Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-45B20.1 Gene 0 9.33 9.24 632.91 6.45 35.57 1.03 9.19 3.78 15.83 99.88 0.45 3.07 3.16 1.32 1.58 1.52 1.51 276.58 59.67 8.66 1.28 1.41 3.35 2 359341 Transcript 0 9.18 2.94 633.84 5.53 22.02 0.25 8.03 2.22 12.36 83.29 0.02 0.31 0.32 0.23 0.65 0.25 0.12 201.73 36.79 2.54 0.16 0.13 0.50 3 442969 Transcript 0 23.23 26.39 789.66 15.04 81.59 3.58 21.63 11.69 21.52 122.41 1.95 13.08 13.27 4.99 4.59 5.80 6.56 178.70 72.51 20.37 5.33 5.95 13.68 4 420143 Transcript 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 IG45 Intergenic 0 0.54 1.10 156.70 0.81 5.03 0.03 1.68 0.75 5.12 33.10 0.00 0.03 0.05 0.02 0.03 0.00 0.11 125.95 27.08 1.48 0.04 0.03 0.14 6 IG45_SR3 SilentIntergenicRegion 0 0.01 0.05 20.30 0.11 0.23 0.00 0.11 0.02 0.31 0.13 0.00 0.02 0.08 0.02 0.04 0.00 0.12 4.88 0.33 0.07 0.03 0.03 0.15 7 IG45_SR2 SilentIntergenicRegion 0 1.23 3.01 363.73 1.68 15.17 0.09 5.13 1.53 13.61 98.79 0.00 0.09 0.00 0.03 0.00 0.00 0.00 372.92 90.56 4.06 0.11 0.00 0.00 8 IG45_AR2 ActiveIntergenicRegion 0 2.94 5.44 690.17 3.09 19.48 0.00 6.97 3.65 22.91 141.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 504.08 91.12 7.31 0.00 0.00 0.00 9 IG45_SR1 SilentIntergenicRegion 0 2.74 5.32 797.11 4.76 19.93 0.25 6.42 6.61 26.73 153.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 585.57 120.32 5.72 0.00 0.00 0.00 10 IG45_AR1 ActiveIntergenicRegion 0 3.05 1.90 721.85 6.68 23.50 0.56 4.04 1.94 16.48 130.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 451.91 81.45 6.24 0.00 0.00 0.00 11 ER1a ExonRegion 0 3.11 2.94 568.66 4.02 16.77 0.22 3.95 1.76 15.66 106.09 0.08 0.00 0.00 0.24 0.04 0.12 0.00 394.08 71.12 5.47 0.00 0.09 0.00 12 E1_Ab KnownBoundary 0 0.00 2.57 400.31 7.33 30.48 0.00 4.46 2.46 4.40 93.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 283.75 68.99 3.26 0.00 0.00 0.00 13 ER1b ExonRegion 0 3.96 2.90 587.68 3.47 16.84 0.00 4.56 1.99 13.04 87.53 0.00 0.00 0.35 0.00 0.00 0.00 0.00 338.16 47.07 4.67 0.00 0.00 0.00 14 E1_Ac KnownBoundary 0 3.78 5.72 657.25 0.00 11.04 0.00 12.54 10.84 18.08 103.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 315.34 48.28 5.62 0.00 0.00 0.00 15 ER1c ExonRegion 0 1.53 2.77 700.34 0.00 11.76 0.00 5.09 3.46 26.73 101.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 372.16 53.60 4.07 0.00 0.00 0.00 16 E1_Da KnownBoundary 0 3.26 0.00 820.85 11.82 23.34 0.00 16.96 0.00 28.88 98.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 441.11 59.30 0.00 0.00 0.00 0.00 17 E1a_E1d KnownJunction 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1d ExonRegion 0 10.79 7.80 654.30 3.16 31.27 0.00 7.92 2.12 19.52 89.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 261.20 49.70 6.58 0.00 0.00 0.00 19 E1_Ad KnownBoundary 0 13.11 2.50 760.80 40.79 46.52 2.73 7.82 12.36 35.85 144.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 435.51 97.13 6.46 0.00 0.00 0.00 20 ER1e ExonRegion 0 8.41 4.01 766.57 5.09 20.85 0.00 7.92 0.16 19.38 117.00 0.00 0.00 0.00 0.00 0.13 0.08 0.00 303.88 58.36 7.15 0.00 0.00 0.00 21 E1b_E2a KnownJunction 0 29.78 14.34 1203.92 10.42 39.73 0.00 11.61 2.14 14.44 169.04 0.00 0.00 0.00 0.00 5.07 0.00 0.00 598.88 99.58 13.93 0.00 0.00 0.00 22 ER2a ExonRegion 0 18.94 19.73 1453.76 13.42 75.62 0.00 14.32 2.18 24.15 201.73 0.00 0.00 0.00 0.00 1.03 1.16 0.00 550.24 105.37 14.43 0.00 0.00 0.00 23 E2a_E3a KnownJunction 0 27.04 29.34 2079.97 11.95 57.72 0.00 18.59 3.70 39.03 243.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 665.99 142.50 19.75 0.00 0.00 0.00 24 ER3a ExonRegion 0 27.69 16.91 1771.46 18.06 90.08 0.52 16.76 5.35 39.11 232.58 0.00 0.00 0.00 0.00 0.82 0.84 0.00 623.07 143.08 16.96 0.00 0.00 0.00 25 E3a_E4a KnownJunction 0 3.56 3.16 42.78 1.70 39.39 0.00 2.25 0.00 6.25 26.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84.65 18.64 9.46 0.00 0.00 0.00 26 E3a_E5a KnownJunction 0 26.45 0.00 1211.93 12.32 41.85 0.00 15.77 4.03 23.87 137.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 336.06 51.86 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 1.66 6.25 59.56 0.51 56.10 0.00 2.93 3.02 7.90 21.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.07 42.09 4.41 0.00 0.00 0.00 28 E4_Da KnownBoundary 0 6.30 22.56 105.61 9.16 68.17 14.76 73.93 23.82 22.51 47.57 7.21 13.95 0.00 19.78 10.51 11.45 20.94 44.36 43.77 22.31 0.00 0.00 4.27 29 ER4b ExonRegion 0 23.23 26.39 789.66 15.04 81.59 3.58 21.63 11.69 21.52 122.41 1.95 13.08 13.27 4.99 4.59 5.80 6.56 178.70 72.51 20.37 5.33 5.95 13.68 30 E4_Db NovelBoundary 0 7.11 34.47 45.74 92.30 27.84 11.02 8.04 57.71 83.54 86.15 2.47 0.00 0.00 0.00 0.00 19.74 13.09 123.16 15.25 8.18 3.15 8.39 7.94 31 E5_Aa NovelBoundary 0 223.30 120.11 111.20 176.63 185.65 87.45 249.03 154.36 95.66 94.10 48.96 12.00 77.59 32.26 10.38 128.00 94.16 70.64 61.65 113.71 40.34 59.89 104.31 32 ER5a ExonRegion 0 11.38 3.78 840.15 8.45 21.87 0.08 10.15 2.99 12.65 110.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 257.27 52.47 0.78 0.00 0.00 0.04 33 E5a_E6a KnownJunction 0 0.00 2.83 253.75 1.73 7.72 0.00 3.58 2.05 5.15 31.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 3.26 0.00 0.00 0.00 34 E6_Aa NovelBoundary 0 24.67 5.33 12.95 2.73 13.67 9.65 33.61 29.57 6.89 9.00 6.90 0.00 6.01 2.30 4.33 10.42 19.45 14.14 7.72 28.57 8.28 2.27 3.16 35 ER6a ExonRegion 0 4.95 5.13 294.73 1.11 21.88 0.93 6.72 0.27 4.45 30.68 0.00 1.55 1.62 0.92 3.22 1.11 0.62 16.84 8.48 3.17 0.82 0.58 2.47 36 IG44 Intergenic 0 0.75 0.54 25.91 0.36 4.23 0.00 1.04 0.00 1.82 8.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.38 2.54 0.66 0.00 0.00 0.00 37 IG44_SR4 SilentIntergenicRegion 0 0.00 0.53 15.74 0.00 2.80 0.00 0.69 0.00 1.44 6.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.72 1.67 1.67 0.00 0.00 0.00 38 IG44_AR4 ActiveIntergenicRegion 0 2.62 1.89 83.14 0.63 16.85 0.00 2.05 0.00 3.80 20.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.04 2.96 0.22 0.00 0.00 0.00 39 IG44_SR3 SilentIntergenicRegion 0 0.86 0.69 23.94 0.53 5.47 0.00 1.88 0.00 1.25 11.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.73 3.80 1.45 0.00 0.00 0.00 40 IG44_AR3 ActiveIntergenicRegion 0 0.04 0.56 21.33 0.36 0.80 0.00 0.78 0.00 2.40 5.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.35 1.45 0.78 0.00 0.00 0.00 41 IG44_AR1 ActiveIntergenicRegion 0 0.80 0.19 25.30 0.76 2.86 0.00 0.62 0.00 1.78 11.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.09 3.90 0.01 0.00 0.00 0.00