Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C13orf34	Gene	0	42.11	36.95	23.26	26.56	40.27	25.07	49.62	28.32	12.18	29.71	93.76	205.31	74.52	133.00	78.90	87.44	107.00	20.95	15.09	32.94	5.34	14.35	9.64
2	377815	Transcript	0	0.00	1.11	0.00	0.00	0.00	0.00	0.54	0.00	0.00	0.00	0.51	0.00	0.00	0.34	0.00	0.00	0.19	0.40	0.00	0.58	0.00	0.00	1.16
3	447732	Transcript	0	0.00	0.45	0.14	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	2.89	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00
4	377814	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	471712	Transcript	1	3.70	0.00	3.34	1.53	0.00	0.00	0.00	0.00	0.00	1.29	14.00	24.76	0.00	2.12	4.45	31.10	0.00	6.43	13.65	3.26	2.53	3.00	0.00
6	390667	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	464754	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.00	0.79	0.00	0.00	0.00	0.00	1.09	0.00	0.00	0.00	1.03	0.00	0.00	0.68	0.00	0.00	0.37	0.80	0.00	1.17	0.00	0.00	2.32
9	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	4.06	0.00	0.00	0.00	4.84	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	3.13	0.00	0.00	0.00
10	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00
11	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Af	KnownBoundary	0	6.30	8.02	0.00	2.80	0.00	12.04	20.18	1.60	0.00	0.00	23.80	0.00	0.00	14.13	9.15	54.77	4.11	12.81	0.00	2.62	0.00	0.00	7.00
14	ER1b	ExonRegion	1	1.67	8.24	0.00	0.72	0.00	3.57	12.19	0.36	0.00	0.00	13.94	0.00	5.92	8.12	2.44	23.15	4.86	9.92	0.00	2.58	0.00	0.00	2.16
15	ER1c	ExonRegion	1	4.23	14.24	0.00	1.36	1.34	9.17	31.78	1.73	0.00	0.00	29.96	0.00	18.76	17.87	8.70	56.47	11.55	14.78	0.00	4.26	0.00	0.00	5.87
16	ER1d	ExonRegion	1	4.23	14.24	0.00	1.36	2.68	9.17	31.78	1.73	0.00	0.00	30.93	0.00	18.76	17.87	8.70	56.47	13.20	14.78	0.00	4.26	0.00	0.00	5.87
17	ER1e	ExonRegion	1	4.23	14.24	0.00	1.36	2.68	9.17	32.44	1.73	0.00	0.00	30.93	0.00	18.76	18.68	10.15	56.47	13.20	14.78	0.00	4.26	0.00	0.00	5.87
18	ER1f	ExonRegion	1	18.46	20.90	11.73	1.05	7.32	28.11	48.25	2.47	2.83	8.23	53.31	13.26	7.90	165.25	42.01	130.47	90.54	11.25	12.70	25.94	4.85	8.36	15.76
19	E1a_E2a	KnownJunction	0	0.00	9.21	11.24	0.00	3.99	15.28	23.14	2.51	2.98	10.61	32.69	7.35	0.00	52.92	14.96	19.91	44.97	1.82	18.64	7.99	3.15	7.78	3.76
20	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	3.04	5.17	10.50	5.45	2.66	7.62	18.23	7.41	4.60	11.89	109.22	135.73	58.23	129.77	42.74	123.08	94.98	14.66	13.25	19.72	5.21	12.25	6.49
22	E2a_E3a	KnownJunction	0	3.26	0.00	5.80	4.10	19.86	2.78	18.50	4.97	1.50	14.77	46.96	110.44	38.63	125.91	48.95	83.57	33.01	12.73	4.80	11.44	0.00	5.69	0.00
23	E2a_E4a	KnownJunction	1	3.70	0.00	3.34	1.53	0.00	0.00	0.00	0.00	0.00	1.29	14.00	24.76	0.00	2.12	4.45	31.10	0.00	6.43	13.65	3.26	2.53	3.00	0.00
24	E2a_E5a	NovelJunction	0	0.00	6.71	0.00	0.00	0.00	0.00	0.00	2.05	0.00	1.21	7.69	42.91	20.45	14.54	0.00	27.69	4.49	10.86	0.00	3.26	0.00	3.12	4.35
25	I2	Intron	0	2.33	1.70	1.59	2.39	3.86	1.04	10.75	3.32	0.35	2.14	2.86	18.58	18.16	11.41	3.60	6.76	11.01	3.04	1.21	7.10	0.00	1.03	0.00
26	I2_AR2	ActiveIntronRegion	0	3.83	2.06	1.64	2.88	4.71	0.31	12.31	3.68	0.31	1.63	3.00	21.25	19.33	12.97	3.79	4.79	10.03	1.82	0.00	9.67	0.00	1.41	0.00
27	I2_SR2	SilentIntronRegion	0	1.16	1.77	2.17	2.75	4.78	0.96	7.59	4.60	0.48	3.02	3.83	16.63	23.68	13.27	4.89	8.90	16.63	4.50	1.94	8.15	0.00	1.45	0.00
28	E3_Aa	NovelBoundary	0	6.00	0.00	1.36	1.43	4.33	0.00	25.13	0.00	0.00	4.73	2.63	50.42	14.77	9.36	17.80	16.24	12.90	1.82	3.76	15.53	0.00	0.00	0.00
29	ER3a	ExonRegion	0	11.29	17.75	5.30	2.24	35.18	22.14	56.79	6.27	5.11	14.48	73.09	232.66	72.50	102.50	39.61	49.97	69.20	8.34	1.19	22.63	0.00	8.00	1.40
30	E3_Da	NovelBoundary	0	3.63	6.25	0.00	8.82	3.57	2.84	14.97	0.00	1.79	2.26	7.37	18.16	6.82	22.07	4.45	4.36	22.16	0.00	8.75	34.96	0.00	3.12	0.00
31	E3a_E4a	KnownJunction	1	0.00	32.89	7.04	0.00	11.97	5.68	11.08	8.87	6.08	3.20	52.07	200.47	65.90	105.36	25.47	38.37	77.89	8.21	4.42	14.32	0.00	0.00	0.00
32	E3a_E5a	KnownJunction	0	3.56	15.92	0.00	0.00	8.23	7.21	2.03	0.00	0.00	4.30	4.74	48.62	0.00	28.78	17.92	3.33	4.77	0.00	0.00	5.82	0.00	0.00	0.00
33	I3	Intron	0	2.75	4.51	1.00	4.62	5.03	3.28	14.47	2.76	1.87	4.60	7.60	40.53	21.87	15.83	4.40	12.24	11.24	3.62	0.90	13.33	0.58	1.57	1.27
34	I3_SR1	SilentIntronRegion	0	2.75	4.52	1.00	4.63	5.04	3.28	14.48	2.76	1.87	4.60	7.61	40.56	21.89	15.85	4.40	12.25	11.25	3.62	0.90	13.34	0.58	1.57	1.27
35	E4_Aa	NovelBoundary	1	10.15	5.66	3.08	4.03	15.96	9.48	11.66	4.31	0.00	5.72	8.05	11.70	40.26	19.60	0.00	0.00	8.51	4.06	0.00	5.88	0.00	0.00	0.00
36	ER4a	ExonRegion	0	20.80	23.52	10.52	2.67	11.52	3.83	12.95	6.88	5.53	12.49	76.39	306.17	80.65	135.54	50.20	70.23	97.74	17.07	18.14	11.61	2.44	9.24	2.94
37	E4_Da	NovelBoundary	0	7.56	18.48	0.00	5.06	3.90	10.79	27.51	9.65	5.38	8.84	18.11	42.01	19.80	26.49	8.90	7.52	16.64	2.11	0.00	24.61	3.15	6.12	0.00
38	E4a_E5a	KnownJunction	0	59.94	19.47	11.24	5.16	28.35	2.90	23.72	4.85	4.75	13.00	112.19	309.55	78.89	156.22	94.81	79.38	154.37	15.55	22.40	14.06	2.53	20.64	0.00
39	I4	Intron	0	5.28	6.56	1.17	3.65	9.28	3.96	12.85	3.52	1.79	4.21	7.47	35.49	24.87	16.65	6.37	10.67	9.34	3.64	1.07	12.30	0.20	1.59	1.34
40	I4_SR1	SilentIntronRegion	0	5.29	6.57	1.17	3.65	9.29	3.97	12.87	3.53	1.80	4.22	7.48	35.55	24.92	16.68	6.38	10.69	9.36	3.64	1.07	12.32	0.20	1.59	1.34
41	E5_Aa	NovelBoundary	0	3.41	18.42	15.88	15.22	15.45	2.90	33.30	21.28	4.20	6.47	7.26	56.72	6.82	12.42	0.00	15.47	0.00	2.11	0.00	11.70	0.00	7.78	0.00
42	ER5a	ExonRegion	0	25.14	32.02	23.13	4.90	34.10	35.85	51.20	11.36	11.48	30.30	127.95	420.06	88.88	163.20	70.80	88.48	164.56	14.40	18.53	20.47	3.84	8.33	0.18
43	E5_Da	NovelBoundary	0	6.52	0.00	0.00	7.92	3.23	16.92	7.82	16.72	5.03	4.35	4.79	76.52	0.00	5.18	0.00	3.25	8.23	0.00	0.00	2.68	3.15	5.20	0.00
44	E5a_E7a	KnownJunction	1	21.26	43.15	22.29	6.69	31.07	37.48	50.30	13.76	8.22	26.06	90.02	412.48	46.59	127.73	81.22	95.10	161.57	10.61	3.67	14.38	6.12	8.57	0.00
45	I5	Intron	0	2.06	6.73	0.71	5.93	7.29	8.92	10.31	4.51	2.87	3.33	3.01	39.11	21.75	6.01	0.40	5.79	5.14	1.08	0.62	3.31	0.86	2.84	0.00
46	I5_SR1	SilentIntronRegion	0	2.07	6.76	0.71	5.95	7.32	8.96	10.35	4.52	2.88	3.34	3.02	39.26	21.83	6.03	0.40	5.81	5.16	1.08	0.62	3.32	0.86	2.85	0.00
47	ER6a	ExonRegion	0	0.00	0.45	0.14	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	2.89	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00
48	E7_Aa	NovelBoundary	0	12.97	14.73	1.83	8.82	4.07	2.90	25.44	10.93	4.60	8.65	9.84	33.16	6.17	12.13	0.00	7.09	17.11	3.81	0.00	2.94	0.00	2.33	0.00
49	ER7a	ExonRegion	1	39.80	55.52	24.14	9.89	24.53	11.25	46.94	25.64	11.70	21.67	114.66	491.59	126.92	191.57	85.32	102.45	164.69	25.45	13.22	35.78	3.51	10.95	7.92
50	E7a_E8a	KnownJunction	0	50.16	65.98	28.71	13.22	14.18	12.10	42.22	38.24	20.28	28.39	161.41	511.97	147.88	249.75	97.16	150.56	210.85	33.99	25.88	43.34	8.90	16.90	17.07
51	E8_Aa	NovelBoundary	0	10.00	18.29	0.00	8.92	0.00	4.66	28.04	14.13	3.59	11.04	2.68	6.30	12.66	9.36	4.45	3.67	4.39	6.34	8.56	26.91	0.00	2.88	0.00
52	ER8a	ExonRegion	1	28.93	47.09	24.34	14.11	23.80	25.29	48.41	28.23	13.09	27.77	187.29	508.75	108.04	263.85	73.55	138.18	141.76	31.67	29.17	34.57	5.61	18.06	9.53
53	E8a_E9a	KnownJunction	0	30.45	78.67	20.76	12.69	30.90	39.75	64.08	19.51	6.37	26.41	188.73	522.77	135.38	223.03	69.47	176.71	135.20	22.09	18.45	44.68	2.59	8.21	7.43
54	I8_AR1	ActiveIntronRegion	0	2.72	2.18	1.34	2.41	13.26	6.05	9.73	6.18	1.05	3.67	3.92	26.23	17.84	7.67	5.43	9.00	9.45	0.64	1.48	0.50	0.51	3.04	1.37
55	ER9a	ExonRegion	0	43.08	70.74	23.32	19.08	46.60	29.93	67.52	39.67	9.54	32.15	172.15	482.04	114.80	244.29	82.48	143.35	185.92	37.89	11.66	42.29	6.00	8.88	10.48
56	E9_Da	KnownBoundary	0	51.27	62.09	29.15	27.10	39.90	32.99	95.83	45.59	9.17	36.26	121.40	497.26	131.81	199.37	81.59	123.81	138.20	35.86	13.93	47.36	8.71	6.18	8.54
57	ER9b	ExonRegion	0	28.65	50.50	31.95	22.63	44.40	31.76	71.86	29.59	10.44	32.19	144.95	309.30	125.50	260.61	96.16	157.95	161.74	59.13	24.96	47.04	7.85	15.82	18.59
58	E9_Db	KnownBoundary	1	38.15	48.22	31.99	16.55	76.91	49.23	97.86	18.98	12.36	33.55	189.15	343.16	52.43	292.01	69.84	65.28	201.12	24.83	18.17	47.11	14.15	7.35	15.96
59	ER9c	ExonRegion	1	46.81	55.00	25.65	26.62	60.86	39.70	70.11	30.31	14.88	40.01	167.76	406.27	96.42	278.93	60.05	150.61	245.80	45.16	24.37	54.87	9.28	12.11	14.96
60	E9_Dc	NovelBoundary	1	71.49	63.34	17.06	34.33	63.58	38.05	100.12	37.30	12.27	37.55	124.87	436.19	136.52	314.09	69.72	229.17	237.12	37.06	31.25	67.30	11.12	15.06	23.65
61	E9d_E10a	KnownJunction	1	30.15	36.11	20.14	26.60	46.26	10.05	50.48	29.16	11.75	27.05	113.66	286.44	55.68	256.58	56.25	103.82	122.95	32.29	16.38	37.90	7.72	6.18	7.77
62	ER9d	ExonRegion	0	34.92	41.98	18.51	28.96	47.59	21.02	70.31	35.99	13.41	35.10	115.42	382.38	99.66	287.35	86.52	162.19	191.10	43.62	13.31	44.76	8.81	11.61	10.91
63	I9	Intron	0	3.43	4.46	1.39	2.32	4.34	3.15	6.31	5.65	1.58	3.91	10.13	24.81	20.01	13.34	7.21	8.78	7.24	0.97	1.82	5.07	0.84	0.99	2.24
64	I9_SR1	SilentIntronRegion	0	3.61	4.70	1.47	2.45	4.55	3.25	6.59	5.92	1.63	4.12	10.43	25.35	20.27	13.48	7.46	9.25	7.54	0.94	1.92	5.29	0.88	1.05	2.36
65	I9_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.43	1.39	1.06	0.48	0.69	0.00	4.87	15.76	16.51	11.50	2.55	0.00	1.72	1.55	0.00	1.02	0.00	0.00	0.00
66	ER10a	ExonRegion	0	64.13	80.99	31.28	25.42	59.79	24.74	71.87	30.75	14.11	36.73	118.23	241.21	105.93	201.64	83.05	137.16	136.55	44.80	18.82	42.27	5.37	14.13	16.01
67	E10a_E11a	KnownJunction	0	74.16	109.72	22.53	23.41	25.38	20.61	62.62	33.11	9.03	30.57	143.62	183.81	99.34	199.54	75.16	95.62	108.56	16.08	17.51	43.85	2.47	11.39	4.35
68	E11_Aa	NovelBoundary	0	10.30	3.03	2.31	26.24	23.01	10.28	18.90	7.35	6.74	8.86	7.90	17.86	5.84	4.59	6.30	14.53	8.13	3.15	4.71	7.48	0.00	0.00	3.24
69	ER11a	ExonRegion	0	73.43	49.71	33.48	50.54	60.80	31.02	73.86	46.58	16.24	45.26	149.44	248.37	113.60	213.31	141.87	129.07	172.66	32.48	18.90	57.24	6.44	19.51	12.53
70	E11_Da	NovelBoundary	0	3.78	8.95	5.26	28.83	27.50	0.00	20.80	9.57	9.69	13.38	4.90	19.51	6.82	4.77	17.80	19.91	17.48	2.11	0.00	14.19	0.00	10.29	0.00
71	E11a_E12a	KnownJunction	0	59.57	41.57	46.07	36.29	46.60	33.11	60.33	45.72	14.24	53.35	184.94	204.67	78.57	189.65	176.90	135.26	178.77	31.42	11.58	50.69	5.19	15.06	12.12
72	I11	Intron	0	10.98	14.81	8.84	23.71	27.31	10.89	18.75	18.47	13.18	17.33	9.90	37.69	20.72	11.52	7.63	9.33	10.63	5.69	6.00	15.54	4.15	17.36	7.23
73	I11_AR2	ActiveIntronRegion	0	3.70	6.64	2.75	12.25	10.99	3.14	9.08	10.68	4.43	6.68	3.89	28.66	16.68	7.99	4.60	5.14	7.92	1.43	4.17	7.97	1.11	7.45	2.07
74	I11_AR4	ActiveIntronRegion	0	14.62	20.25	12.57	31.63	36.80	15.50	24.42	24.20	18.16	23.38	13.01	42.78	24.37	13.67	9.94	11.60	12.54	8.22	7.60	20.32	6.05	23.93	9.81
75	E12_Aa	NovelBoundary	0	12.59	19.08	18.01	72.88	58.32	24.08	48.45	45.30	24.45	59.26	11.69	43.21	33.11	9.06	21.39	7.78	16.18	4.64	12.71	21.35	5.68	55.05	4.10
76	ER12a	ExonRegion	0	111.26	76.21	61.15	74.71	93.53	75.42	101.60	69.41	39.38	75.93	164.53	333.83	128.98	186.85	217.46	155.59	207.56	33.32	40.49	51.24	9.28	43.22	11.84
77	E12_Da	NovelBoundary	0	6.89	9.80	20.22	85.10	79.88	10.11	40.19	45.96	31.92	58.18	9.42	30.76	6.66	4.41	10.75	0.00	8.79	0.00	7.81	27.93	0.00	34.05	0.00
78	E12a_E13a	KnownJunction	0	180.48	68.61	58.31	50.81	84.89	58.60	118.18	38.81	24.88	43.73	166.78	261.09	128.08	215.08	353.30	157.99	226.83	56.87	32.85	53.05	3.03	21.80	3.41
79	I12	Intron	0	25.09	29.39	14.73	40.18	48.05	24.44	28.98	38.31	22.60	26.38	7.19	29.57	19.88	11.31	11.36	14.39	13.20	4.91	10.06	17.76	4.48	26.46	11.54
80	I12_SR1	SilentIntronRegion	0	0.00	0.00	1.23	7.20	10.70	0.00	9.46	5.68	4.59	6.88	0.28	11.13	4.02	6.03	2.07	0.00	2.83	1.58	0.00	5.47	2.20	8.04	2.94
81	I12_AR1	ActiveIntronRegion	0	2.12	0.79	2.52	16.81	24.23	2.45	15.89	12.48	15.44	15.04	4.62	32.47	16.15	9.29	2.90	5.61	3.85	5.24	3.36	13.59	3.31	27.66	7.34
82	I12_AR2	ActiveIntronRegion	0	4.23	12.64	10.24	38.70	44.82	8.84	20.66	22.96	24.26	27.98	10.91	50.25	28.81	15.37	5.28	20.27	13.32	5.54	13.88	23.48	3.94	47.10	8.71
83	I12_AR3	ActiveIntronRegion	0	23.82	29.46	21.46	50.13	60.99	24.60	25.81	44.95	29.74	33.45	7.37	44.32	22.99	11.75	14.39	13.35	12.79	6.23	13.51	18.33	2.64	32.26	14.83
84	I12_SR3	SilentIntronRegion	0	37.57	40.21	15.18	43.35	51.70	23.07	31.23	48.03	21.92	29.18	5.21	18.65	10.60	10.77	14.26	10.02	12.61	3.72	6.44	16.73	2.97	20.60	10.56
85	I12_AR6	ActiveIntronRegion	0	19.75	24.64	7.38	27.78	31.62	34.79	37.47	24.82	15.45	15.41	10.22	20.30	29.17	12.09	6.00	24.03	17.45	4.87	10.90	19.85	10.28	24.62	10.05
86	E13_Aa	NovelBoundary	0	7.48	19.86	16.41	54.27	59.42	23.79	36.39	44.07	29.43	21.46	9.90	30.46	12.17	7.30	8.90	11.62	31.60	17.49	14.02	28.25	9.20	17.70	10.93
87	ER13a	ExonRegion	0	31.76	25.58	18.22	22.22	33.91	20.05	32.02	23.84	10.48	23.20	38.70	106.22	40.40	42.00	44.67	33.07	41.55	8.10	10.48	20.56	5.16	11.65	8.57
88	ER13b	ExonRegion	0	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00