Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-207N4.2 Gene 0 0.72 0.70 1.88 0.70 4.58 1.26 4.98 0.88 0.00 0.00 0.66 14.64 8.12 1.83 1.40 4.07 2.26 2.21 0.00 2.91 0.00 0.00 0.00 2 441659 Transcript 0 0.36 0.35 0.94 0.35 2.30 0.63 2.50 0.44 0.00 0.00 0.33 7.39 4.72 0.93 1.05 2.04 1.14 1.12 0.00 1.47 0.00 0.00 0.00 3 IG47 Intergenic 0 1.15 0.58 2.55 2.63 2.65 2.24 4.70 3.57 1.57 1.86 4.81 54.76 24.60 8.16 3.00 17.18 5.93 6.92 1.09 5.14 0.23 0.55 0.46 4 IG47_SR1 SilentIntergenicRegion 0 2.65 0.94 7.80 5.20 5.96 4.46 6.74 7.19 2.50 4.11 8.26 84.03 36.13 13.59 5.78 25.10 8.28 15.27 1.87 8.00 0.22 0.96 0.23 5 IG47_SR2 SilentIntergenicRegion 0 2.40 1.11 5.91 4.42 4.59 3.43 7.91 4.45 1.89 1.79 7.95 67.85 27.77 14.53 4.10 23.91 6.95 10.05 2.41 7.35 0.31 1.16 0.49 6 IG47_AR2 ActiveIntergenicRegion 0 0.00 0.00 3.97 1.87 1.49 6.23 8.16 0.97 1.67 1.23 12.12 95.66 20.98 25.29 4.17 30.79 10.72 8.91 1.00 3.69 0.00 4.04 0.87 7 IG47_SR3 SilentIntergenicRegion 0 0.87 0.59 1.42 2.28 2.07 1.68 4.48 3.01 1.72 1.91 4.53 52.68 23.68 7.66 2.86 16.96 5.75 5.54 0.87 4.83 0.24 0.51 0.58 8 IG47_AR3 ActiveIntergenicRegion 0 1.20 0.00 0.36 2.87 2.53 0.00 1.25 1.03 1.94 0.00 3.87 48.56 27.51 0.79 1.88 3.13 1.70 2.35 0.00 3.68 0.00 0.00 0.00 9 IG47_AR4 ActiveIntergenicRegion 0 1.57 0.00 0.00 2.40 2.84 0.00 5.56 3.60 2.12 0.00 1.74 63.04 11.82 4.42 2.55 5.11 2.05 5.21 0.00 1.91 0.00 0.00 0.00 10 IG47_AR5 ActiveIntergenicRegion 0 2.12 0.00 0.00 5.72 8.03 0.00 8.83 5.19 1.48 0.00 0.64 56.28 20.64 1.08 0.39 7.93 0.00 3.57 0.00 0.00 0.00 0.00 0.00 11 IG47_AR6 ActiveIntergenicRegion 0 2.12 0.00 0.00 5.45 8.03 0.00 8.83 5.76 1.24 0.00 0.00 55.56 18.76 0.00 0.00 11.89 0.00 1.85 0.00 0.00 0.00 0.00 0.00 12 IG47_AR7 ActiveIntergenicRegion 0 1.24 0.22 1.35 1.51 3.01 0.60 2.63 4.26 1.00 1.11 3.20 47.00 12.36 3.95 1.38 15.65 7.07 6.02 0.35 4.87 0.00 0.00 1.28 13 IG47_SR4 SilentIntergenicRegion 0 0.32 0.17 0.63 1.16 1.11 1.79 2.37 2.50 0.59 0.75 1.75 35.38 20.63 2.64 1.38 9.48 4.29 4.00 0.57 3.25 0.18 0.00 0.20 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.26 3.94 0.10 2.09 0.00 0.07 0.07 0.00 0.04 0.00 0.00 0.00 15 E1_Da NovelBoundary 0 0.00 6.64 1.83 20.74 3.23 0.00 0.00 0.00 30.03 1.42 0.00 5.85 0.00 4.71 0.00 7.69 4.58 16.46 0.00 9.14 0.00 0.00 0.00 16 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I1 Intron 0 1.10 0.28 1.52 2.32 2.27 1.97 4.84 2.50 1.05 0.83 1.61 30.94 15.36 4.00 2.07 14.46 5.60 5.65 1.16 3.87 0.53 0.00 0.25 18 I1_SR1 SilentIntronRegion 0 1.10 0.28 1.52 2.32 2.27 1.97 4.84 2.50 1.05 0.83 1.61 30.95 15.37 4.00 2.07 14.47 5.60 5.65 1.16 3.87 0.53 0.00 0.25 19 E2_Aa NovelBoundary 0 0.00 0.00 3.67 7.06 0.00 0.00 0.00 2.26 3.50 1.13 0.00 25.06 6.82 3.00 10.51 8.63 0.00 4.02 0.00 0.00 0.00 0.00 0.00 20 ER2a ExonRegion 0 1.09 1.05 2.82 1.05 6.89 1.89 7.50 1.33 0.00 0.00 1.00 21.91 10.23 2.71 1.05 6.12 3.37 3.28 0.00 4.36 0.00 0.00 0.00 21 IG48 Intergenic 0 0.76 1.21 1.53 2.20 2.50 3.20 3.07 3.24 3.63 1.95 1.25 26.40 11.43 3.10 1.22 7.06 2.77 4.53 0.66 3.28 0.20 0.13 0.37 22 IG48_SR1 SilentIntergenicRegion 0 1.55 0.52 2.82 3.70 2.86 3.27 4.02 3.12 1.51 1.64 1.87 28.53 13.64 4.23 2.32 12.37 3.93 9.87 0.71 3.27 0.28 0.10 0.21 23 IG48_AR1 ActiveIntergenicRegion 0 0.94 0.00 0.81 3.53 1.99 2.45 2.20 3.46 0.38 0.44 1.53 12.69 2.87 4.73 3.85 16.36 6.05 15.64 0.00 2.47 0.00 0.00 0.63 24 IG48_SR2 SilentIntergenicRegion 0 0.55 0.88 1.00 1.41 2.06 2.70 2.69 2.81 3.35 1.65 1.05 25.46 11.40 2.81 0.80 5.70 2.36 3.03 0.68 2.95 0.16 0.12 0.41 25 IG48_AR2 ActiveIntergenicRegion 0 0.32 12.34 5.31 4.37 1.65 4.31 2.82 4.02 9.94 6.37 0.29 34.31 7.10 1.75 0.97 1.40 0.58 0.12 0.08 4.33 0.00 1.25 0.00 26 IG48_SR3 SilentIntergenicRegion 0 0.77 4.12 3.02 4.22 11.50 6.16 4.43 8.56 12.81 5.31 2.10 16.64 4.19 2.40 1.48 4.13 2.18 1.00 0.00 7.94 0.00 0.00 1.06 27 IG48_AR3 ActiveIntergenicRegion 0 0.82 4.07 2.47 5.90 6.56 9.70 5.13 8.82 13.43 5.74 1.75 35.96 9.87 2.92 1.91 4.79 3.84 2.97 0.82 7.28 0.57 0.00 0.38