Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FLT1 Gene 0 32.18 16.59 68.91 58.41 65.71 15.80 15.27 51.49 96.33 54.59 8.45 20.78 9.49 30.83 5.29 33.83 80.59 0.04 0.05 0.17 9.96 47.06 37.78 2 282397 Transcript 0 20.48 12.95 57.70 42.97 52.26 15.62 14.27 50.14 110.69 55.77 10.57 30.26 12.70 42.27 5.92 46.41 115.46 0.00 0.00 0.01 12.44 57.69 49.32 3 ER1a ExonRegion 0 1.25 1.19 8.09 2.60 2.96 2.23 0.62 3.95 18.07 9.78 1.99 0.58 0.62 13.30 0.66 14.53 37.75 0.00 0.00 0.00 6.35 10.34 13.82 4 E1a_E2a KnownJunction 0 3.56 6.38 18.33 8.09 16.55 5.56 5.83 18.89 57.32 40.91 6.53 6.45 0.00 33.49 6.30 47.77 80.50 0.00 0.00 0.00 6.24 26.45 43.54 5 E2_Aa NovelBoundary 0 0.00 0.00 24.42 1.63 0.00 0.00 2.08 5.01 1.68 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER2a ExonRegion 0 6.85 9.92 41.95 19.81 34.32 28.72 16.05 25.02 88.56 37.04 11.24 11.07 0.00 55.07 2.54 47.25 165.21 0.00 0.00 0.00 23.81 59.24 48.02 7 E2a_E3a KnownJunction 0 18.23 9.27 30.19 20.14 7.64 13.91 0.00 35.53 91.35 41.80 9.32 6.15 0.00 44.79 4.45 46.65 197.48 0.00 0.00 0.00 9.08 57.74 24.24 8 ER3a ExonRegion 0 14.25 10.11 62.89 35.85 22.40 12.19 16.48 38.22 150.47 49.93 15.91 38.16 4.59 73.52 5.37 66.04 217.61 0.00 0.00 0.00 16.01 89.77 60.26 9 E3_Da NovelBoundary 0 0.00 0.00 46.42 5.86 0.00 0.00 2.08 0.00 5.35 0.00 0.00 30.61 0.00 2.47 6.18 7.78 21.13 0.00 0.00 0.00 0.00 0.00 0.00 10 E3a_E4a KnownJunction 0 6.52 11.31 85.92 73.85 99.58 30.66 47.52 50.15 198.41 64.25 21.53 45.01 14.28 80.41 5.07 96.04 271.62 0.00 0.00 0.00 11.00 171.15 81.95 11 I3_AR1 ActiveIntronRegion 0 3.06 0.89 18.61 4.49 3.13 0.00 4.30 1.51 5.50 1.19 0.28 0.52 0.56 0.75 0.00 5.21 10.09 0.00 0.00 0.00 0.00 1.83 0.86 12 ER4a ExonRegion 1 6.91 11.34 58.60 39.35 56.28 13.38 17.68 51.72 172.08 68.39 11.30 81.01 19.55 76.96 5.45 94.99 199.69 0.00 0.00 0.00 10.54 98.89 82.32 13 E4_Da NovelBoundary 1 3.19 0.00 1.27 1.33 4.07 0.00 2.25 3.41 2.78 0.00 0.00 0.00 0.00 2.71 0.00 3.93 44.04 0.00 0.00 0.00 0.00 0.00 0.00 14 E4a_E5a KnownJunction 1 16.45 9.74 91.54 58.70 30.39 4.60 16.08 70.52 196.73 97.48 21.85 110.59 0.00 83.58 10.63 162.27 288.55 0.00 0.00 0.00 11.06 108.20 128.39 15 ER5a ExonRegion 1 21.58 15.27 68.85 53.42 49.66 14.55 21.64 68.64 189.18 78.47 14.23 73.81 22.70 83.53 2.31 101.40 251.58 0.00 0.00 0.00 17.26 87.83 83.20 16 E5a_E6a KnownJunction 1 32.45 15.26 89.74 69.12 135.82 16.52 37.01 94.51 215.85 91.01 14.90 111.19 56.00 71.11 0.00 163.29 295.93 0.00 0.00 0.00 35.83 121.18 191.64 17 ER6a ExonRegion 1 18.38 15.14 76.40 48.41 63.59 12.68 20.14 56.94 144.91 53.61 11.26 59.10 25.50 77.33 1.08 80.44 214.12 0.00 0.00 0.00 17.92 75.17 83.75 18 E6a_E7a KnownJunction 0 16.97 28.15 55.70 31.30 41.17 15.62 14.26 56.64 134.37 47.84 19.43 68.72 13.31 57.39 0.00 60.67 191.58 0.00 0.00 0.00 11.98 52.48 62.49 19 ER7a ExonRegion 1 16.91 10.25 72.92 39.13 67.25 15.51 22.12 49.67 136.98 47.84 15.93 77.76 20.74 74.12 3.42 55.03 211.52 0.00 0.00 0.00 11.75 78.09 69.49 20 E7a_E8a KnownJunction 0 17.04 17.63 71.02 29.87 107.98 20.50 15.59 63.42 119.07 40.24 14.64 49.07 18.83 84.23 4.45 68.96 240.39 0.00 0.00 0.00 14.27 70.30 95.95 21 ER8a ExonRegion 0 21.40 14.08 73.74 35.23 43.56 11.19 11.88 65.39 133.08 59.15 20.51 78.04 21.58 86.41 10.01 90.25 214.11 0.00 0.00 0.00 17.44 94.43 67.92 22 E8a_E9a KnownJunction 1 20.67 9.21 92.16 47.15 52.55 10.51 4.42 64.20 130.58 71.72 10.16 112.84 13.64 105.36 0.00 75.88 243.95 0.00 0.00 0.00 17.85 82.48 51.73 23 ER9a ExonRegion 0 14.84 18.92 110.88 59.37 63.84 19.32 20.93 77.62 157.27 73.24 22.32 75.18 22.10 84.13 19.57 110.69 204.44 0.00 0.00 0.00 22.93 88.40 62.26 24 E9a_E10a KnownJunction 1 31.34 18.68 98.96 73.48 65.03 23.17 32.37 73.44 163.11 89.24 21.53 121.24 38.31 124.14 10.75 111.94 192.61 0.00 0.00 0.00 24.53 76.42 52.50 25 ER10a ExonRegion 0 31.96 21.44 103.80 61.54 61.48 17.10 19.02 61.82 144.00 73.76 25.14 81.50 26.85 86.29 22.38 104.17 222.91 0.00 0.00 0.00 21.91 70.29 66.90 26 E10a_E11a KnownJunction 0 40.23 5.39 101.95 48.55 79.71 26.01 34.01 62.93 155.93 77.39 34.06 73.52 26.13 111.60 24.35 107.49 217.02 0.00 0.00 0.00 30.33 72.68 67.18 27 I10_SR1 SilentIntronRegion 0 4.39 3.47 1.81 10.96 3.67 0.00 3.21 3.18 3.19 2.56 0.71 0.81 1.65 1.51 1.58 12.62 12.60 0.00 0.00 0.00 0.00 0.56 2.60 28 I10_AR2 ActiveIntronRegion 0 8.03 4.05 6.04 26.09 11.85 0.99 2.45 4.73 8.15 8.67 0.35 0.64 1.20 0.98 0.47 6.05 6.84 0.00 0.00 0.00 0.40 0.41 2.11 29 I10_SR3 SilentIntronRegion 0 2.67 1.53 3.82 20.12 4.07 0.28 1.62 4.62 6.31 6.39 0.23 2.78 1.37 0.96 1.17 7.17 5.83 0.00 0.00 0.06 0.26 1.43 2.28 30 ER11a ExonRegion 0 19.73 13.60 88.45 47.77 75.06 24.96 21.84 55.87 141.60 73.59 29.18 93.06 52.41 102.12 13.62 88.26 237.87 0.00 0.00 0.00 14.08 66.07 74.87 31 E11a_E12a KnownJunction 1 13.48 25.85 89.53 44.55 76.91 36.46 12.54 58.41 119.67 74.19 19.27 36.76 33.11 86.00 9.39 46.74 238.15 0.00 0.00 0.00 27.99 92.16 83.66 32 ER12a ExonRegion 0 23.81 16.51 99.43 48.68 56.93 17.01 20.49 60.24 153.02 69.31 29.33 65.50 44.10 94.54 19.35 97.64 231.18 0.00 0.00 0.00 12.01 74.17 68.73 33 E12a_E13a KnownJunction 0 32.38 17.69 144.73 72.62 89.47 10.85 22.43 93.28 174.88 85.07 31.32 50.42 98.69 112.49 15.70 74.08 227.40 0.00 0.00 0.00 7.72 119.10 62.74 34 ER13a ExonRegion 0 23.62 15.74 105.97 55.95 72.25 18.12 27.34 61.66 142.57 73.35 29.22 60.56 43.77 83.95 25.70 98.56 213.13 0.00 0.00 0.00 10.75 96.94 67.82 35 E13_Da NovelBoundary 0 7.33 6.71 46.75 46.58 59.42 8.46 10.73 34.30 54.54 45.13 22.22 18.16 41.39 35.08 0.00 28.97 106.87 0.00 0.00 0.00 8.15 60.01 14.43 36 E13a_E14a KnownJunction 0 25.41 3.29 26.79 31.26 27.59 10.45 2.25 30.81 92.10 42.36 7.32 13.05 20.78 66.57 18.91 69.55 136.61 0.00 0.00 0.00 13.41 38.94 39.01 37 I13 Intron 0 22.72 19.10 54.50 40.40 51.50 8.50 15.03 25.59 39.08 37.89 9.66 25.44 11.33 24.18 7.19 25.57 53.41 0.00 0.11 0.02 2.51 31.53 16.39 38 I13_AR1 ActiveIntronRegion 0 11.10 16.44 19.10 23.64 37.85 8.06 10.00 22.50 36.87 33.92 11.61 30.78 14.79 32.87 4.16 30.28 66.72 0.00 0.00 0.00 5.21 32.82 22.60 39 I13_AR2 ActiveIntronRegion 0 31.39 23.58 78.49 54.21 66.24 10.18 19.64 31.44 47.02 46.24 10.62 27.90 11.83 25.07 9.70 28.10 57.70 0.00 0.17 0.04 1.88 36.70 16.87 40 ER14a ExonRegion 0 13.06 8.70 30.41 26.85 35.09 9.89 10.19 36.38 84.37 34.46 8.77 11.66 7.94 30.02 9.02 42.90 103.00 0.00 0.00 0.00 10.25 34.84 36.24 41 E14a_E15a KnownJunction 1 14.08 5.85 21.58 23.74 38.12 13.91 12.23 32.69 87.27 38.87 7.48 0.00 6.82 15.36 0.00 3.42 68.54 0.00 0.00 0.00 2.53 32.33 28.17 42 I14_AR7 ActiveIntronRegion 0 1.64 0.15 1.41 1.13 2.07 0.00 0.76 0.00 0.71 1.98 0.75 7.18 7.46 11.44 4.09 14.01 17.85 0.00 0.00 0.00 0.00 2.75 1.13 43 ER15a ExonRegion 0 14.75 4.47 20.72 19.92 46.93 9.56 11.43 36.80 75.10 35.59 6.63 6.00 7.35 14.94 1.60 11.53 55.24 0.00 0.00 0.00 4.54 25.71 22.25 44 E15a_E16a KnownJunction 0 24.60 3.35 16.29 23.67 24.96 2.38 14.13 30.56 63.74 24.71 2.37 5.40 0.00 4.94 10.51 8.72 55.45 0.00 0.00 0.00 2.47 16.23 19.04 45 ER16a ExonRegion 0 16.12 6.31 27.50 24.49 31.08 6.94 8.67 36.07 75.26 39.52 5.64 1.46 5.30 14.01 2.33 13.64 52.97 0.00 0.00 0.00 5.50 21.81 13.12 46 E16a_E17a KnownJunction 0 28.75 0.00 32.76 23.71 41.60 35.04 13.34 35.36 86.83 53.19 7.63 0.00 0.00 21.43 0.00 12.05 46.38 0.00 0.00 0.00 5.81 22.35 19.04 47 ER17a ExonRegion 0 16.44 6.90 23.79 23.09 41.08 11.83 9.92 32.93 67.61 36.60 6.89 4.10 3.14 10.44 1.90 11.82 39.86 0.00 0.00 0.00 10.04 22.15 16.74 48 E17a_E18a KnownJunction 0 7.41 13.22 43.20 24.17 64.26 19.36 6.36 35.12 69.96 34.22 0.00 0.00 0.00 12.36 0.00 19.99 32.45 0.00 0.00 0.00 8.96 23.51 15.45 49 ER18a ExonRegion 0 9.74 2.71 30.05 21.13 33.26 12.91 6.80 35.64 83.23 39.60 7.57 4.00 1.79 12.05 0.99 16.11 24.65 0.00 0.00 0.00 14.67 16.03 18.74 50 E18a_E19a KnownJunction 0 6.30 3.35 46.75 31.63 23.85 2.56 1.90 32.04 67.53 35.67 4.74 5.40 0.00 2.83 0.00 7.26 26.55 0.00 0.00 0.00 5.99 19.35 12.04 51 ER19a ExonRegion 0 17.30 6.62 24.60 22.92 22.98 12.39 5.32 29.37 77.56 39.23 4.53 2.77 2.18 11.34 0.48 23.20 30.11 0.00 0.00 0.00 9.72 18.68 19.76 52 E19a_E20a KnownJunction 0 23.63 4.87 16.88 30.37 13.07 0.00 16.08 39.02 67.01 37.28 2.68 11.40 0.00 15.19 4.45 24.27 17.30 0.00 0.00 0.00 7.78 14.14 25.52 53 ER20a ExonRegion 0 20.55 9.83 22.90 30.50 30.43 12.40 11.11 28.49 65.23 39.87 4.24 3.41 0.00 13.36 2.90 25.78 45.14 0.00 0.00 0.00 7.82 28.37 22.14 54 E20a_E21a KnownJunction 0 41.93 15.13 18.86 37.59 65.53 52.92 12.41 28.46 84.20 40.19 10.11 0.00 0.00 12.42 0.00 20.34 46.00 0.00 0.00 0.00 11.68 35.21 30.90 55 ER21a ExonRegion 0 17.55 5.61 26.67 37.16 41.55 12.10 7.88 40.29 83.15 42.26 5.66 0.33 1.49 14.61 0.94 20.69 31.14 0.00 0.00 0.00 11.10 36.40 44.74 56 E21a_E22a KnownJunction 0 13.93 2.89 37.37 41.52 59.42 22.60 9.45 38.90 92.50 53.94 2.53 0.00 5.84 19.48 0.00 22.73 15.99 0.00 0.00 0.00 18.72 32.27 59.75 57 ER22a ExonRegion 0 11.12 13.26 38.65 36.19 30.28 18.69 10.05 55.58 108.75 50.29 6.35 4.20 5.03 17.05 1.30 12.13 38.80 0.00 0.00 0.00 16.39 47.90 51.39 58 E22a_E23a KnownJunction 0 23.93 20.19 52.60 44.02 70.37 30.44 20.58 57.13 111.23 54.23 6.79 6.30 6.17 4.89 0.00 22.99 38.90 0.00 0.00 0.00 8.90 73.42 56.34 59 ER23a ExonRegion 0 16.86 16.65 49.20 41.26 51.17 8.27 10.66 53.69 100.82 53.73 6.14 12.57 5.19 13.49 4.79 17.37 31.45 0.00 0.00 0.00 15.03 48.89 40.35 60 E23a_E24a KnownJunction 0 32.82 12.04 36.49 34.56 65.28 2.90 10.20 56.15 80.61 49.59 2.00 0.00 0.00 12.18 9.52 7.78 16.08 0.00 0.00 0.00 7.85 59.52 21.43 61 ER24a ExonRegion 0 24.45 16.60 28.37 43.67 44.70 9.53 14.92 52.52 81.86 51.53 2.95 3.59 5.78 11.11 4.71 15.60 36.16 0.00 0.00 0.00 6.87 40.44 24.25 62 E24a_E25a KnownJunction 0 30.08 12.70 16.20 31.46 45.84 0.00 12.76 66.29 79.34 59.42 2.53 0.00 5.84 4.77 0.00 12.39 21.97 0.00 0.00 0.00 5.62 39.80 30.56 63 ER25a ExonRegion 0 17.19 19.36 41.69 55.36 39.25 9.28 6.77 49.07 81.01 54.84 3.09 1.99 5.49 10.69 5.37 12.13 35.98 0.00 0.00 0.00 3.86 50.75 37.59 64 E25a_E26a KnownJunction 1 7.56 32.76 58.66 62.80 42.87 5.34 3.89 50.15 93.23 65.92 2.16 0.00 0.00 12.42 14.46 3.42 61.90 0.00 0.00 0.00 5.68 50.58 65.30 65 ER26a ExonRegion 0 16.51 15.35 63.77 75.37 62.63 17.21 10.30 58.57 117.64 62.07 2.99 6.33 0.53 12.24 7.80 16.74 38.02 0.00 0.00 0.00 9.81 65.95 40.70 66 E26a_E27a KnownJunction 0 55.05 33.88 94.56 120.60 52.80 44.01 10.55 79.48 136.63 67.50 7.79 6.30 6.33 14.54 10.75 28.45 46.00 0.00 0.00 0.00 8.65 102.26 56.08 67 ER27a ExonRegion 0 26.15 24.12 76.46 66.29 47.53 12.68 9.56 66.41 121.87 66.87 3.91 9.75 6.43 15.62 3.73 25.38 50.00 0.00 0.00 0.00 10.66 67.07 45.34 68 E27a_E28a KnownJunction 0 17.56 28.22 70.87 52.37 82.00 9.43 8.13 49.41 110.70 59.85 10.63 7.65 0.00 7.30 0.00 12.13 52.92 0.00 0.00 0.00 3.15 36.56 30.65 69 ER28a ExonRegion 0 36.78 18.88 67.44 54.05 60.38 19.18 20.00 65.27 95.95 75.82 2.93 12.73 6.57 17.04 2.46 26.47 70.17 0.00 0.00 0.00 13.92 54.39 32.30 70 E28a_E29a KnownJunction 1 23.93 0.00 85.07 45.52 65.11 17.55 11.22 56.31 90.28 80.24 0.00 37.66 6.82 18.89 0.00 16.41 37.59 0.00 0.00 0.00 9.27 56.64 42.94 71 ER29a ExonRegion 0 13.50 7.28 54.01 42.69 45.23 8.26 10.97 46.30 91.28 62.91 2.99 10.21 6.76 16.84 0.73 15.71 36.10 0.00 0.00 0.00 18.12 45.20 32.80 72 E29a_E30a KnownJunction 0 20.15 19.08 76.25 46.78 71.82 21.35 17.14 41.03 100.90 62.05 0.00 6.30 0.00 17.42 4.45 17.00 45.63 0.00 0.00 0.00 22.30 53.21 39.78 73 ER30a ExonRegion 0 52.58 22.80 84.96 83.80 93.15 19.17 16.73 57.19 77.05 57.25 3.62 3.60 3.14 10.46 2.74 10.90 20.85 0.09 0.11 0.40 6.32 32.69 24.15