Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC7A1 Gene 0 9.82 32.95 22.67 26.78 12.70 49.09 25.58 21.90 24.23 47.68 105.15 99.29 129.28 105.03 35.69 74.27 86.55 145.71 54.14 102.48 49.55 48.69 43.54 2 380752 Transcript 0 9.17 47.57 37.73 44.20 27.63 101.96 51.35 45.31 57.68 111.07 248.14 283.13 343.96 274.67 73.73 185.68 224.90 357.17 153.42 271.54 123.03 120.57 111.78 3 450494 Transcript 0 0.78 0.76 0.03 0.00 0.00 2.06 1.99 0.00 0.00 0.03 0.78 5.63 1.45 0.51 0.90 2.27 0.00 0.00 0.00 1.56 0.00 0.02 0.00 4 473577 Transcript 0 1.17 2.97 1.24 3.10 0.99 3.20 4.29 0.58 0.87 5.71 3.09 3.66 1.49 4.47 1.61 3.32 2.43 15.16 4.96 8.56 3.39 3.47 1.56 5 IG15_AR3 ActiveIntergenicRegion 0 7.32 8.01 15.27 38.05 0.00 24.11 0.00 6.12 15.31 6.68 0.00 4.89 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00 0.00 6 IG15_AR1 ActiveIntergenicRegion 0 0.00 2.10 0.00 0.00 0.00 0.94 4.09 0.00 0.95 0.88 6.97 1.84 6.40 19.34 8.44 0.00 3.40 6.61 16.41 10.94 10.19 2.15 15.13 7 ER1a ExonRegion 0 1.28 3.00 5.73 1.96 1.69 10.17 4.12 4.20 6.28 8.50 40.22 13.78 19.23 53.64 14.28 22.35 27.42 25.49 20.07 32.04 24.21 11.24 14.51 8 E1a_E3a KnownJunction 0 0.00 9.54 12.83 3.96 8.15 21.52 5.74 16.18 18.95 26.32 70.60 47.72 64.93 149.04 28.18 44.26 66.67 142.77 137.79 84.37 26.32 49.17 66.84 9 E1a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.71 0.00 0.00 13.18 9.20 0.00 0.00 0.00 0.00 0.00 10 I1_SR3 SilentIntronRegion 0 1.82 7.84 8.26 8.07 4.04 1.45 9.87 2.32 1.95 3.79 0.98 24.33 12.08 0.73 2.57 3.21 4.55 4.27 5.71 12.37 1.92 0.75 4.55 11 I1_AR6 ActiveIntronRegion 0 5.29 5.96 5.34 3.99 0.00 1.05 2.18 3.46 0.00 2.29 0.00 18.25 0.00 0.00 2.90 5.31 11.55 15.18 5.92 5.47 0.00 2.08 11.12 12 E2_Aa NovelBoundary 0 6.67 3.35 9.25 1.50 4.33 16.98 31.05 5.09 5.12 1.67 2.37 5.40 14.28 0.00 0.00 3.33 0.00 13.97 4.71 6.26 0.00 0.00 0.00 13 ER2a ExonRegion 0 1.56 1.53 0.05 0.00 0.00 4.13 3.97 0.00 0.00 0.05 1.56 11.27 2.90 1.03 1.79 4.55 0.00 0.00 0.00 3.13 0.00 0.03 0.00 14 E2_Da NovelBoundary 0 3.78 22.10 7.84 14.72 7.81 6.81 12.10 11.05 1.33 0.00 0.00 24.01 28.73 2.30 4.45 0.00 8.23 6.72 0.00 14.38 0.00 0.00 8.71 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 3.78 0.00 15.20 3.60 19.86 11.47 17.93 0.00 4.72 0.00 0.00 0.00 0.00 0.00 0.00 4.19 3.65 12.89 8.85 5.94 2.97 6.18 0.00 17 ER3a ExonRegion 0 0.02 13.75 20.84 22.11 5.51 40.36 15.98 18.24 36.00 59.21 147.50 101.79 91.41 148.30 42.91 46.93 134.45 142.28 66.16 178.17 73.54 51.21 32.01 18 E3_Da NovelBoundary 0 0.00 0.00 16.41 10.35 7.47 0.00 1.85 1.85 1.27 6.74 2.16 0.00 0.00 0.00 0.00 8.37 3.83 9.08 13.46 11.12 0.00 0.00 6.91 19 E3a_E4a KnownJunction 0 0.00 19.93 30.01 18.31 0.00 82.23 28.53 22.96 44.53 92.19 233.85 192.51 180.35 185.65 44.38 72.20 160.17 176.55 93.74 211.18 83.89 46.84 39.69 20 I3_AR4 ActiveIntronRegion 0 7.00 3.44 1.46 1.52 5.35 0.00 16.80 4.59 2.99 10.63 1.19 4.66 11.73 2.19 2.90 0.00 11.68 6.40 0.00 14.16 2.63 1.68 3.16 21 I3_AR5 ActiveIntronRegion 1 3.92 4.78 3.06 0.34 2.01 1.83 5.30 2.42 1.24 9.58 0.00 19.92 6.10 2.76 3.34 0.00 10.56 3.70 0.00 6.81 5.84 2.08 2.94 22 ER4a ExonRegion 0 2.52 20.20 29.70 29.23 9.24 70.01 28.06 29.39 45.23 93.94 247.84 140.63 192.32 237.25 82.65 145.41 184.30 350.53 124.04 247.38 124.37 84.67 83.16 23 E4b_E5a KnownJunction 0 11.26 34.99 37.67 19.84 26.74 72.74 35.02 52.66 55.61 89.13 208.21 173.61 174.66 318.97 57.23 193.45 182.61 252.20 168.95 238.03 134.98 83.28 83.23 24 ER4b ExonRegion 0 8.47 21.56 29.41 18.54 26.22 71.52 30.98 43.56 52.62 90.38 223.83 179.24 199.80 301.76 68.47 168.82 192.11 266.82 145.25 225.53 145.44 83.34 93.39 25 ER5a ExonRegion 0 11.59 35.91 30.56 44.02 16.07 105.80 50.86 50.92 61.91 116.40 279.50 249.94 386.68 343.98 97.80 207.26 241.44 315.94 154.86 282.35 143.56 114.11 127.77 26 E5a_E6a KnownJunction 0 15.48 75.78 36.25 46.18 43.63 136.46 84.17 65.06 76.71 149.08 373.94 459.60 415.72 366.36 83.07 233.44 279.57 310.32 215.54 359.85 155.37 161.72 121.90 27 ER6a ExonRegion 0 10.18 50.22 45.64 53.71 35.55 120.01 63.04 60.06 66.58 149.45 318.91 394.45 452.23 351.63 77.44 213.70 303.72 385.06 189.85 287.87 144.11 140.00 132.90 28 E6_Da NovelBoundary 0 0.00 0.00 0.00 6.89 3.14 0.00 8.48 1.77 1.33 2.47 2.68 39.01 25.81 5.47 0.00 3.25 9.54 13.72 24.19 16.75 10.69 5.82 8.11 29 E6a_E7a KnownJunction 1 19.71 35.19 51.33 52.04 24.28 107.10 41.69 53.19 76.79 146.85 238.74 415.19 514.90 334.39 58.84 243.78 290.14 467.47 208.19 283.03 158.52 153.57 153.40 30 I6_SR1 SilentIntronRegion 0 2.25 2.29 1.76 4.24 1.51 1.37 5.62 2.16 2.84 4.04 7.90 22.78 18.63 8.27 4.39 7.14 8.29 8.29 7.99 14.72 5.01 6.38 3.99 31 I6_AR2 ActiveIntronRegion 0 4.23 0.00 2.45 2.73 0.00 0.00 6.62 1.73 1.44 7.84 14.82 15.87 4.69 9.47 8.70 2.97 5.50 7.39 12.74 23.40 6.98 10.42 4.89 32 I6_AR3 ActiveIntronRegion 0 6.35 0.00 2.45 2.73 0.00 1.83 6.62 1.73 2.47 8.03 14.36 15.46 4.69 9.74 5.80 5.94 4.72 12.93 15.93 16.72 11.02 10.72 2.94 33 I6_AR4 ActiveIntronRegion 0 4.88 0.00 2.88 2.49 0.00 1.83 4.09 0.83 2.58 6.03 12.77 15.62 6.93 12.64 0.00 6.46 9.19 13.58 10.25 12.40 11.02 11.32 0.00 34 E7_Aa NovelBoundary 0 3.63 0.00 8.22 0.00 3.48 0.00 0.00 0.00 2.72 3.14 19.27 12.60 6.82 9.18 0.00 10.85 8.88 20.64 0.00 17.77 20.20 10.90 4.35 35 ER7a ExonRegion 0 8.45 54.16 42.47 55.09 23.82 87.18 60.99 42.66 67.62 123.72 303.37 394.87 363.52 299.80 82.28 237.36 271.38 430.39 164.88 283.29 164.79 162.41 166.55 36 E7a_E8a KnownJunction 0 5.93 55.85 30.42 34.39 23.68 117.03 80.11 38.69 59.61 135.79 257.75 404.68 491.69 271.88 80.10 150.22 306.97 344.02 118.50 263.21 132.94 117.51 123.01 37 ER8a ExonRegion 0 9.61 48.71 36.18 48.48 29.19 109.01 61.93 34.78 60.16 113.87 251.35 303.43 306.85 287.46 87.09 197.59 268.38 448.56 146.76 307.23 128.85 134.48 133.56 38 E8a_E9a KnownJunction 0 6.37 39.93 21.97 22.81 27.93 96.71 49.95 30.56 52.40 102.80 180.41 301.45 253.88 253.93 53.40 140.56 230.86 334.40 105.13 317.09 79.88 119.96 93.30 39 ER9a ExonRegion 0 17.37 68.17 42.56 58.69 49.94 165.03 100.18 45.01 67.45 148.38 278.61 326.38 388.80 314.27 95.62 226.92 281.71 398.80 150.35 377.32 131.88 131.98 108.97 40 E9a_E10a KnownJunction 0 3.19 67.49 39.77 71.09 30.05 162.69 75.03 49.08 68.05 136.24 279.81 364.62 607.10 292.72 64.28 241.13 355.31 564.35 184.29 419.49 155.74 190.25 115.58 41 ER10a ExonRegion 0 5.40 57.75 34.19 65.59 21.81 127.04 63.25 45.33 71.24 129.69 310.62 296.14 496.79 306.02 64.12 248.62 272.08 492.84 164.60 358.30 162.19 162.36 139.86 42 E10_Ab KnownBoundary 0 13.85 82.55 41.31 88.23 28.52 111.07 69.20 48.67 80.79 139.63 311.03 233.93 442.02 345.34 97.16 327.95 261.80 535.33 193.42 355.19 179.77 166.56 162.79 43 ER10b ExonRegion 0 11.93 78.47 47.48 74.53 15.16 71.87 49.81 52.32 81.13 125.50 363.85 292.89 398.06 331.96 85.75 233.95 340.20 394.25 171.05 329.31 159.86 161.16 140.87 44 E10a_E11a KnownJunction 0 7.26 91.04 48.87 78.11 20.20 78.82 53.04 64.53 87.99 135.20 363.62 320.35 331.47 303.49 88.14 191.66 282.09 298.59 181.65 316.90 189.04 169.74 117.89 45 ER11a ExonRegion 0 13.57 79.65 55.20 88.66 43.54 164.21 84.69 76.93 105.00 166.50 472.63 409.63 561.32 367.94 97.47 285.43 334.28 565.02 240.17 346.52 175.83 206.75 159.04 46 E11a_E12a KnownJunction 0 13.48 89.13 63.57 79.31 37.35 150.20 96.19 102.81 103.99 174.12 388.68 276.09 313.62 242.51 34.86 272.15 270.03 471.62 310.03 296.06 181.56 206.91 138.63 47 ER12a ExonRegion 0 7.68 85.36 59.39 75.46 26.52 119.82 59.28 62.49 76.48 137.21 331.76 364.58 512.22 303.19 101.63 225.53 241.08 491.27 155.59 309.39 149.71 145.25 118.12 48 E12_Da KnownBoundary 0 0.00 5.92 6.77 1.73 0.00 8.01 17.05 1.97 1.79 3.17 4.69 6.30 0.00 4.83 0.00 0.00 0.00 10.45 4.71 12.27 5.68 0.00 0.00 49 E12a_E13a KnownJunction 0 10.08 97.48 67.80 98.62 48.13 165.87 55.29 101.82 96.12 151.04 400.84 366.12 600.61 348.99 140.18 307.18 231.70 592.29 285.09 361.20 166.18 219.58 188.65 50 ER12b ExonRegion 0 1.17 2.97 1.24 3.10 0.99 3.20 4.29 0.58 0.87 5.71 3.09 3.66 1.49 4.47 1.61 3.32 2.43 15.16 4.96 8.56 3.39 3.47 1.56 51 E13_Aa NovelBoundary 0 0.00 2.96 1.83 6.99 0.00 5.56 0.00 1.73 4.43 3.89 7.00 5.40 0.00 6.83 4.45 4.10 8.51 10.16 0.00 12.34 0.00 2.94 15.79 52 ER13a ExonRegion 0 12.29 59.68 63.76 72.78 34.10 112.27 44.46 66.27 61.74 136.49 325.24 321.97 414.36 319.10 116.18 232.97 231.52 525.35 170.99 345.62 147.85 133.36 129.02 53 E13a_E14a KnownJunction 0 6.59 58.94 70.49 52.91 44.82 117.26 52.11 46.50 64.76 132.21 330.35 327.86 327.74 262.11 112.74 184.91 206.17 428.09 163.49 293.76 114.54 99.81 111.91 54 I13 Intron 0 1.53 3.00 3.48 6.87 2.37 5.36 4.08 5.16 2.96 7.63 9.20 3.68 3.56 8.12 3.80 8.29 8.45 30.56 6.80 17.46 9.47 9.30 4.14 55 I13_SR1 SilentIntronRegion 0 1.54 3.04 3.52 6.94 2.40 5.42 4.13 5.22 3.00 7.68 9.31 3.69 3.60 8.21 3.85 8.35 8.53 30.91 6.88 17.66 9.59 9.40 4.20 56 ER14a ExonRegion 0 11.03 29.49 17.76 19.19 9.07 31.92 16.68 14.44 11.33 23.91 42.28 38.48 55.71 42.65 19.54 33.40 33.35 61.02 20.42 39.77 20.18 22.72 19.42