 25 E6_Aa NovelBoundary 0 20.00 11.58 0.00 2.06 14.18 8.52 1.85 1.60 1.56 1.07 5.37 6.30 0.00 0.00 0.00 12.22 0.00 8.12 0.00 6.01 5.68 0.00 0.00 26 ER6a ExonRegion 0 29.47 29.30 17.12 23.19 24.59 4.81 27.19 17.66 37.14 18.11 9.40 29.10 27.65 20.20 23.34 11.08 12.74 21.18 19.01 17.54 9.18 15.56 9.70 27 IG11_SR1 SilentIntergenicRegion 0 1.85 6.43 5.97 5.31 9.04 3.60 14.86 5.34 13.04 4.28 0.63 17.54 13.17 5.86 3.53 0.32 1.80 5.31 1.39 9.51 0.48 3.63 1.92 28 IG11_AR1 ActiveIntergenicRegion 0 3.12 12.19 5.56 11.77 27.35 3.24 19.12 11.64 25.32 7.39 3.23 31.66 15.43 7.29 2.65 3.50 2.59 5.70 6.89 10.45 1.73 7.17 6.07