Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MED4 Gene 0 143.24 234.26 123.11 121.67 223.44 114.23 186.16 165.51 98.29 165.26 199.24 352.86 137.19 163.14 180.16 155.95 139.22 74.97 84.40 129.82 53.52 131.14 72.35 2 378586 Transcript 1 102.72 62.25 7.30 13.79 110.83 27.38 49.71 22.45 14.19 17.84 131.43 9.45 7.55 35.81 31.36 73.52 95.77 12.08 13.88 11.60 43.49 32.79 12.59 3 258648 Transcript 1 24.88 60.94 66.52 58.27 111.41 27.49 85.47 87.98 41.94 97.76 32.19 157.94 58.08 37.90 43.85 22.51 19.68 7.23 21.62 58.06 1.39 42.22 9.00 4 487937 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 417167 Transcript 0 3.55 6.13 2.83 2.39 8.53 1.64 4.55 3.89 2.89 4.17 7.93 20.20 7.26 7.18 6.60 10.20 7.08 3.65 0.02 4.14 5.40 2.41 6.59 6 378594 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 495013 Transcript 0 22.09 15.37 1.66 15.35 11.24 9.41 14.36 17.28 12.51 11.01 24.12 18.64 13.26 14.47 32.45 18.78 23.53 9.82 22.47 16.69 13.78 13.31 9.32 8 ER1a ExonRegion 0 3.25 1.23 0.70 0.15 2.48 3.14 0.95 0.99 0.00 0.12 3.38 0.00 0.00 0.58 0.41 3.40 5.66 1.65 0.00 1.22 0.24 0.00 0.00 9 ER1b ExonRegion 0 10.58 5.08 1.23 1.36 6.69 7.34 3.31 1.73 0.00 1.15 11.60 0.00 0.00 4.87 2.90 10.40 9.90 3.70 0.00 2.13 4.41 0.00 0.00 10 ER1c ExonRegion 1 269.36 367.00 44.83 34.07 486.59 323.88 372.15 44.43 31.06 65.64 386.18 27.12 184.57 157.11 162.64 453.16 301.26 44.40 203.02 147.75 200.80 120.23 236.66 11 E1_Ad KnownBoundary 1 294.72 408.48 5.85 10.52 563.92 411.81 459.42 24.60 21.33 26.49 358.09 6.00 21.59 63.28 134.37 406.05 286.30 145.13 249.98 196.10 191.63 116.65 257.46 12 E1_Da KnownBoundary 1 268.27 432.75 127.46 92.13 467.06 398.35 419.28 117.10 71.32 165.36 357.20 20.26 209.73 149.51 118.92 712.72 276.86 139.99 316.81 144.84 220.92 169.68 401.80 13 E1a_E3a KnownJunction 1 202.18 123.27 13.90 27.44 219.19 51.62 98.48 43.91 28.39 35.57 259.49 18.91 15.10 71.05 62.30 143.64 185.88 22.51 27.77 21.99 86.74 65.58 25.18 14 ER1d ExonRegion 1 431.24 607.02 62.49 46.34 738.84 551.51 607.86 59.42 45.70 92.33 619.01 51.95 416.83 355.28 341.99 753.06 488.95 75.76 338.05 233.24 341.02 227.10 402.32 15 ER1e ExonRegion 1 89.23 187.74 40.59 22.38 146.66 137.36 149.46 34.94 29.19 55.58 151.50 42.27 108.36 89.97 96.86 161.56 143.28 24.00 81.98 68.41 103.93 62.39 95.69 16 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1b_E3a KnownJunction 1 63.20 153.33 82.73 58.17 76.40 86.43 46.42 75.12 65.28 120.34 283.28 37.06 56.17 54.33 83.19 47.08 225.90 23.34 25.88 104.57 165.38 13.72 15.79 18 ER2a ExonRegion 0 7.10 12.25 5.66 4.79 17.07 3.29 9.09 7.78 3.99 5.58 15.86 40.39 14.53 14.36 13.20 20.41 14.17 7.30 0.04 8.28 10.80 4.83 13.18 19 E2_Ab KnownBoundary 0 16.67 37.23 11.92 14.72 21.22 13.74 26.76 21.03 10.10 9.54 27.38 17.86 19.64 17.54 0.00 33.75 21.88 13.51 0.00 15.21 21.56 8.39 14.34 20 ER2b ExonRegion 0 5.58 16.86 9.21 9.12 9.13 6.70 20.52 9.33 6.39 5.73 13.83 14.26 9.95 6.75 3.65 12.61 12.58 7.52 0.00 13.24 10.26 2.91 9.32 21 E2a_E3a KnownJunction 0 3.48 0.00 1.57 0.00 12.73 0.00 6.27 0.00 3.59 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 2.94 0.00 2.88 0.00 22 I2_AR1 ActiveIntronRegion 0 10.28 10.64 7.42 8.24 21.11 7.67 18.12 10.42 10.69 13.75 12.53 33.00 28.69 13.99 9.62 20.44 18.08 6.21 9.38 13.02 6.06 8.22 13.47 23 ER3a ExonRegion 1 137.32 196.47 137.37 136.65 171.45 79.51 103.21 166.09 114.40 214.68 555.46 155.02 126.77 191.21 186.29 231.12 474.64 172.97 165.78 228.14 257.83 128.15 112.51 24 E3a_E4a KnownJunction 0 168.25 281.27 216.17 229.77 172.41 51.05 116.10 269.57 170.60 257.69 314.45 229.12 154.05 451.06 383.09 553.02 306.78 394.26 424.48 287.63 116.39 330.91 293.14 25 ER4a ExonRegion 1 137.45 262.71 205.11 243.07 423.97 323.04 343.70 266.87 191.57 266.15 443.49 460.28 437.01 440.51 369.84 774.77 314.73 312.47 318.21 243.98 107.94 255.02 384.23 26 E4_Da KnownBoundary 1 270.34 506.55 182.78 220.05 502.12 423.45 541.92 254.62 173.41 241.17 344.30 1014.63 193.17 246.40 337.23 332.82 221.41 73.25 138.45 298.62 33.30 239.85 109.52 27 E4a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4b ExonRegion 0 250.23 520.48 172.11 206.64 410.75 279.26 353.15 244.79 147.68 228.30 391.07 691.90 213.44 279.56 333.81 283.59 268.37 110.80 153.80 255.80 84.20 234.34 108.38 29 E4b_E5a KnownJunction 0 339.69 590.03 177.99 214.56 492.61 236.97 342.57 250.43 126.76 247.86 432.90 588.04 268.81 390.37 323.63 285.22 272.18 110.06 150.40 207.79 130.84 184.86 112.00 30 ER5a ExonRegion 0 385.28 552.96 178.16 180.61 494.04 232.77 380.89 233.49 142.25 283.34 378.18 606.80 197.95 337.62 294.93 240.23 261.06 153.52 128.46 208.36 112.58 230.19 111.29 31 E5a_E6a KnownJunction 0 484.90 611.21 191.36 206.43 591.51 247.87 397.60 266.57 185.65 278.26 480.60 717.53 158.27 401.97 405.46 288.64 274.24 187.54 177.98 263.53 106.20 320.07 130.52 32 ER6a ExonRegion 0 414.47 440.02 206.86 247.98 389.43 186.35 277.47 299.72 173.33 285.94 536.43 907.20 279.25 453.95 424.12 432.36 342.34 266.25 262.44 296.92 166.72 323.98 156.08 33 E6a_E7a KnownJunction 1 447.41 411.64 222.38 244.96 265.11 169.56 229.07 265.22 169.21 317.35 404.37 1000.23 160.22 485.79 444.78 444.16 297.80 287.81 219.96 266.53 194.41 254.43 156.04 34 E7_Ab NovelBoundary 0 152.10 172.54 116.38 115.67 122.67 75.35 127.14 125.48 93.08 176.35 169.78 377.97 64.77 216.26 53.65 136.63 165.50 135.06 70.40 117.48 106.26 79.11 64.02 35 ER7a ExonRegion 1 309.62 336.70 190.11 215.82 215.40 149.72 187.06 232.72 151.04 284.02 370.98 878.57 131.66 444.20 308.78 351.14 287.89 262.12 180.20 224.16 182.75 204.93 130.89 36 ER7b ExonRegion 0 200.44 255.87 151.86 144.88 257.76 147.95 242.04 201.25 143.68 212.31 297.06 417.87 95.67 305.46 220.35 224.09 205.19 198.01 138.32 159.16 116.39 157.02 102.04 37 E7a_E8a KnownJunction 0 285.24 307.38 215.57 217.89 436.42 175.64 359.09 311.96 226.39 304.21 500.02 407.38 235.86 531.29 454.91 348.63 350.72 321.93 290.36 278.87 177.36 284.98 204.53 38 E7a_E9a NovelJunction 0 0.00 0.00 4.82 3.33 3.74 2.44 2.12 1.85 5.84 6.26 13.74 11.55 0.00 19.48 17.80 0.00 4.58 7.71 3.95 0.00 14.95 26.21 4.52 39 ER8a ExonRegion 0 226.12 262.84 183.33 172.76 297.12 209.64 324.39 228.18 166.39 240.77 258.10 400.52 199.78 282.98 304.65 234.61 194.80 152.43 116.50 175.21 64.05 182.79 90.68 40 E8_Da KnownBoundary 0 242.27 286.59 129.65 90.40 164.35 153.43 224.35 187.91 123.38 195.42 276.23 327.86 138.14 148.39 210.40 130.05 220.01 34.41 82.17 147.97 48.31 159.76 36.11 41 E8_Db KnownBoundary 0 223.74 318.23 149.05 102.35 292.44 80.18 270.72 215.15 112.38 175.54 252.12 451.80 219.47 250.28 312.01 168.93 191.40 73.00 73.60 179.67 52.76 157.25 71.28 42 E8b_E9a KnownJunction 0 13.04 5.66 0.00 14.92 4.33 0.00 0.00 19.67 7.06 4.65 22.74 0.00 6.49 9.42 32.51 8.20 9.54 2.57 15.34 0.00 8.65 11.51 0.00 43 ER8b ExonRegion 0 250.81 348.87 204.57 140.30 250.03 140.49 273.91 289.71 171.68 266.97 363.28 509.19 241.80 254.81 277.88 184.27 277.09 73.29 98.75 202.84 74.19 211.25 69.66 44 ER8c ExonRegion 0 344.05 529.02 227.64 219.28 390.28 177.32 323.73 351.29 182.33 297.18 350.87 730.75 241.31 288.61 340.61 172.69 220.21 72.40 98.06 189.42 40.83 242.75 73.98 45 E8_Dc KnownBoundary 0 364.88 557.60 231.96 161.32 475.55 245.54 479.39 328.06 159.81 268.27 336.93 764.20 257.45 231.39 392.24 157.39 152.88 50.41 89.98 177.95 60.48 259.87 89.12 46 ER8d ExonRegion 0 241.71 455.68 237.87 212.34 460.17 236.93 402.38 338.60 184.43 280.17 332.46 851.35 296.60 249.04 320.70 161.21 190.20 58.87 84.73 183.79 45.62 229.48 74.47 47 E8_Dd KnownBoundary 1 212.56 436.57 260.81 260.54 524.62 242.81 374.59 315.41 191.52 251.05 302.50 1013.13 400.46 270.18 406.70 151.41 204.21 44.02 97.41 197.63 33.48 184.93 70.42 48 ER8e ExonRegion 0 190.40 402.83 199.16 193.27 291.02 110.53 225.15 262.91 145.51 244.77 213.95 601.19 156.67 158.69 268.11 90.25 129.48 37.81 53.09 175.34 26.08 204.65 47.73 49 E8_De KnownBoundary 1 21.04 129.98 58.75 89.10 301.61 49.18 175.46 107.37 37.30 121.71 42.91 177.36 19.97 51.27 51.30 30.42 9.44 8.08 16.75 102.27 3.03 31.96 16.99 50 ER8f ExonRegion 1 24.88 60.94 66.52 58.27 111.41 27.49 85.47 87.98 41.94 97.76 32.19 157.94 58.08 37.90 43.85 22.51 19.68 7.23 21.62 58.06 1.39 42.22 9.00 51 E9_Aa NovelBoundary 0 180.48 253.24 606.93 819.04 607.22 76.32 754.21 566.45 116.17 464.79 67.65 55.07 41.23 44.74 32.63 115.27 66.85 991.07 713.90 748.98 63.51 46.29 88.52 52 ER9a ExonRegion 0 31.15 25.09 3.31 15.78 18.16 18.82 28.71 14.89 17.96 17.37 25.49 37.27 20.04 19.53 32.39 29.35 37.52 17.07 29.59 33.39 18.91 15.10 18.65 53 IG49 Intergenic 0 5.70 7.17 4.12 7.63 10.60 3.49 15.00 6.56 10.19 8.67 3.84 23.06 8.42 10.13 7.16 8.37 7.61 8.99 5.51 7.99 1.88 4.32 4.05 54 IG49_SR1 SilentIntergenicRegion 0 5.70 7.17 4.12 7.63 10.61 3.49 15.00 6.57 10.19 8.67 3.84 23.07 8.42 10.14 7.16 8.37 7.61 8.99 5.52 7.99 1.88 4.32 4.05