Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	EFHA1	Gene	0	104.92	174.20	51.65	144.68	131.71	115.19	73.17	115.96	102.10	93.05	83.62	151.16	125.57	95.68	105.46	70.06	60.23	25.42	48.79	56.27	32.42	118.79	55.28
2	382374	Transcript	0	0.00	0.00	0.00	0.00	0.00	6.20	0.55	0.00	0.00	0.00	1.53	0.00	0.00	0.00	2.39	0.00	0.00	0.71	0.00	0.00	0.00	0.00	0.00
3	468222	Transcript	0	0.00	10.20	4.97	9.09	40.41	8.69	12.72	2.09	8.22	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.36	0.00	6.39	0.00	0.00	0.00
4	469058	Transcript	0	0.00	0.46	0.00	1.78	1.80	1.19	1.00	0.00	0.81	0.43	0.01	0.00	0.88	2.03	2.15	0.67	3.01	1.13	0.00	2.63	0.00	1.31	0.67
5	476895	Transcript	0	0.21	0.19	0.00	0.19	0.27	0.00	0.24	0.00	0.36	0.00	0.37	0.00	0.02	0.02	0.50	0.55	0.30	0.25	0.59	0.79	0.40	0.00	0.29
6	480341	Transcript	1	8.46	31.83	15.60	59.85	52.75	43.69	29.42	23.43	19.96	24.39	3.60	11.74	26.78	8.94	6.95	4.19	4.82	4.89	16.60	21.77	0.00	9.95	2.78
7	460488	Transcript	0	49.47	70.73	36.71	111.57	69.48	73.09	48.73	60.01	52.53	53.39	38.55	88.75	120.77	53.60	52.10	30.17	19.84	10.31	14.25	22.84	10.25	68.91	29.75
8	479790	Transcript	0	17.31	15.50	8.32	21.38	23.97	15.58	14.86	13.52	13.30	8.34	4.46	11.45	17.73	8.14	17.10	7.77	7.79	6.65	6.99	8.85	4.68	11.53	11.96
9	478700	Transcript	0	58.30	47.56	19.52	59.47	60.81	44.52	24.78	52.32	36.49	30.12	13.78	12.82	16.89	21.46	19.77	19.50	13.11	19.84	26.81	16.84	14.22	22.26	24.91
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	6.20	0.55	0.00	0.00	0.00	1.53	0.00	0.00	0.00	2.39	0.00	0.00	0.71	0.00	0.00	0.00	0.00	0.00
11	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	11.13	3.75	0.00	0.00	0.00	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	1.63	8.32	21.07	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.36	0.00	4.31	0.00	0.00	2.97	0.00	3.84
13	ER1b	ExonRegion	0	0.40	0.38	0.00	0.00	1.34	17.42	2.65	0.65	0.00	0.00	2.17	0.00	0.00	0.51	6.35	0.19	0.41	2.08	0.60	0.40	0.41	0.13	0.00
14	ER1c	ExonRegion	1	35.46	16.89	6.83	14.91	21.78	70.63	26.39	29.92	23.14	40.52	60.44	8.41	19.90	69.54	48.13	68.74	69.58	25.54	38.68	28.41	57.00	41.51	38.64
15	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.90	0.00	0.00	1.53	0.00	0.00	0.00	0.00	2.47	4.82	0.00	0.00	1.82	0.00	0.00	0.00	3.12	0.00
16	E1a_E5a	KnownJunction	1	25.56	26.84	21.32	49.24	24.02	54.00	15.02	72.37	85.59	107.21	103.55	0.00	60.39	280.36	195.44	254.46	131.09	103.59	166.50	80.22	66.04	148.06	273.59
17	ER2a	ExonRegion	0	0.78	0.75	0.00	0.75	0.99	0.00	0.98	0.00	1.32	0.00	1.43	0.00	0.00	0.00	1.83	2.20	1.22	1.02	2.35	3.15	1.61	0.00	1.09
18	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	0.00	1.38	0.00	2.14	1.07	0.66	1.20	0.00	0.89	0.17	0.03	0.00	2.63	3.62	1.62	2.02	0.70	1.55	0.00	2.21	0.00	0.81	2.00
20	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	3.20	4.33	0.00	1.81	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	8.32	0.00	0.00	5.69	0.00	0.00	0.00
21	ER4a	ExonRegion	0	0.04	0.00	0.00	0.03	0.11	0.00	0.00	0.00	0.10	0.00	0.04	0.00	0.09	0.06	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06
22	E4_Da	NovelBoundary	0	38.97	22.96	10.53	27.74	12.05	0.00	31.18	32.08	30.50	39.94	5.11	0.00	22.73	2.24	8.78	38.02	8.60	23.63	8.00	31.58	5.87	0.00	33.55
23	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	46.33	107.09	28.09	81.52	173.06	297.88	88.20	119.53	143.52	122.40	199.56	168.76	165.64	234.87	149.98	291.95	144.82	111.75	121.67	104.07	102.83	164.89	220.90
25	E5a_E6a	KnownJunction	0	75.72	236.54	34.59	83.41	156.20	304.03	126.66	77.34	141.12	107.61	255.91	156.95	139.11	158.34	136.84	188.84	157.64	62.26	95.72	124.38	131.77	164.35	105.34
26	ER6a	ExonRegion	0	63.36	181.37	38.83	83.09	104.19	182.18	70.46	97.77	168.98	123.36	307.33	240.29	184.08	196.77	172.62	150.28	164.53	75.47	124.23	107.71	129.54	196.24	101.96
27	E6a_E7a	KnownJunction	0	99.65	189.44	35.84	71.69	93.21	80.47	30.87	98.08	141.49	108.28	258.75	354.42	231.15	262.17	194.57	113.73	168.30	63.34	130.07	107.00	123.62	211.19	123.01
28	ER7a	ExonRegion	0	79.54	139.43	50.47	103.38	81.40	90.85	55.85	137.91	188.76	150.05	207.05	325.68	193.46	279.52	189.84	142.04	179.03	63.80	96.57	103.36	135.62	202.87	122.88
29	E7a_E8a	KnownJunction	0	78.61	94.52	50.41	123.49	104.84	64.74	51.36	160.56	193.02	156.36	204.53	355.02	218.33	238.63	209.16	188.58	156.33	101.06	83.96	129.75	88.40	203.91	127.53
30	I7_SR1	SilentIntronRegion	0	8.35	6.86	4.49	7.16	8.36	1.60	21.18	2.69	8.09	2.64	0.97	0.00	7.87	0.00	0.31	7.91	7.07	0.00	8.30	5.85	0.00	0.63	0.00
31	ER8a	ExonRegion	0	127.83	103.67	59.63	111.08	142.43	81.07	85.23	141.37	189.31	144.70	294.57	389.47	217.50	256.07	187.86	361.05	155.49	95.62	111.09	152.26	119.28	293.21	160.72
32	E8a_E9a	KnownJunction	0	132.25	129.78	60.49	85.10	162.31	94.21	126.13	115.42	142.42	105.30	219.32	436.04	245.76	221.50	201.87	250.36	115.75	36.44	93.27	152.31	76.85	262.81	142.73
33	ER9a	ExonRegion	0	106.51	134.63	42.08	84.38	169.80	185.77	117.34	124.78	139.34	110.27	214.44	385.53	271.12	233.91	191.13	141.09	141.26	41.27	97.67	86.72	65.93	231.45	104.55
34	E9_Da	NovelBoundary	0	5.93	48.15	8.87	51.97	19.02	12.78	30.74	33.39	38.11	40.08	0.00	24.31	26.30	0.00	4.45	0.00	4.02	10.82	51.86	67.05	0.00	3.06	0.00
35	E9a_E10b	KnownJunction	0	0.00	10.20	4.97	9.09	40.41	8.69	12.72	2.09	8.22	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.36	0.00	6.39	0.00	0.00	0.00
36	E9a_E11a	KnownJunction	0	162.33	155.96	24.27	43.22	188.29	190.40	118.80	114.84	94.30	108.33	204.84	319.90	296.57	181.35	136.72	94.68	96.49	27.65	31.15	41.67	27.68	245.91	78.45
37	I9	Intron	0	9.70	52.50	17.41	89.59	45.06	34.41	47.00	35.62	42.53	36.12	1.49	7.64	11.59	1.49	2.92	5.37	4.47	12.82	32.33	41.88	1.55	2.54	2.55
38	I9_AR1	ActiveIntronRegion	0	8.14	85.67	12.08	63.70	29.35	13.95	33.88	32.70	30.69	42.05	0.68	13.28	9.15	0.51	2.22	4.02	2.51	4.32	21.49	31.94	0.26	2.64	1.38
39	I9_SR1	SilentIntronRegion	0	5.47	49.81	12.59	66.42	24.39	29.18	33.73	28.50	33.92	34.85	0.82	7.20	11.36	1.07	3.44	4.59	4.41	11.28	36.19	44.26	1.41	1.82	2.19
40	I9_AR2	ActiveIntronRegion	0	10.49	41.12	18.01	82.14	47.74	41.35	58.20	34.21	47.71	29.56	2.20	6.40	12.54	1.77	2.85	7.07	6.22	17.23	38.68	48.51	1.97	2.38	3.93
41	I9_AR4	ActiveIntronRegion	0	11.95	46.61	19.42	130.71	50.83	36.00	50.18	40.70	53.87	43.25	2.03	6.39	12.28	1.67	4.42	7.01	4.99	17.99	33.01	48.48	2.22	3.02	2.57
42	I9_SR3	SilentIntronRegion	0	7.33	55.21	21.10	93.38	53.72	31.32	41.67	33.74	33.51	28.94	1.21	7.29	10.20	1.57	1.77	2.81	2.20	6.37	21.65	27.84	1.89	3.37	0.92
43	I9_AR5	ActiveIntronRegion	0	25.40	63.38	39.21	154.01	118.18	73.66	75.25	64.53	54.14	56.77	0.00	12.99	5.47	1.89	0.97	0.00	3.30	5.54	40.88	27.66	0.00	2.08	0.00
44	I9_SR4	SilentIntronRegion	0	16.37	58.84	25.50	114.14	84.07	56.35	48.94	54.98	44.24	51.53	0.00	6.91	13.26	2.59	1.09	0.79	2.07	7.84	29.52	27.61	0.00	2.24	1.57
45	E10_Aa	NovelBoundary	0	14.00	36.84	33.41	134.52	66.89	37.76	52.38	86.26	39.61	35.67	0.00	0.00	6.66	2.47	9.89	0.00	0.00	6.01	24.57	34.39	0.00	3.06	0.00
46	ER10a	ExonRegion	0	9.05	38.46	28.75	87.48	75.74	71.88	43.72	35.84	24.40	35.38	0.02	0.69	8.08	2.06	6.64	0.00	0.00	7.72	21.04	26.88	0.00	1.05	2.73
47	E10a_E11a	KnownJunction	0	49.34	168.65	59.84	213.29	176.91	173.99	147.50	57.67	64.61	61.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.45	18.73	52.80	0.00	0.00	0.00
48	ER10b	ExonRegion	0	38.72	138.81	56.23	184.70	199.79	165.86	160.40	67.86	63.04	58.92	0.72	4.49	14.24	1.74	8.06	0.44	0.00	12.04	24.66	61.62	0.16	0.00	0.87
49	ER11a	ExonRegion	0	154.41	250.59	93.87	244.49	256.67	270.57	165.64	157.24	160.79	161.54	179.85	289.88	258.95	170.98	160.84	96.91	81.12	30.29	55.89	81.66	28.28	222.56	87.97
50	E11a_E12a	KnownJunction	0	257.23	313.56	126.13	297.50	276.91	212.15	165.52	164.75	165.13	166.06	153.46	276.24	284.72	191.71	230.55	114.50	86.11	23.42	78.21	85.52	29.41	250.57	93.73
51	ER12a	ExonRegion	0	224.46	303.65	108.41	264.33	271.38	196.70	151.77	156.11	176.04	166.48	165.92	340.20	249.81	190.62	189.34	113.72	79.05	25.97	74.10	87.57	25.52	249.69	83.62
52	ER12b	ExonRegion	0	181.53	272.03	103.15	278.20	264.99	228.41	156.91	191.24	174.57	182.52	200.40	329.89	327.38	215.31	191.74	118.46	121.37	24.09	56.77	99.92	23.61	234.14	66.97
53	E12_Db	NovelBoundary	0	147.73	186.74	93.70	250.18	233.45	176.94	148.65	192.76	127.66	155.77	165.73	257.63	347.70	155.04	169.60	83.48	94.06	13.76	51.01	66.73	12.48	167.23	57.79
54	E12c_E13b	KnownJunction	1	169.66	229.83	115.08	329.50	256.03	286.03	192.95	216.75	169.18	215.41	146.72	410.38	514.74	202.54	215.47	101.77	57.32	25.37	33.98	82.71	36.82	274.57	92.96
55	ER12c	ExonRegion	0	138.68	200.26	110.44	305.64	234.07	250.91	155.65	218.61	166.58	196.42	169.84	328.85	434.75	185.08	191.61	93.69	86.40	24.10	41.27	74.65	26.64	234.44	81.59
56	I12_SR4	SilentIntronRegion	0	1.41	6.44	1.73	15.29	7.26	6.26	8.50	9.69	9.40	7.38	4.22	12.88	29.48	2.72	3.45	6.07	10.22	6.46	6.42	14.41	0.94	8.02	2.65
57	I12_AR4	ActiveIntronRegion	0	2.59	8.98	1.20	18.57	7.04	11.58	10.18	9.92	12.02	7.44	4.10	10.37	25.41	4.72	4.54	7.79	8.23	4.45	8.54	14.71	2.46	10.52	7.91
58	I12_SR5	SilentIntronRegion	0	4.02	6.10	6.56	27.05	17.26	6.42	5.89	9.77	20.81	3.33	7.63	23.81	37.29	0.97	7.25	5.65	6.27	5.08	9.56	11.06	2.20	5.10	5.29
59	I12_AR5	ActiveIntronRegion	0	1.95	11.52	5.18	20.42	13.15	13.87	13.61	11.54	13.23	5.62	4.64	19.73	34.32	2.73	4.69	6.54	6.90	7.30	8.39	9.37	0.59	5.41	7.81
60	I12_AR6	ActiveIntronRegion	0	0.00	6.45	2.45	19.36	13.01	9.99	15.98	11.15	12.18	14.08	6.40	21.50	22.16	3.81	15.01	5.02	15.82	13.38	5.38	8.44	4.26	13.44	21.97
61	I12_AR7	ActiveIntronRegion	0	7.67	22.30	2.33	18.95	11.37	4.55	13.32	7.47	11.52	8.19	7.80	12.55	18.80	6.50	3.29	9.25	17.15	11.16	8.21	13.18	6.35	7.56	9.26
62	E13_Ac	NovelBoundary	0	209.67	196.28	125.48	339.48	270.80	279.78	227.84	199.04	174.85	182.96	140.88	351.86	402.08	211.55	210.27	144.49	72.37	26.45	65.13	105.21	12.60	311.31	88.01
63	ER13a	ExonRegion	1	80.43	96.60	58.82	163.55	123.08	126.53	85.40	109.76	82.75	100.93	74.42	177.51	241.54	107.19	98.64	53.50	31.36	13.86	23.89	34.04	14.32	135.43	51.39
64	ER13b	ExonRegion	1	160.41	205.90	123.97	333.51	250.18	290.66	179.84	213.68	174.97	204.39	159.79	397.41	484.83	227.51	186.28	127.80	76.06	32.72	62.78	88.47	26.90	303.59	96.05
65	ER13c	ExonRegion	0	165.12	208.32	114.49	295.53	304.11	347.39	221.62	179.64	176.45	177.83	169.06	431.06	389.91	233.65	204.19	138.27	136.35	35.99	93.24	108.93	37.72	276.80	97.33
66	E13_Da	KnownBoundary	1	10.30	25.46	10.79	53.94	43.29	7.78	16.12	11.79	22.51	19.29	4.11	17.56	61.68	18.19	9.64	12.48	21.60	5.68	13.37	48.26	0.00	52.84	19.55
67	E13a_E14b	KnownJunction	0	274.42	185.30	142.40	330.93	272.67	218.40	213.44	239.01	182.41	201.81	268.59	325.31	286.18	272.35	248.59	186.36	194.39	26.99	85.74	113.20	92.48	323.31	145.37
68	E13a_E14c	KnownJunction	0	18.52	44.86	14.61	59.60	15.87	19.65	12.06	10.27	22.31	5.86	2.68	0.00	0.00	0.00	5.56	6.84	8.32	6.76	4.61	11.63	6.18	2.39	8.11
69	ER13d	ExonRegion	1	7.87	25.20	2.45	32.23	29.76	15.50	15.13	11.02	15.52	13.39	7.18	22.78	45.48	15.81	7.27	8.38	9.64	2.05	12.16	16.66	0.00	18.86	2.82
70	E13_Db	NovelBoundary	0	16.15	24.07	15.64	42.82	37.95	47.30	38.16	33.31	23.12	21.03	17.11	88.08	65.74	24.02	23.98	3.93	13.28	5.60	0.00	36.82	0.00	16.90	24.33
71	I13	Intron	0	15.69	16.10	6.17	27.68	34.38	16.83	16.49	20.20	13.42	11.00	4.10	16.54	34.09	14.97	12.83	10.38	5.94	5.63	10.89	8.73	2.22	14.70	13.32
72	I13_SR1	SilentIntronRegion	0	15.70	16.11	6.17	27.69	34.41	16.84	16.50	20.21	13.43	11.00	4.11	16.56	34.11	14.99	12.83	10.38	5.94	5.63	10.90	8.74	2.22	14.71	13.32
73	E14_Aa	NovelBoundary	0	39.19	15.00	36.69	86.00	8.49	13.51	18.77	72.37	53.30	35.00	16.27	6.30	25.81	12.54	14.59	34.44	13.09	24.54	40.38	17.13	8.15	22.35	46.52
74	ER14a	ExonRegion	0	58.30	47.56	19.52	59.47	60.81	44.52	24.78	52.32	36.49	30.12	13.78	12.82	16.89	21.46	19.77	19.50	13.11	19.84	26.81	16.84	14.22	22.26	24.91
75	E14_Ab	KnownBoundary	0	138.77	75.51	30.57	115.24	133.79	43.90	36.57	86.54	36.23	54.15	14.27	31.36	45.61	19.13	14.34	4.36	16.64	26.53	18.17	23.78	7.35	36.01	29.11
76	ER14b	ExonRegion	0	259.41	313.02	111.41	366.78	303.65	284.65	191.70	266.49	220.46	201.52	261.75	432.63	281.18	257.53	228.80	187.79	209.67	52.99	159.98	133.85	115.47	254.09	163.80
77	E14_Da	KnownBoundary	0	21.63	20.92	6.21	21.98	8.57	16.24	2.25	14.01	9.49	9.24	2.05	6.15	6.17	0.00	8.90	12.30	3.83	4.02	8.56	6.39	0.00	9.31	8.19
78	E14a_E14c	KnownJunction	0	267.38	327.24	88.29	310.92	299.15	252.98	184.07	219.29	202.92	187.85	275.39	328.46	277.42	243.28	210.64	140.65	213.65	67.44	163.02	107.06	116.45	130.12	116.18
79	ER14c	ExonRegion	0	27.56	24.90	10.51	25.49	23.87	17.71	19.13	16.67	20.42	14.77	6.99	15.68	22.95	13.57	16.78	13.56	12.27	13.30	12.93	14.86	9.36	16.11	18.04
80	E14_Ac	KnownBoundary	0	68.53	41.11	10.88	37.06	35.82	23.17	35.15	17.46	28.67	11.95	4.47	18.31	6.82	7.24	9.15	16.06	0.00	2.24	4.80	12.91	0.00	11.63	8.54
81	ER14d	ExonRegion	0	383.35	629.96	114.19	367.81	301.78	260.31	163.59	230.53	230.68	189.78	220.01	326.17	211.32	226.53	218.33	147.75	163.93	48.95	142.79	126.43	96.12	228.93	129.21
82	E14b_E15a	KnownJunction	0	507.87	1067.31	113.27	288.57	381.15	154.12	135.93	200.44	200.66	185.64	129.19	288.09	126.13	167.29	192.84	115.27	103.04	24.21	66.26	66.41	50.10	183.70	72.73
83	ER15a	ExonRegion	1	365.95	837.45	133.85	404.36	425.59	251.11	200.81	287.15	234.28	235.90	96.63	358.17	273.28	153.21	254.09	88.85	74.61	20.74	60.47	112.89	21.66	279.98	75.18
84	E15_Da	KnownBoundary	1	395.55	1118.42	173.35	468.47	273.26	161.33	127.32	378.21	261.92	200.71	50.38	305.35	407.44	147.10	193.58	62.63	50.40	15.88	58.92	129.05	8.59	264.90	85.36
85	ER15b	ExonRegion	0	223.16	507.74	152.63	426.24	256.38	146.03	102.64	412.37	296.29	261.69	135.58	361.76	297.41	145.77	311.96	74.75	72.64	13.48	60.18	114.82	19.00	302.57	56.08
86	E15_Db	KnownBoundary	1	239.23	311.52	158.84	493.98	460.95	249.69	146.80	389.18	302.34	221.77	116.98	212.02	366.53	105.01	249.58	59.73	75.92	15.50	44.99	125.28	22.24	222.95	42.08
87	ER15c	ExonRegion	1	80.06	104.81	98.63	243.34	134.31	88.80	55.32	234.92	167.75	142.00	93.09	198.22	177.85	78.27	181.04	49.27	44.57	10.19	40.78	71.72	14.57	204.87	35.59
88	ER15d	ExonRegion	0	7.06	6.10	6.13	17.26	24.08	13.45	10.59	10.37	6.18	1.91	1.93	7.22	12.51	2.71	17.41	1.98	3.30	0.00	1.06	2.84	0.00	6.95	5.87
89	IG20_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	14.99	0.00	0.00	1.32	0.00	0.00	0.00	0.00	25.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00