Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SUCLA2 Gene 0 69.59 128.08 102.70 131.34 134.94 111.11 126.96 101.64 106.15 123.41 134.68 262.99 97.43 128.70 135.74 93.73 126.82 57.33 64.60 121.21 50.43 116.56 56.88 2 331052 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 378654 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 378645 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 470760 Transcript 0 7.96 6.36 5.49 0.38 6.25 0.72 10.57 2.21 4.48 4.33 5.10 10.70 1.97 1.44 4.45 2.24 4.38 1.14 0.00 5.55 0.00 3.42 1.66 6 433022 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 378642 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 497202 Transcript 0 2.85 2.32 5.26 2.65 4.96 1.29 8.80 3.96 0.97 5.57 3.60 8.40 3.40 3.15 4.85 1.00 7.14 2.11 4.29 6.22 1.27 1.62 5.09 9 434484 Transcript 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 3.26 0.00 0.00 0.00 10 467222 Transcript 0 3.25 6.15 3.22 2.80 5.68 2.25 4.97 1.47 4.30 3.08 2.51 8.32 2.88 3.75 2.42 2.84 6.37 2.29 4.08 6.21 3.96 4.31 2.32 11 493152 Transcript 0 1.94 1.86 0.00 1.70 2.23 0.00 1.21 2.16 1.03 0.96 0.00 7.58 3.13 2.03 0.00 0.00 0.00 0.00 0.00 1.77 0.00 2.78 0.00 12 481279 Transcript 0 1.29 0.25 0.44 0.49 1.62 0.66 4.82 4.04 0.89 1.45 0.23 1.75 1.98 0.31 1.97 1.08 2.00 1.67 0.39 3.10 0.00 0.25 0.36 13 484941 Transcript 0 1.67 3.74 0.46 1.59 2.73 0.96 2.44 0.65 0.95 0.45 0.00 1.87 0.00 0.35 0.76 2.34 2.60 1.68 2.51 2.24 0.00 0.00 0.00 14 ER1a ExonRegion 0 12.42 20.64 0.50 1.67 22.94 45.00 26.11 0.00 0.00 0.93 20.98 0.00 1.22 18.56 25.68 22.90 23.17 6.88 6.02 12.37 13.39 15.63 12.29 15 E1_Ab KnownBoundary 0 3.41 3.29 0.00 1.83 4.33 23.74 21.02 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 11.96 0.00 10.16 4.71 5.43 0.00 0.00 0.00 16 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 17 E1_Ad KnownBoundary 1 93.42 130.83 20.87 12.99 170.63 247.64 182.08 10.35 8.62 20.07 68.70 0.00 8.12 48.91 48.71 89.12 143.06 66.74 37.27 34.32 68.70 52.78 50.79 18 ER1b ExonRegion 1 50.80 80.33 4.90 4.09 96.33 163.21 117.83 0.00 0.00 4.59 77.32 0.00 4.69 101.10 106.62 77.28 104.80 25.87 19.11 42.55 68.31 72.92 38.18 19 E1_Ae KnownBoundary 0 3.48 34.93 18.04 35.23 34.63 22.15 80.07 6.28 15.31 30.11 9.37 0.00 0.00 20.95 11.62 8.03 11.78 12.10 4.24 11.70 21.19 47.82 3.33 20 ER1c ExonRegion 1 50.80 77.28 4.90 5.45 96.33 163.21 117.83 0.00 0.00 6.12 78.60 0.00 4.69 103.40 105.41 80.25 102.33 25.87 19.11 42.55 69.78 72.92 38.18 21 ER1d ExonRegion 1 48.84 76.02 4.90 8.12 94.58 152.28 116.56 1.00 2.52 9.26 77.32 0.00 4.69 95.76 80.68 77.16 101.82 26.65 16.05 40.51 72.72 78.05 38.18 22 ER1e ExonRegion 0 13.05 26.78 6.59 10.61 17.20 29.69 28.78 7.33 13.47 14.04 13.12 5.15 1.01 22.74 16.79 18.82 18.00 26.48 11.07 12.61 23.87 21.63 28.11 23 E1_Da NovelBoundary 0 10.89 22.76 3.02 3.33 0.00 7.55 3.93 6.28 11.75 9.46 4.95 0.00 0.00 12.07 0.00 12.39 0.00 22.34 12.33 10.80 14.89 2.82 31.41 24 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E1b_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E1c_E2a KnownJunction 0 7.19 8.68 6.21 10.39 4.33 0.00 6.45 11.09 17.45 13.94 9.37 17.56 6.33 19.01 8.90 4.02 8.23 23.71 0.00 27.29 8.71 7.90 4.10 27 E1c_E4a KnownJunction 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 3.26 0.00 0.00 0.00 28 E1c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER1f ExonRegion 0 11.29 16.27 2.86 11.81 8.03 9.17 6.62 12.10 18.53 14.53 9.66 12.99 4.69 14.62 2.90 11.89 3.30 24.02 9.56 23.40 13.22 6.25 29.37 30 ER1g ExonRegion 0 10.44 11.93 3.68 12.36 6.60 5.01 5.83 11.06 18.61 12.46 11.34 8.66 5.00 17.32 6.77 12.28 5.72 24.14 7.64 25.39 14.84 7.92 23.10 31 ER2a ExonRegion 1 6.13 7.59 9.98 25.95 12.45 9.88 23.89 17.28 19.84 22.45 70.49 18.64 2.39 36.82 13.32 10.80 81.85 20.59 9.95 50.85 50.37 15.22 9.71 32 E2_Ab KnownBoundary 1 0.00 0.00 6.42 12.79 16.13 16.24 24.51 6.41 10.10 14.32 54.70 11.85 0.00 12.66 0.00 15.04 69.28 9.58 12.42 35.22 31.07 9.98 7.09 33 E2_Ac KnownBoundary 1 19.41 23.35 15.70 40.72 16.21 7.55 29.94 29.04 21.01 26.78 67.54 24.61 0.00 11.77 0.00 0.00 59.37 24.25 12.33 47.55 41.21 8.70 15.37 34 ER2b ExonRegion 1 19.75 17.62 23.28 58.60 24.08 18.34 43.69 31.69 32.52 47.41 135.95 63.50 10.94 43.31 20.31 17.83 159.54 40.03 22.30 78.01 99.90 27.09 23.49 35 ER2c ExonRegion 1 23.22 57.22 55.42 82.99 88.71 85.75 53.02 66.36 75.91 102.53 159.47 165.83 45.56 149.39 103.68 189.64 146.19 158.18 84.18 146.46 84.32 111.01 114.80 36 E2a_E3a KnownJunction 0 6.45 0.00 3.19 3.06 3.48 0.00 1.77 4.35 0.00 5.80 2.68 13.20 0.00 0.00 0.00 0.00 4.77 4.15 7.15 6.20 0.00 3.12 0.00 37 E2a_E4a KnownJunction 1 56.82 123.86 65.08 107.38 529.80 392.67 154.00 94.31 79.14 120.66 238.11 272.49 62.98 173.00 114.35 67.42 195.79 112.67 56.19 170.98 81.55 79.05 83.74 38 ER3a ExonRegion 0 2.12 4.40 5.58 4.89 11.39 3.86 18.19 3.65 2.92 6.15 5.84 4.33 10.20 4.64 4.79 3.00 11.88 0.44 1.77 5.94 0.66 1.74 7.51 39 E3a_E4a KnownJunction 0 0.00 2.57 7.01 0.00 0.00 0.00 6.45 3.86 0.00 4.75 2.26 7.65 0.00 4.83 9.77 0.00 4.77 1.74 3.95 6.52 3.15 0.00 7.77 40 ER4a ExonRegion 0 43.16 121.81 78.02 127.38 196.88 258.55 204.67 101.86 121.18 165.06 250.19 280.33 101.59 151.55 104.24 115.20 225.81 81.82 67.72 177.66 103.09 125.28 88.33 41 E4a_E5a KnownJunction 0 93.28 181.55 106.86 135.68 111.21 88.30 137.21 108.56 148.38 204.07 255.54 439.04 116.06 182.83 142.53 123.39 252.17 73.17 66.07 208.18 104.34 146.78 115.15 42 ER5a ExonRegion 0 91.85 172.36 106.83 170.65 145.59 117.68 157.89 142.83 178.02 212.26 301.46 527.61 224.86 256.14 187.67 162.88 304.94 83.95 95.78 229.67 83.25 189.72 90.50 43 E5_Da KnownBoundary 0 32.89 12.89 11.83 0.00 12.48 0.00 18.99 8.30 4.43 11.58 11.48 0.00 6.82 2.47 10.75 0.00 18.14 1.74 0.00 6.33 0.00 5.57 0.00 44 E5a_E6a KnownJunction 0 116.39 203.65 108.87 160.12 261.12 174.16 252.61 154.52 168.40 192.82 285.12 532.37 215.73 260.99 179.62 155.17 232.44 67.65 104.00 268.64 49.67 221.67 157.15 45 ER5b ExonRegion 0 7.96 6.36 5.49 0.38 6.25 0.72 10.57 2.21 4.48 4.33 5.10 10.70 1.97 1.44 4.45 2.24 4.38 1.14 0.00 5.55 0.00 3.42 1.66 46 ER6a ExonRegion 0 71.73 252.87 98.19 185.89 228.91 215.76 230.70 154.22 166.59 182.54 258.02 637.71 253.73 242.01 180.13 164.73 261.92 104.66 107.17 237.27 82.65 218.09 97.11 47 E6a_E7a KnownJunction 0 75.27 361.12 145.97 285.15 316.13 160.82 235.25 199.41 182.96 185.75 281.91 736.89 365.24 257.17 256.26 264.03 236.00 126.47 160.00 266.15 98.53 326.07 136.32 48 ER7a ExonRegion 0 87.94 242.26 136.61 216.36 226.45 156.74 211.35 174.20 210.13 193.33 322.59 710.81 244.81 273.53 195.62 195.12 297.86 117.16 159.60 251.04 105.22 228.28 115.80 49 E7_Da KnownBoundary 0 90.09 217.46 130.86 178.10 272.07 271.04 208.40 153.78 182.64 190.18 303.92 687.22 211.67 262.11 167.75 177.39 237.68 108.23 141.27 250.36 76.42 188.05 78.53 50 ER7b ExonRegion 0 97.23 208.53 136.13 223.35 263.44 247.79 224.75 165.88 186.35 204.77 271.60 596.15 204.09 256.81 188.05 181.03 257.07 146.08 133.30 208.12 76.53 250.78 96.91 51 E7b_E8a KnownJunction 0 171.44 280.54 163.48 296.30 334.72 277.68 333.30 195.55 207.00 231.42 245.48 594.04 233.10 292.90 292.60 233.61 287.70 165.32 152.95 221.54 83.15 340.46 136.32 52 ER8a ExonRegion 0 121.17 243.01 146.74 239.87 278.28 252.15 278.03 160.31 201.32 220.21 298.15 563.91 263.81 277.32 230.65 225.14 290.48 171.38 161.66 209.57 74.93 327.63 142.43 53 ER8b ExonRegion 0 134.56 311.84 156.13 194.97 322.92 282.19 346.46 161.55 192.09 202.60 277.51 649.38 253.17 299.92 235.95 236.86 294.24 140.03 162.39 242.38 127.66 237.25 153.81 54 E8_Da KnownBoundary 0 118.69 284.29 161.56 199.21 272.33 137.59 283.35 122.93 175.43 203.02 314.61 594.04 141.06 290.37 202.49 226.35 236.18 123.70 171.86 254.77 140.67 197.29 130.52 55 ER8c ExonRegion 0 107.05 264.12 126.39 164.55 242.69 164.46 244.07 119.20 145.59 177.83 297.73 575.06 132.31 298.47 189.60 208.26 248.26 150.19 158.26 178.35 135.04 160.07 122.72 56 E8_Db KnownBoundary 0 3.78 3.16 1.83 1.63 12.65 0.00 8.70 2.42 3.04 2.53 0.00 5.55 0.00 2.35 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 57 E8b_E8c KnownJunction 0 146.47 372.17 124.03 173.30 232.51 173.42 192.20 128.23 128.85 156.42 251.48 640.11 143.33 242.98 207.55 210.88 232.07 156.98 140.52 156.53 107.93 181.86 109.35 58 ER8d ExonRegion 0 3.25 6.15 3.22 2.80 5.68 2.25 4.97 1.47 4.30 3.08 2.51 8.32 2.88 3.75 2.42 2.84 6.37 2.29 4.08 6.21 3.96 4.31 2.32 59 E8_Ac KnownBoundary 0 0.00 2.70 0.00 1.73 3.14 2.90 0.00 0.00 3.18 3.73 2.47 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 60 ER8e ExonRegion 0 104.68 210.31 133.96 154.89 147.03 172.35 175.74 128.84 159.02 183.41 256.51 382.11 118.74 269.56 233.19 199.65 223.01 96.48 114.93 195.22 135.47 160.67 113.54 61 E8_Dc NovelBoundary 0 28.45 65.38 43.76 88.70 31.15 77.34 119.50 51.67 78.15 81.04 75.91 170.46 42.85 79.76 54.02 69.73 72.46 37.43 49.60 56.63 39.60 90.20 31.50 62 E8d_E9a KnownJunction 0 203.00 210.42 152.57 206.73 179.80 160.76 274.43 144.91 192.59 212.37 236.74 410.38 109.73 264.82 223.13 204.56 253.58 95.76 134.40 197.38 110.03 211.68 105.34 63 ER8f ExonRegion 0 151.68 183.02 126.62 183.99 156.98 138.76 235.67 129.63 165.51 207.97 219.71 461.81 118.81 288.01 227.26 188.23 233.26 78.22 110.43 185.81 111.65 200.71 91.04 64 ER9a ExonRegion 0 183.79 208.51 159.95 190.14 209.77 189.31 236.13 138.72 176.51 207.83 258.74 362.37 111.25 268.92 214.69 164.37 286.33 94.79 152.38 209.10 122.49 171.28 124.16 65 E9_Ab KnownBoundary 0 274.64 292.51 193.52 201.01 306.88 285.40 281.18 161.01 178.33 222.79 310.71 388.03 129.70 304.85 243.28 162.27 334.92 112.05 191.63 247.10 145.73 164.29 164.75 66 ER9b ExonRegion 0 184.95 222.23 189.34 233.94 236.46 214.91 267.39 154.70 186.68 217.19 248.40 406.14 101.44 276.91 251.18 188.43 272.75 115.03 126.19 222.34 123.66 142.29 104.89 67 E9a_E10a KnownJunction 0 270.57 316.33 167.44 314.08 286.25 296.76 350.70 161.75 228.59 240.66 242.17 320.95 142.85 267.53 267.88 288.56 339.13 153.38 122.36 243.91 144.19 174.94 138.89 68 ER10a ExonRegion 0 156.65 240.51 187.89 269.84 242.14 237.03 238.61 167.47 208.21 238.56 288.20 349.28 90.01 275.37 291.30 218.70 315.74 139.31 165.42 258.12 126.58 202.99 114.89 69 E10a_E12a KnownJunction 0 145.58 253.05 249.70 275.92 334.13 256.10 272.44 173.87 219.76 263.54 260.38 318.55 101.29 217.32 316.21 204.39 338.01 117.02 160.29 216.42 153.15 174.27 110.37 70 ER11a ExonRegion 0 2.58 0.50 0.89 0.99 3.25 1.32 9.65 8.08 1.79 2.91 0.47 3.50 3.95 0.61 3.94 2.17 4.01 3.34 0.77 6.20 0.00 0.50 0.71 71 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER12a ExonRegion 0 142.70 233.41 223.15 306.44 315.27 210.43 246.40 178.32 215.68 254.30 278.75 422.66 113.06 247.15 281.63 202.07 252.34 136.78 170.59 236.02 123.23 176.44 116.50 73 E12_Da KnownBoundary 0 117.50 197.79 140.27 259.37 272.07 171.27 236.54 137.68 160.36 201.44 192.15 295.00 91.55 166.34 250.57 180.81 179.52 112.79 166.22 218.98 51.95 132.39 96.46 74 E12_Db KnownBoundary 1 126.02 228.97 171.22 216.42 223.77 203.69 232.60 138.26 151.71 188.76 160.88 219.52 13.31 193.13 215.47 205.33 133.80 78.35 115.58 200.76 50.90 205.68 105.59 75 E12b_E14a KnownJunction 0 3.41 9.67 2.63 5.06 0.00 2.90 14.09 3.57 6.19 13.89 22.06 6.75 0.00 19.95 10.88 7.86 12.62 1.82 3.67 9.40 3.15 0.00 0.00 76 ER12b ExonRegion 0 131.89 264.87 230.14 338.68 296.51 238.16 288.71 210.01 232.43 295.26 259.61 379.10 76.51 289.19 333.28 257.65 227.56 153.36 198.29 273.67 74.65 212.78 128.29 77 ER12c ExonRegion 0 123.46 199.20 230.69 255.23 227.55 152.02 179.49 203.79 172.15 210.36 123.99 367.63 158.08 131.76 247.86 81.80 95.13 41.08 63.63 148.08 26.60 199.71 52.03 78 ER12d ExonRegion 0 0.00 2.03 3.68 0.00 0.00 0.00 0.00 0.00 0.00 1.15 0.00 4.33 4.69 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79 E13_Aa NovelBoundary 0 25.04 37.62 6.53 23.77 34.30 5.79 17.40 7.02 12.41 10.26 0.00 12.00 13.31 9.77 5.56 0.00 0.00 10.11 27.39 31.13 3.15 3.12 16.48 80 ER13a ExonRegion 0 3.34 7.48 0.92 3.19 5.46 1.93 4.87 1.30 1.91 0.90 0.00 3.75 0.00 0.70 1.53 4.69 5.21 3.35 5.02 4.47 0.00 0.00 0.00 81 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82 ER14a ExonRegion 0 5.71 20.53 7.36 22.88 12.71 20.23 25.75 15.67 21.72 13.50 12.01 12.52 10.85 8.06 11.79 7.07 12.61 6.86 10.76 17.91 1.36 7.19 4.91 83 E14_Da KnownBoundary 0 25.49 48.02 11.86 32.96 3.57 13.57 35.29 34.21 31.45 23.40 13.74 0.00 13.64 7.36 4.45 3.59 3.93 4.68 8.75 22.63 2.59 8.70 0.00 84 ER14b ExonRegion 0 23.42 29.72 12.04 23.40 15.45 14.70 21.29 23.07 22.99 12.65 6.20 15.35 10.37 9.55 11.61 6.09 3.94 10.17 7.60 21.35 1.59 11.73 6.14 85 ER14c ExonRegion 0 1.94 1.86 0.00 1.70 2.23 0.00 1.21 2.16 1.03 0.96 0.00 7.58 3.13 2.03 0.00 0.00 0.00 0.00 0.00 1.77 0.00 2.78 0.00