Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-101P17.5 Gene 0 7.94 9.35 3.30 5.45 6.30 8.93 4.17 6.63 6.75 4.07 12.23 2.94 6.77 4.89 2.56 9.60 10.22 3.45 3.75 4.25 0.96 2.28 2.09 2 411525 Transcript 0 3.41 1.09 0.00 0.54 0.00 0.24 0.18 0.34 0.00 0.00 1.30 1.43 4.86 0.89 0.27 1.19 2.64 0.00 1.28 0.28 0.00 0.00 0.78 3 434601 Transcript 0 8.47 6.66 2.27 4.74 5.03 6.48 3.83 5.10 5.30 3.74 10.54 2.16 5.20 3.76 2.56 7.03 8.23 2.55 2.64 3.17 0.82 1.55 1.16 4 423575 Transcript 0 1.56 1.07 0.29 0.08 1.65 0.75 0.98 0.44 1.45 0.93 11.11 1.29 4.10 2.01 0.89 4.21 7.91 0.11 0.00 0.08 0.70 0.80 0.46 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 2.38 0.45 0.41 1.82 0.00 0.41 0.88 1.15 3.28 2.27 0.00 0.80 0.00 0.60 1.11 0.00 0.75 0.00 0.71 0.48 0.00 0.16 0.00 8 E2a_E3b KnownJunction 0 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 8.62 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 9 ER3a ExonRegion 0 3.42 2.51 0.00 0.00 3.39 2.26 1.85 0.12 0.08 0.42 9.47 3.03 0.00 0.00 0.29 0.35 5.67 0.00 0.00 0.00 1.84 2.40 0.00 10 E3_Ab KnownBoundary 0 3.26 6.05 1.21 0.00 4.33 5.05 2.25 0.00 0.00 2.53 2.68 0.00 0.00 0.00 0.00 0.00 13.18 4.39 3.48 0.00 5.50 6.00 0.00 11 ER3b ExonRegion 0 11.80 0.47 0.36 0.59 0.60 0.43 1.90 1.05 1.55 2.01 8.76 0.00 0.86 0.58 1.60 11.99 10.26 0.00 0.00 0.00 0.95 1.15 1.25 12 E3a_E4a KnownJunction 0 0.00 0.00 1.83 1.83 0.00 0.00 0.00 0.00 1.24 0.00 14.32 0.00 13.31 0.00 0.00 4.02 8.88 0.00 0.00 0.00 0.00 0.00 0.00 13 I3_AR3 ActiveIntronRegion 0 6.96 7.86 1.99 2.66 4.47 25.44 6.24 3.97 8.51 2.57 8.21 7.26 6.67 6.77 5.45 4.49 3.13 0.66 1.68 2.30 2.98 4.54 14.19 14 E4_Aa NovelBoundary 0 6.74 2.89 0.00 1.93 3.57 0.00 0.00 1.97 3.18 4.67 14.37 0.00 0.00 12.18 0.00 11.62 9.16 0.00 0.00 0.00 0.00 0.00 4.35 15 ER4a ExonRegion 0 9.61 0.00 0.59 0.88 1.92 3.30 0.34 1.53 1.79 1.36 29.63 0.00 3.42 8.79 0.00 12.76 17.90 0.00 0.00 1.28 0.00 1.25 0.00 16 E4a_E5a KnownJunction 0 3.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 1.67 10.21 0.00 6.66 2.12 0.00 3.25 8.51 0.00 0.00 0.00 0.00 0.00 0.00 18 E4a_E7a KnownJunction 0 13.26 0.00 0.00 1.93 3.48 0.00 2.12 0.00 0.00 3.87 7.26 0.00 0.00 7.06 0.00 10.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E4a_E10a NovelJunction 0 7.56 0.00 0.00 1.37 7.98 0.00 0.00 0.00 0.00 0.00 14.27 0.00 0.00 0.00 0.00 12.90 12.44 0.00 0.00 0.00 0.00 0.00 0.00 20 ER5a ExonRegion 0 3.11 2.17 0.00 1.08 0.00 0.49 0.35 0.69 0.00 0.00 2.60 2.86 9.72 1.79 0.55 2.38 5.29 0.00 2.55 0.57 0.00 0.00 1.57 21 E5_Da NovelBoundary 0 7.41 2.50 0.00 0.00 0.00 0.00 2.25 0.00 1.71 1.56 0.00 0.00 20.29 0.00 0.00 3.85 0.00 0.00 4.80 3.26 0.00 0.00 3.59 22 ER6a ExonRegion 0 1.24 0.72 0.86 0.24 1.57 0.00 1.09 1.21 2.47 0.69 13.63 0.84 5.64 3.91 2.37 9.03 9.57 0.32 0.00 0.25 0.26 0.00 1.38 23 E6_Da NovelBoundary 0 0.00 0.00 0.00 1.73 11.29 0.00 1.77 1.81 2.37 0.00 12.37 0.00 6.82 7.42 0.00 11.79 4.49 2.53 0.00 2.94 0.00 0.00 0.00 24 ER7a ExonRegion 0 6.05 0.00 0.00 1.44 2.55 0.00 1.01 0.00 4.42 2.75 9.98 0.00 5.63 3.00 3.32 6.31 6.51 0.00 0.06 0.00 1.07 0.00 0.00 25 E7_Da NovelBoundary 0 7.11 2.76 0.00 0.00 0.00 0.00 0.00 2.05 4.75 1.61 4.05 6.15 6.49 0.00 0.00 25.29 9.54 1.99 18.26 0.00 0.00 0.00 0.00 26 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 1.21 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER8a ExonRegion 0 3.55 0.48 0.00 0.07 2.44 0.00 3.14 1.83 4.74 1.99 7.05 0.00 1.83 2.05 0.49 6.35 7.78 0.00 1.48 0.00 0.00 0.00 0.00 28 E8_Da NovelBoundary 0 3.56 0.00 0.00 0.00 4.33 0.00 0.00 1.52 1.10 0.00 2.16 0.00 0.00 5.24 0.00 15.98 4.77 0.00 0.00 0.00 0.00 0.00 4.35 29 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 I8_SR1 SilentIntronRegion 0 3.25 0.31 0.00 0.31 1.23 0.28 3.25 0.40 3.11 0.00 7.42 0.55 9.96 0.82 0.63 3.20 9.13 0.28 3.91 1.63 0.00 0.32 0.90 31 E9_Aa NovelBoundary 0 0.00 0.00 4.88 0.00 4.33 0.00 1.99 2.30 1.30 2.69 4.63 0.00 43.67 0.00 0.00 22.05 4.39 0.00 0.00 0.00 0.00 2.88 7.85 32 ER9a ExonRegion 0 10.12 0.21 0.06 1.98 0.00 0.10 7.17 3.12 1.57 0.12 14.89 4.89 7.37 0.86 3.84 5.91 10.55 0.10 0.12 1.52 1.49 0.00 0.11 33 E9a_E10a KnownJunction 0 7.26 0.00 0.00 3.46 0.00 0.00 0.00 1.77 1.45 0.00 14.85 0.00 6.17 0.00 4.94 0.00 16.92 0.00 0.00 0.00 0.00 0.00 0.00 34 Ix_AR1 ActiveIntronRegion 0 15.25 41.33 21.98 32.80 27.78 34.37 14.67 24.12 16.35 14.35 5.13 9.13 11.42 2.77 3.20 3.96 0.55 1.54 4.51 9.04 0.37 11.11 2.93 35 Ix Intron 0 18.71 53.03 10.85 18.24 21.32 32.94 18.99 15.67 13.60 9.91 7.84 3.62 9.47 5.29 3.21 9.04 6.70 4.13 4.15 10.48 0.96 2.11 4.68 36 Ix_AR1 ActiveIntronRegion 0 9.65 26.82 11.59 17.19 11.75 3.64 9.04 5.33 12.98 3.95 11.60 0.00 5.09 6.58 2.75 17.08 1.79 0.28 0.38 7.72 0.00 2.54 0.00 37 Ix_SR1 SilentIntronRegion 0 20.67 58.72 10.77 18.58 23.41 39.10 21.14 17.88 13.82 11.18 7.13 4.37 10.43 5.06 3.33 7.48 7.74 4.94 4.95 11.11 1.16 2.04 5.66 38 E10_Aa NovelBoundary 0 25.26 67.42 49.11 62.10 28.86 44.80 13.56 47.81 32.61 40.05 20.16 12.60 14.77 16.66 4.45 47.68 18.14 21.85 91.48 37.78 5.81 29.64 19.12 39 ER10a ExonRegion 0 27.49 52.62 18.06 29.00 31.80 51.71 17.21 34.08 28.51 18.29 27.55 12.40 20.57 17.12 7.86 27.47 24.07 20.30 19.42 23.84 3.99 12.38 9.18