Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MRPS31	Gene	0	117.62	115.86	87.25	90.97	120.40	175.89	89.02	74.34	62.55	84.50	132.17	408.15	143.97	197.66	265.30	108.41	115.27	45.72	51.56	65.39	40.07	47.58	35.63
2	323563	Transcript	0	130.91	132.78	113.44	94.07	136.41	235.41	108.85	94.41	81.58	104.97	221.40	411.02	232.89	337.86	411.81	180.06	217.93	71.43	82.26	99.33	69.74	78.04	67.39
3	435009	Transcript	0	0.00	0.53	0.48	0.00	0.70	0.48	0.87	0.00	1.42	0.22	0.76	3.00	0.51	0.85	0.69	3.15	0.86	0.99	1.25	0.56	1.65	0.00	0.00
4	461675	Transcript	0	36.26	19.89	4.59	13.72	36.84	28.58	12.51	9.56	14.96	13.41	12.86	65.44	33.73	37.30	47.44	28.83	20.85	6.61	4.26	13.87	8.69	5.12	8.33
5	498078	Transcript	1	77.04	50.35	19.15	42.06	58.59	44.68	33.28	26.31	13.75	27.75	7.81	95.34	41.82	20.82	35.37	6.47	5.95	2.56	4.85	8.70	2.41	9.39	5.41
6	ER1a	ExonRegion	0	55.82	79.66	42.95	23.88	69.07	171.98	79.47	24.47	35.72	33.95	104.14	65.90	30.75	138.86	147.60	84.13	121.85	34.15	35.98	62.67	59.50	25.28	30.16
7	E1a_E3a	KnownJunction	0	35.56	35.91	85.07	58.60	11.54	16.58	25.92	50.73	66.78	61.49	184.68	82.98	63.79	305.79	321.90	175.77	191.68	70.97	108.99	92.04	64.93	100.67	102.01
8	ER2a	ExonRegion	0	0.00	1.06	0.96	0.00	1.40	0.96	1.73	0.00	1.55	0.45	1.52	5.99	1.01	1.70	1.38	1.95	1.73	0.00	2.50	1.11	0.40	0.00	0.00
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	4.36	0.00	1.99	0.00	0.00	2.90	0.00	0.00
10	ER3a	ExonRegion	0	134.73	179.11	120.83	103.46	164.97	322.35	148.93	99.15	88.07	117.95	236.40	582.12	191.87	309.90	363.67	211.38	194.62	107.90	116.17	122.68	59.94	72.32	68.11
11	E3a_E4a	KnownJunction	0	198.92	245.61	177.31	123.03	217.83	393.18	159.82	128.64	98.73	145.24	301.71	798.26	246.41	449.23	402.87	269.59	239.55	130.33	131.58	123.87	93.04	94.48	30.39
12	ER4a	ExonRegion	0	107.64	139.12	146.51	132.29	133.79	236.04	86.99	106.87	99.09	119.91	214.99	743.55	329.91	392.16	425.52	222.74	201.61	117.59	92.68	113.50	92.30	81.34	56.05
13	E4_Da	KnownBoundary	0	114.09	133.40	178.23	124.33	127.08	185.69	76.18	99.15	110.13	131.35	224.11	630.66	346.57	503.39	575.07	312.31	277.42	145.46	118.40	129.69	150.49	81.20	60.10
14	ER4b	ExonRegion	0	119.00	113.32	143.32	107.77	135.17	207.05	88.39	107.96	103.91	123.97	293.44	505.10	341.85	473.07	488.38	235.18	294.02	134.06	114.85	119.94	129.81	77.82	69.28
15	E4b_E5a	KnownJunction	0	153.66	132.48	122.94	121.20	139.98	273.25	163.31	122.48	106.34	139.47	303.34	414.89	350.14	454.24	406.95	208.49	331.46	98.91	97.70	142.22	104.47	92.34	75.20
16	ER5a	ExonRegion	0	149.30	186.32	133.92	113.47	176.47	315.02	163.86	114.23	86.94	128.38	257.50	505.07	303.06	417.12	452.70	230.81	259.72	96.67	74.12	116.28	89.49	74.95	66.44
17	E5_Da	NovelBoundary	1	6.82	14.27	1.63	21.04	17.66	73.71	37.76	15.12	32.70	25.09	31.27	135.49	114.93	55.74	18.54	35.46	45.25	17.87	3.95	34.32	5.68	14.76	14.68
18	E5a_E6a	KnownJunction	0	269.16	260.94	136.60	106.91	309.00	456.50	181.73	131.72	89.84	155.13	277.49	597.04	314.10	393.85	684.84	210.80	266.76	49.50	96.85	91.91	45.53	82.60	91.17
19	E5a_E8b	NovelJunction	0	3.48	2.57	9.34	7.66	7.05	2.16	1.81	4.85	3.59	3.68	2.53	18.46	13.64	2.30	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
20	I5	Intron	1	9.90	26.42	6.48	23.67	25.70	37.60	26.41	12.70	17.98	17.28	13.40	155.48	83.36	40.63	19.82	20.20	17.94	6.44	5.28	18.62	4.01	11.47	7.91
21	I5_AR1	ActiveIntronRegion	0	7.40	16.59	5.62	19.70	22.50	35.89	25.63	11.80	15.71	14.73	15.85	145.90	64.49	39.33	16.00	21.65	20.06	7.55	5.84	21.88	4.95	11.88	8.31
22	I5_SR1	SilentIntronRegion	1	13.08	38.81	7.59	28.79	29.84	39.98	27.56	13.90	20.93	20.58	10.43	168.31	107.41	42.52	24.71	18.52	15.42	5.11	4.64	14.69	2.86	11.04	7.47
23	E6_Aa	NovelBoundary	1	52.45	163.72	8.04	36.03	73.09	92.28	88.90	25.01	33.48	36.83	14.69	251.48	191.38	53.03	37.09	7.69	18.23	1.74	0.00	18.22	2.59	15.98	7.68
24	ER6a	ExonRegion	0	159.63	167.80	134.51	115.09	191.10	307.51	117.89	115.88	82.94	122.80	254.57	695.35	331.15	350.28	505.05	178.49	208.58	45.94	78.04	86.05	46.90	98.32	63.34
25	E6_Da	NovelBoundary	1	15.48	21.11	20.43	43.18	11.88	37.54	25.31	28.09	27.98	33.52	29.27	233.18	71.42	49.27	22.99	17.43	4.68	12.89	18.07	26.14	0.00	12.25	8.54
26	E6a_E8b	KnownJunction	0	105.13	85.77	108.19	105.61	58.91	135.38	50.26	87.82	80.18	74.60	96.08	421.79	128.24	169.70	287.04	116.81	69.38	41.25	51.58	83.54	17.30	72.32	41.49
27	I6	Intron	0	25.04	41.78	8.53	35.65	36.79	43.20	31.80	17.77	24.16	22.97	16.45	134.86	77.09	53.35	29.80	22.82	13.36	6.45	8.10	20.53	5.72	11.68	9.29
28	I6_SR1	SilentIntronRegion	0	25.45	42.50	8.67	36.25	37.31	43.88	32.32	18.08	24.55	23.36	16.63	136.88	77.85	54.08	30.23	23.16	13.54	6.52	8.24	20.83	5.77	11.81	9.37
29	E7_Aa	NovelBoundary	1	51.56	21.90	15.55	52.04	69.61	54.57	32.55	25.42	42.22	37.50	18.74	98.73	130.51	55.04	28.43	27.43	24.59	15.88	13.55	21.41	11.18	2.45	15.88
30	I6_AR1	ActiveIntronRegion	0	1.98	0.95	0.57	1.64	8.38	5.13	3.00	0.23	2.31	0.76	7.09	22.22	37.83	13.75	6.19	3.96	3.52	2.22	0.00	4.26	2.94	4.72	5.87
31	ER7a	ExonRegion	1	39.32	27.75	4.84	19.48	46.34	45.06	21.30	11.11	18.09	12.72	19.34	118.27	67.47	57.70	66.58	31.26	28.71	6.93	8.52	21.99	8.55	10.23	16.66
32	E7_Da	NovelBoundary	0	184.18	281.13	578.51	683.60	203.57	121.98	338.55	575.32	585.56	562.27	89.23	178.56	117.20	58.57	134.87	151.93	180.83	861.73	164.71	255.67	82.53	74.70	174.65
33	E7a_E8b	KnownJunction	0	33.19	12.04	4.35	7.96	27.33	12.10	3.71	8.01	11.83	14.10	6.37	12.60	0.00	16.89	28.31	26.40	13.00	6.30	0.00	5.75	8.83	0.00	0.00
34	I7	Intron	1	28.01	32.96	13.31	39.75	59.40	54.95	38.36	21.32	26.66	29.40	11.83	143.90	79.12	33.91	33.58	19.86	15.22	7.26	6.18	16.51	3.14	12.58	8.10
35	I7_SR1	SilentIntronRegion	0	30.77	33.50	13.71	36.66	69.69	63.31	41.54	24.65	33.67	35.82	14.05	129.72	71.09	41.16	26.42	28.80	17.19	8.36	7.72	18.30	4.27	14.64	6.76
36	I7_AR1	ActiveIntronRegion	0	17.35	34.66	16.87	56.55	39.34	42.71	30.14	26.47	32.57	31.12	16.09	190.39	83.14	37.67	41.61	21.65	25.34	11.73	6.22	19.66	4.30	12.74	11.46
37	I7_AR2	ActiveIntronRegion	1	22.47	27.97	4.75	14.92	75.83	88.44	55.06	12.62	9.68	16.80	2.61	71.68	69.05	16.44	15.79	7.29	0.00	0.00	4.20	4.45	0.00	13.83	5.27
38	I7_SR2	SilentIntronRegion	1	41.17	31.59	10.65	29.33	66.75	47.89	39.45	11.91	13.46	21.57	5.59	125.14	89.63	23.61	39.55	7.99	3.09	1.73	4.47	13.56	0.82	8.74	6.38
39	E8_Aa	NovelBoundary	1	81.94	58.28	36.81	104.98	101.10	98.86	97.51	33.60	36.54	50.07	19.58	181.86	148.53	36.02	58.22	12.13	17.67	0.00	0.00	14.45	2.66	11.51	11.44
40	ER8a	ExonRegion	1	137.67	94.85	35.85	78.67	115.84	85.92	66.57	52.20	26.88	53.78	14.66	182.55	80.72	37.57	62.03	12.20	9.02	3.96	8.90	15.01	4.82	18.00	10.81
41	E8_Ab	KnownBoundary	0	81.87	74.26	40.68	108.74	101.87	114.08	76.53	70.32	26.04	55.87	33.59	210.97	76.13	48.15	143.15	15.38	13.18	4.39	13.55	30.36	0.00	16.72	17.24
42	ER8b	ExonRegion	0	214.40	203.86	201.85	210.19	216.68	263.39	163.41	167.02	134.47	170.88	231.30	804.71	176.94	326.90	586.68	140.31	180.49	52.78	69.08	93.59	52.10	94.89	55.84
43	E8a_E9a	KnownJunction	1	208.19	216.67	202.92	238.46	274.02	246.28	186.90	156.16	140.83	182.31	247.75	892.49	135.87	384.43	710.31	148.94	161.57	41.62	65.88	147.33	40.59	95.46	68.38
44	E9_Aa	NovelBoundary	0	12.45	8.95	26.88	17.81	7.64	5.79	1.90	14.29	7.67	7.28	2.53	6.30	6.82	0.00	34.49	17.00	3.93	6.14	17.88	8.76	2.78	5.76	0.00
45	ER9a	ExonRegion	0	175.99	137.51	142.97	162.95	148.28	177.23	87.43	115.14	100.43	143.88	156.87	771.21	150.82	216.01	405.74	103.22	107.81	23.35	58.96	74.15	30.85	69.23	29.52
46	E9_Da	KnownBoundary	1	127.87	43.22	53.37	107.58	124.02	84.16	44.60	59.84	64.76	55.04	39.59	643.71	114.93	103.18	223.62	29.31	24.31	5.14	32.38	26.53	0.00	18.13	15.96
47	ER9b	ExonRegion	1	126.84	75.62	30.46	56.50	78.67	54.54	34.54	28.62	34.81	29.25	21.01	345.43	75.98	62.69	135.90	27.51	6.51	6.65	12.38	22.04	0.38	6.73	5.37
48	ER9c	ExonRegion	0	16.40	5.85	2.45	5.45	1.34	3.44	0.00	0.43	0.62	1.72	0.97	8.12	2.93	4.06	8.70	0.74	2.89	1.15	0.80	2.39	0.00	0.78	0.00
49	IG15_SR1	SilentIntergenicRegion	0	10.51	6.92	1.35	7.41	9.98	5.58	2.91	2.19	2.04	1.72	0.67	11.71	5.52	2.33	6.84	2.13	1.15	2.64	3.80	1.96	0.76	0.36	1.52