Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ENOX1 Gene 0 10.80 81.81 35.48 13.17 63.47 25.68 38.31 108.43 96.02 67.06 0.75 3.71 0.50 0.40 0.30 1.11 0.97 37.05 32.14 65.30 56.23 71.36 42.13 2 261488 Transcript 0 0.48 6.36 3.79 0.65 4.38 4.75 4.58 14.68 14.58 11.42 0.00 0.00 0.00 0.27 0.00 1.08 1.11 12.63 10.67 13.07 13.31 14.04 10.45 3 412891 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.92 0.00 4 482207 Transcript 0 0.00 3.37 5.81 0.00 6.88 0.00 3.77 3.91 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 1.52 2.26 0.04 1.26 5 ER1a ExonRegion 0 0.84 8.71 2.35 0.52 2.76 4.08 7.59 11.33 9.17 10.02 0.00 0.00 0.00 0.00 0.00 0.22 0.00 9.95 11.44 14.88 27.47 10.78 18.65 6 E1a_E2a KnownJunction 0 0.00 0.00 11.00 1.76 0.00 9.60 3.89 28.75 37.30 29.44 0.00 0.00 0.00 0.00 0.00 4.27 0.00 36.93 17.32 29.91 19.21 31.60 11.61 7 I1_SR2 SilentIntronRegion 0 0.26 20.95 3.79 7.42 10.61 0.56 10.52 21.31 25.07 9.02 0.33 0.00 0.00 0.00 0.00 0.00 0.00 9.26 5.64 30.53 2.25 1.46 5.25 8 I1_AR2 ActiveIntronRegion 0 0.26 9.38 2.66 6.04 9.41 1.64 10.37 25.60 23.25 5.62 0.00 0.80 0.00 0.00 0.00 0.00 0.00 2.49 3.33 20.04 0.90 3.36 1.57 9 I1_AR3 ActiveIntronRegion 0 1.75 34.12 5.51 2.36 22.88 2.73 17.68 24.80 24.06 12.99 0.00 0.00 0.64 0.00 0.00 0.00 0.00 9.35 10.31 24.63 2.49 0.00 2.86 10 I1_SR4 SilentIntronRegion 0 0.00 36.30 2.23 2.40 32.51 2.89 14.40 35.88 27.17 16.44 0.00 1.97 0.00 0.00 0.00 0.00 0.00 6.10 4.34 18.50 0.60 0.00 0.53 11 I1_AR4 ActiveIntronRegion 0 0.68 31.43 6.15 4.28 28.03 2.94 18.71 35.42 21.65 12.12 0.00 0.63 0.00 0.00 0.62 0.00 0.00 15.57 5.35 19.84 4.28 0.00 2.95 12 I1_SR5 SilentIntronRegion 0 1.88 31.34 6.20 5.66 25.78 1.33 13.42 24.28 14.38 7.25 0.00 0.16 0.12 0.00 0.00 0.00 0.00 6.84 3.63 15.27 1.89 0.31 2.84 13 I1_AR6 ActiveIntronRegion 0 0.00 17.36 4.38 2.52 4.41 0.00 7.70 5.33 6.66 3.16 0.00 1.29 0.00 0.00 0.00 0.00 0.00 2.04 1.15 16.38 0.73 1.01 2.30 14 I1_AR7 ActiveIntronRegion 0 0.42 17.98 1.35 1.39 12.60 2.17 10.85 14.66 15.87 6.03 0.00 0.00 0.00 0.00 0.00 1.17 0.00 3.66 1.31 14.55 0.16 0.20 3.24 15 ER2a ExonRegion 0 1.05 13.31 2.43 0.71 9.07 9.79 8.69 14.26 16.49 11.39 0.00 0.00 0.00 0.00 0.00 0.92 0.80 14.06 10.17 19.83 17.09 19.74 14.34 16 E2a_E4a KnownJunction 0 0.00 2.63 1.27 0.00 0.00 0.00 0.00 4.07 4.63 2.71 0.00 0.00 0.00 0.00 0.00 0.00 4.77 1.91 14.40 0.00 2.78 0.00 4.35 17 I2_SR2 SilentIntronRegion 0 1.05 9.54 1.54 1.28 9.49 1.00 9.81 21.82 10.00 5.03 0.03 0.50 0.32 0.00 0.00 0.00 0.05 1.91 2.21 12.96 1.77 0.52 2.56 18 I2_AR2 ActiveIntronRegion 0 1.69 14.24 1.84 1.36 18.73 3.67 14.43 67.93 21.86 9.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.78 0.00 17.45 2.20 0.00 18.21 19 I2_AR3 ActiveIntronRegion 0 3.17 13.23 2.60 1.35 12.39 1.91 8.16 46.83 16.42 6.37 0.00 0.99 0.00 0.00 0.00 0.41 0.00 11.19 1.32 12.18 3.39 0.58 6.78 20 I2_SR3 SilentIntronRegion 0 2.65 8.35 4.31 0.00 6.30 0.00 11.72 56.71 17.24 6.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.36 0.00 17.42 4.09 0.00 4.04 21 I2_AR4 ActiveIntronRegion 0 2.39 9.23 2.46 0.94 11.58 0.23 10.27 66.67 22.28 9.27 0.00 0.00 0.00 0.00 0.00 0.38 0.00 10.86 8.67 20.67 4.58 0.53 5.33 22 I2_SR4 SilentIntronRegion 0 1.74 6.35 2.33 4.47 6.74 0.00 6.62 28.40 11.93 6.34 0.00 1.76 0.00 0.00 0.00 0.98 0.00 8.85 2.99 11.61 2.18 0.00 3.26 23 I2_AR6 ActiveIntronRegion 0 4.18 28.59 6.50 2.96 12.54 2.61 16.43 24.80 15.43 11.57 0.00 0.39 0.00 0.00 0.00 0.67 0.00 1.21 0.65 13.26 1.39 1.38 6.44 24 I2_AR7 ActiveIntronRegion 0 1.50 19.47 2.23 1.66 3.47 0.90 11.03 15.74 6.64 5.64 0.00 0.73 0.00 0.00 0.00 0.00 0.00 3.83 3.25 12.58 1.75 0.78 4.79 25 I2_AR8 ActiveIntronRegion 0 0.00 16.89 1.68 1.84 7.57 1.01 10.62 16.56 10.70 5.85 0.00 0.92 0.00 0.00 0.00 0.00 0.81 3.41 2.63 14.17 3.90 1.46 1.68 26 I2_SR8 SilentIntronRegion 0 1.80 21.91 1.70 1.87 6.06 0.73 7.84 12.14 8.83 4.32 0.00 1.71 0.00 0.00 0.00 0.04 0.00 2.45 3.79 14.15 1.93 0.28 2.35 27 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 0.00 28 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 29 ER4a ExonRegion 0 8.29 47.41 20.68 6.29 32.67 9.28 30.80 96.47 93.47 76.13 1.85 11.64 0.00 0.00 0.00 0.00 1.77 29.18 48.44 65.81 58.51 73.79 46.80 30 E4a_E5a KnownJunction 0 0.00 60.91 28.50 6.83 23.60 21.01 39.61 148.85 149.39 118.09 2.42 0.00 0.00 0.00 0.00 0.00 0.00 28.40 43.39 107.00 82.72 118.24 34.15 31 I4_AR1 ActiveIntronRegion 0 1.94 4.60 5.63 1.21 22.49 0.00 4.38 50.12 20.32 2.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.28 1.46 1.51 0.00 0.48 0.34 32 ER5a ExonRegion 0 1.46 43.69 24.10 9.97 38.19 35.82 31.14 117.37 125.84 92.73 3.57 7.13 3.35 0.47 0.00 0.00 1.17 78.57 50.32 83.73 85.79 95.61 65.54 33 E5a_E6a KnownJunction 0 2.82 28.28 37.70 12.35 35.48 18.40 33.34 145.11 141.43 102.67 0.00 6.30 6.82 0.00 0.00 0.00 0.00 122.74 83.48 71.78 106.94 135.14 108.58 34 ER6a ExonRegion 0 2.99 54.73 34.95 13.94 31.00 13.06 22.09 129.75 142.32 104.84 1.48 5.71 2.21 0.00 0.21 0.00 1.22 68.26 62.60 102.61 121.59 113.54 68.97 35 E6a_E7a KnownJunction 0 12.67 96.82 36.16 19.54 38.12 20.16 23.80 139.49 145.72 100.28 0.00 11.85 0.00 0.00 0.00 0.00 0.00 125.73 47.62 63.98 77.35 61.78 51.05 36 ER7a ExonRegion 0 13.44 92.69 38.32 18.55 43.66 35.57 40.73 120.01 145.77 106.86 0.00 2.76 5.44 0.00 0.86 1.72 2.29 93.77 88.72 99.88 127.92 136.66 77.62 37 E7_Ab KnownBoundary 0 3.33 117.02 36.52 10.62 66.55 49.46 30.91 124.54 141.03 95.95 0.00 12.45 13.64 0.00 0.00 0.00 4.02 23.55 97.32 151.48 70.49 160.80 121.47 38 ER7b ExonRegion 0 6.28 40.88 36.16 11.09 34.60 21.66 24.15 109.72 101.05 64.77 0.83 0.25 1.31 0.00 0.00 2.73 2.38 29.84 48.52 93.37 56.45 67.13 52.65 39 E7a_E8a KnownJunction 0 9.78 42.95 40.71 15.62 51.78 23.40 46.72 134.93 122.08 76.91 2.37 0.00 0.00 0.00 0.00 4.36 4.77 53.77 65.88 87.63 94.95 120.94 83.49 40 ER8a ExonRegion 0 6.08 60.17 30.98 13.76 63.88 22.51 32.32 104.61 101.42 73.03 1.08 9.24 0.00 0.89 0.66 3.53 2.73 33.40 45.03 81.19 63.99 81.44 43.24 41 E8_Da KnownBoundary 0 0.00 9.01 8.99 0.00 0.00 0.00 2.21 6.08 7.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 3.07 3.15 0.00 0.00 42 E8a_E9a KnownJunction 0 6.67 83.67 36.04 15.08 106.54 17.60 35.46 73.03 84.92 76.45 0.00 12.60 0.00 2.47 4.45 7.86 4.02 36.19 15.25 69.35 63.51 70.54 49.00 43 ER8b ExonRegion 0 0.00 3.37 5.81 0.00 6.88 0.00 3.77 3.91 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 1.52 2.26 0.04 1.26 44 ER9a ExonRegion 0 7.05 64.20 21.03 8.03 43.38 23.20 23.62 69.60 59.35 49.32 0.42 3.20 0.00 0.37 0.76 1.70 0.59 41.18 14.87 54.44 57.60 59.58 40.39 45 E9a_E10a KnownJunction 0 6.82 128.86 16.44 8.06 45.84 27.31 50.26 97.26 64.41 54.91 0.00 0.00 0.00 0.00 0.00 0.00 4.77 54.88 15.81 63.15 71.17 75.75 39.86 46 ER10a ExonRegion 0 7.69 95.83 32.86 11.93 48.93 26.67 37.98 101.70 83.21 60.90 0.68 2.56 0.00 0.00 0.49 0.00 0.33 45.40 25.38 66.37 54.34 74.23 35.90 47 E10a_E11a KnownJunction 0 16.23 107.22 60.08 24.17 51.70 25.72 28.66 122.77 96.12 78.06 2.68 0.00 0.00 0.00 0.00 0.00 0.00 45.89 39.34 74.91 77.10 131.22 62.32 48 E10a_E12a NovelJunction 0 0.00 5.53 0.00 0.00 3.74 5.62 1.68 15.98 7.70 9.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.67 0.00 20.39 2.66 0.00 0.00 49 E11_Aa NovelBoundary 0 0.00 6.71 1.63 2.06 0.00 0.00 1.81 4.19 1.79 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.84 3.26 3.03 0.00 3.67 50 ER11a ExonRegion 0 10.56 84.50 49.19 15.88 49.61 30.01 30.98 104.56 88.94 71.00 0.51 3.92 0.00 0.64 0.00 0.61 0.00 35.33 23.49 67.71 74.14 75.12 41.63 51 E11a_E12a KnownJunction 0 13.56 156.68 38.14 10.75 21.22 20.27 43.99 79.40 76.97 83.41 0.00 0.00 0.00 0.00 0.00 4.36 0.00 37.76 52.52 72.74 93.90 79.36 39.95 52 ER12a ExonRegion 0 14.80 165.25 45.41 16.87 60.68 25.33 49.44 111.28 92.20 72.11 0.00 2.94 0.00 0.58 0.00 3.75 0.76 40.27 34.55 91.87 82.70 71.09 54.40 53 E12a_E13a KnownJunction 0 13.93 140.76 46.69 16.12 87.61 46.05 61.25 104.57 88.43 81.45 0.00 0.00 0.00 0.00 0.00 4.19 4.77 34.95 31.06 71.84 63.69 63.62 61.12 54 ER13a ExonRegion 0 17.41 99.10 55.34 18.41 71.31 28.35 35.07 119.95 111.71 79.00 0.53 2.95 0.00 1.87 0.36 2.99 1.34 54.19 49.64 82.43 83.09 76.21 54.69 55 E13a_E14a KnownJunction 0 17.19 140.57 61.56 16.08 89.98 34.53 49.42 135.42 126.36 59.02 0.00 0.00 0.00 0.00 6.30 0.00 0.00 56.42 70.87 68.07 73.76 76.48 61.12 56 ER14a ExonRegion 0 20.44 126.97 46.89 19.42 92.14 29.00 75.67 149.26 131.51 75.50 0.77 3.13 0.00 0.66 0.75 1.40 1.56 37.02 43.36 91.78 87.19 101.78 46.61 57 E14a_E15a KnownJunction 0 13.34 143.66 57.69 27.34 97.45 26.63 85.59 144.46 132.84 73.98 0.00 0.00 0.00 4.83 0.00 0.00 0.00 38.51 52.71 71.97 55.41 111.81 51.47 58 ER15a ExonRegion 0 9.43 121.41 63.74 24.58 80.74 26.70 65.55 163.51 122.30 72.88 0.27 1.22 0.00 2.59 0.31 0.73 0.00 26.45 39.51 63.75 44.15 93.87 37.56 59 E15a_E16a KnownJunction 0 18.60 174.51 72.71 24.51 81.49 27.48 61.25 192.19 131.31 82.28 0.00 6.30 0.00 0.00 0.00 3.85 3.74 35.57 30.78 90.70 58.01 106.12 46.18 60 ER16a ExonRegion 0 22.25 128.91 59.90 24.88 104.61 44.88 54.69 179.16 144.48 96.27 0.00 4.83 1.91 0.00 1.27 1.07 0.00 31.59 39.96 86.80 54.09 100.88 51.32 61 E16a_E17a KnownJunction 0 26.52 116.76 72.44 33.13 113.24 57.64 60.77 210.26 163.97 99.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.02 28.71 86.16 59.80 139.43 59.92 62 I16_AR1 ActiveIntronRegion 0 1.11 19.20 2.83 1.78 22.87 0.81 9.36 21.33 19.88 5.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.70 4.20 8.86 2.02 6.98 2.75 63 I16_SR2 SilentIntronRegion 0 1.29 28.15 0.77 0.67 31.22 2.80 0.44 10.78 4.60 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.27 1.87 4.26 2.20 5.96 2.65 64 I16_AR2 ActiveIntronRegion 0 1.76 34.91 1.43 1.36 34.67 1.83 2.76 20.38 8.44 6.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 3.05 4.61 6.34 9.98 3.67 65 I16_AR3 ActiveIntronRegion 0 0.00 13.53 4.58 1.36 15.94 0.00 4.61 21.94 6.28 6.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.53 3.19 4.53 4.02 3.26 5.87 66 I16_AR5 ActiveIntronRegion 0 0.82 5.05 3.56 2.99 0.00 0.00 4.66 27.32 7.65 5.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.24 1.23 16.06 2.99 8.00 3.79 67 I16_AR6 ActiveIntronRegion 0 2.12 9.88 3.68 3.89 8.03 0.00 2.65 24.69 6.18 9.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.18 0.00 13.68 2.20 9.23 5.03 68 ER17a ExonRegion 0 30.69 111.49 67.18 24.15 123.40 38.96 72.37 189.23 137.23 90.91 0.29 1.56 0.00 0.00 0.00 0.00 0.00 57.11 41.08 78.20 56.35 99.31 59.93 69 E17a_E18a KnownJunction 0 41.71 169.84 93.17 26.07 151.10 40.03 121.31 193.62 147.71 80.59 2.32 0.00 0.00 0.00 0.00 0.00 0.00 38.76 60.24 83.73 56.22 93.32 45.75 70 I17_AR4 ActiveIntronRegion 0 3.19 24.29 3.91 2.90 18.90 2.40 5.83 20.04 15.34 6.72 0.08 0.28 0.00 0.00 0.00 0.00 0.00 6.02 3.29 8.11 3.67 9.26 2.56 71 E18_Aa NovelBoundary 0 10.22 23.29 1.18 3.53 23.09 0.00 8.70 38.08 21.93 11.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 8.28 8.12 0.00 7.59 4.01 72 ER18a ExonRegion 0 21.09 147.69 58.04 21.21 143.64 45.87 71.28 180.15 148.54 94.64 1.02 4.22 0.00 0.25 0.22 0.82 1.22 32.53 24.36 72.49 36.15 87.44 43.23 73 E18_Da KnownBoundary 0 2.89 33.28 6.59 1.33 57.98 0.00 17.89 50.40 19.56 12.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 2.36 0.00 36.01 18.01 74 ER18b ExonRegion 0 0.51 7.16 1.89 0.27 10.06 0.29 2.73 15.00 5.29 3.56 0.00 0.00 0.00 1.36 0.00 0.00 0.00 0.30 0.00 0.72 0.00 8.08 3.29