Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ING1 Gene 0 31.42 21.21 25.55 14.52 35.09 17.65 27.91 24.12 22.97 29.75 42.75 55.38 32.26 42.87 35.95 31.51 24.78 21.88 18.16 21.77 31.39 194.45 98.66 2 338450 Transcript 0 0.00 0.00 1.54 0.00 0.28 0.19 0.14 0.27 0.58 1.43 0.81 1.21 1.31 0.27 0.22 1.25 0.35 2.32 0.67 3.14 2.79 0.44 0.62 3 333219 Transcript 0 1.07 0.00 0.00 0.13 1.91 0.21 0.01 0.15 0.20 0.00 3.57 0.73 0.00 1.73 0.55 2.35 1.41 0.80 0.80 1.21 1.70 2.04 2.75 4 375775 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 5 375777 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 375774 Transcript 0 1.28 0.50 3.82 0.07 0.47 0.76 3.57 4.13 3.44 2.45 13.60 1.08 3.18 4.40 4.07 5.17 14.84 3.67 3.38 3.08 19.08 20.58 25.49 7 464141 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.00 3.08 0.00 0.56 0.39 0.28 0.54 1.16 2.86 1.63 2.42 2.62 0.54 0.44 2.51 0.70 4.63 1.34 6.28 5.57 0.88 1.25 9 E1_Da NovelBoundary 0 0.00 3.22 5.41 1.70 0.00 0.00 0.00 0.00 1.71 1.29 2.26 0.00 6.33 0.00 0.00 15.04 0.00 4.31 0.00 6.20 0.00 2.57 0.00 10 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Aa NovelBoundary 1 0.00 0.00 10.97 3.26 8.32 5.79 0.00 14.87 11.17 9.51 7.32 0.00 6.49 9.42 14.59 46.91 0.00 21.22 17.04 19.81 5.00 8.33 16.22 12 ER2a ExonRegion 0 0.59 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.18 2.20 0.00 0.11 0.00 0.83 0.69 0.77 0.30 0.67 0.35 0.58 0.00 13 E2_Ab KnownBoundary 0 2.82 2.50 11.59 2.06 0.00 2.16 5.74 5.54 4.83 2.90 10.16 0.00 0.00 9.71 9.52 16.49 4.21 8.83 8.75 7.99 5.99 11.51 15.11 14 ER2b ExonRegion 0 0.40 0.82 0.00 0.00 0.74 0.00 0.48 0.00 0.75 0.00 2.56 3.20 0.00 0.39 0.97 0.00 1.21 0.82 0.88 0.76 0.87 0.02 1.24 15 E2_Da KnownBoundary 0 3.56 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 4.58 3.65 0.00 0.00 3.15 0.00 0.00 16 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 17 ER2c ExonRegion 0 0.50 0.00 0.00 0.39 0.38 0.64 0.00 0.44 0.61 0.00 8.60 0.00 0.00 5.09 1.65 6.23 3.53 1.62 2.10 0.84 2.53 1.37 2.37 18 E2_Ac KnownBoundary 0 0.00 0.00 0.00 2.06 0.00 5.17 0.00 9.04 1.50 0.00 33.80 0.00 0.00 22.01 20.40 35.55 13.28 14.51 8.28 6.52 15.14 10.90 16.13 19 ER2d ExonRegion 0 6.30 3.88 7.53 4.36 4.22 4.82 3.30 5.74 9.49 11.82 26.92 3.66 5.58 27.79 18.24 14.78 21.11 23.45 16.04 9.22 25.40 57.38 55.36 20 E2b_E4a KnownJunction 1 25.49 6.64 32.35 18.85 17.06 2.16 30.74 25.22 38.69 40.62 73.65 12.30 31.49 59.57 65.15 29.14 86.68 59.98 58.17 32.15 67.21 187.74 153.40 21 E3_Aa NovelBoundary 0 0.00 0.00 1.15 0.00 0.00 0.00 2.25 1.56 0.00 2.20 1.95 0.00 0.00 0.00 0.00 16.06 0.00 0.00 3.67 5.75 0.00 0.00 7.00 22 ER3a ExonRegion 0 0.24 0.39 2.19 0.00 0.00 1.03 3.25 1.94 4.40 3.65 5.02 2.08 0.39 3.20 1.87 5.11 3.04 4.06 6.77 2.39 5.12 9.57 17.32 23 E3_Ab KnownBoundary 0 0.00 3.09 5.03 0.00 0.00 0.00 0.00 2.22 8.36 5.08 9.63 0.00 0.00 2.47 0.00 4.19 3.93 6.09 0.00 4.79 7.97 19.35 14.85 24 ER3b ExonRegion 0 0.00 0.34 2.83 0.00 0.00 1.57 3.74 1.96 7.56 3.28 5.44 1.76 1.91 3.98 2.65 7.81 1.92 3.98 0.35 7.20 5.16 11.93 33.63 25 E3_Da KnownBoundary 0 0.00 0.00 5.09 0.00 0.00 7.84 6.18 3.82 9.58 1.67 6.74 0.00 6.49 2.35 6.30 8.03 4.21 4.93 3.86 11.63 8.77 3.06 11.18 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3c ExonRegion 0 3.60 1.10 2.89 0.22 1.42 1.26 3.13 2.57 3.05 2.02 6.24 1.15 1.67 7.76 5.89 10.40 6.14 4.39 3.36 4.10 13.19 23.39 38.76 28 E3b_E4a KnownJunction 1 0.00 0.00 6.39 0.00 0.00 0.00 4.33 7.89 2.86 1.67 29.53 0.00 7.47 2.24 4.45 0.00 35.34 2.57 0.00 2.75 38.92 28.78 20.40 29 I3 Intron 0 6.44 3.45 6.02 2.57 6.97 2.03 6.80 6.41 7.42 3.21 5.53 11.47 5.47 7.21 3.91 8.27 3.52 3.47 3.46 4.92 6.00 37.72 29.23 30 I3_AR1 ActiveIntronRegion 0 3.61 1.71 5.28 1.79 3.96 2.96 5.54 8.22 8.71 4.55 6.95 4.70 3.52 9.09 4.58 13.60 6.31 8.46 4.24 7.18 12.62 38.84 41.18 31 I3_SR1 SilentIntronRegion 0 12.07 7.92 10.70 5.32 15.82 6.10 15.79 16.47 16.91 5.48 6.71 21.85 11.24 15.53 8.42 22.08 7.91 8.24 5.38 10.91 10.36 79.59 71.45 32 I3_AR2 ActiveIntronRegion 0 4.78 5.02 10.21 2.82 7.81 2.08 10.78 7.01 12.80 4.18 8.82 20.81 8.34 12.55 6.72 9.01 4.49 4.27 5.31 8.12 5.12 52.47 31.29 33 I3_SR2 SilentIntronRegion 0 7.28 3.26 4.82 2.51 6.97 1.29 5.40 4.64 4.74 2.28 4.14 10.61 4.91 4.45 2.56 4.87 1.88 1.05 2.56 2.76 3.46 29.71 20.40 34 E4_Aa NovelBoundary 0 23.34 0.00 8.13 0.00 11.80 0.00 1.90 0.00 13.51 1.56 4.79 0.00 0.00 4.94 0.00 0.00 4.77 2.57 13.74 0.00 12.23 11.14 24.24 35 ER4a ExonRegion 1 16.50 8.20 62.08 16.50 14.36 15.58 16.23 34.73 41.20 35.00 88.06 19.40 23.19 92.93 101.34 80.06 53.73 76.44 35.94 51.30 82.16 241.04 234.28 36 E4_Da KnownBoundary 1 47.56 5.99 62.53 7.92 31.83 18.57 24.73 40.01 40.54 36.08 90.71 49.22 14.61 92.94 82.08 85.19 38.80 102.64 17.69 69.80 123.93 224.05 263.69 37 ER4b ExonRegion 0 51.53 47.24 58.40 32.93 64.62 40.26 58.95 51.62 57.75 62.61 109.09 76.12 58.33 116.90 86.03 82.98 65.47 56.93 33.07 58.45 92.88 435.51 265.08 38 E4_Db KnownBoundary 1 111.35 107.55 53.58 38.69 157.22 112.55 118.67 49.54 57.73 100.46 75.07 244.43 184.57 94.94 57.23 51.52 36.93 13.56 38.68 29.79 31.63 514.24 160.40 39 ER4c ExonRegion 1 93.38 54.98 46.10 33.55 103.22 40.80 71.92 54.59 37.91 66.58 61.28 184.24 90.90 55.17 53.51 37.83 28.33 13.24 31.27 28.14 20.45 431.67 112.38 40 ER4d ExonRegion 0 8.47 1.02 0.00 0.00 6.69 0.00 0.66 0.00 0.00 0.00 2.90 15.15 0.00 0.00 0.00 0.00 0.00 0.92 0.00 4.26 2.20 7.29 7.34 41 ER4e ExonRegion 0 2.12 0.00 0.00 0.00 5.35 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 2.20 4.17 5.87 42 IG38_SR1 SilentIntergenicRegion 0 5.58 0.00 0.00 0.00 4.71 0.00 1.16 0.00 0.00 0.00 3.40 12.09 0.00 2.18 5.40 0.00 0.00 0.00 0.00 1.87 1.94 18.32 20.66 43 IG38_AR1 ActiveIntergenicRegion 0 21.71 28.63 16.22 10.61 31.89 7.95 13.30 11.65 6.57 14.30 4.19 21.99 8.80 6.53 8.56 4.91 3.75 4.62 6.91 12.62 1.82 73.96 17.69 44 IG38_SR2 SilentIntergenicRegion 0 7.05 6.80 2.66 3.29 10.13 1.03 7.09 2.37 2.99 2.88 2.61 6.38 3.75 2.15 0.46 2.32 1.49 1.27 2.47 3.49 1.49 13.35 11.44 45 IG38_AR2 ActiveIntergenicRegion 0 6.26 6.32 4.51 2.92 7.74 1.10 6.67 4.90 2.96 3.29 1.16 4.18 0.39 1.00 1.11 0.32 0.33 0.82 0.99 2.06 0.75 21.02 9.92