Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MIPEP Gene 0 11.50 37.92 59.32 7.70 19.56 21.06 11.64 7.74 8.96 20.34 68.08 55.63 35.43 49.03 38.00 77.33 78.26 25.55 19.61 16.94 41.57 29.05 25.95 2 382172 Transcript 0 20.76 65.16 101.64 13.17 34.87 31.40 17.43 11.48 16.80 30.06 97.97 76.16 52.48 79.39 61.96 135.82 116.03 36.12 31.32 26.81 58.66 44.24 38.27 3 469167 Transcript 0 0.59 2.51 1.13 0.77 0.29 1.13 2.53 0.43 0.00 1.50 1.31 1.13 0.02 1.20 3.15 2.42 4.99 4.20 1.06 0.76 6.25 0.59 1.71 4 494139 Transcript 0 0.18 1.71 1.24 0.17 0.91 0.00 0.56 0.66 0.00 0.44 3.19 0.00 2.44 0.11 5.28 1.77 1.67 1.30 0.00 0.18 0.56 2.13 2.78 5 382155 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 433710 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 464194 Transcript 0 2.57 3.15 4.39 1.02 4.28 0.54 2.64 0.08 0.94 2.24 0.64 3.58 2.93 1.45 0.89 2.75 2.96 0.23 0.07 0.19 2.22 1.77 0.79 8 ER1a ExonRegion 0 0.00 0.18 0.00 0.00 0.00 16.59 1.38 0.00 0.00 1.51 9.14 0.00 0.00 2.58 6.99 18.78 6.00 0.00 2.61 1.74 10.82 2.46 0.80 9 ER1b ExonRegion 0 0.76 5.96 5.71 2.20 3.08 21.05 3.03 1.60 1.68 6.36 38.33 8.02 6.37 29.10 19.47 48.18 51.67 15.10 18.38 9.44 37.90 16.39 13.40 10 E1_Da KnownBoundary 0 0.00 0.00 5.97 1.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.47 0.00 11.62 4.11 15.30 9.22 3.26 0.00 0.00 7.51 11 E1a_E2a KnownJunction 0 0.00 16.44 4.76 3.46 12.82 21.46 2.16 8.83 3.41 6.77 34.75 12.15 21.75 55.33 42.03 121.68 59.93 26.12 44.99 11.25 52.70 29.21 28.51 12 ER1c ExonRegion 0 1.19 1.99 2.25 1.53 0.58 2.27 1.34 0.87 0.00 2.99 2.61 2.26 0.04 2.41 1.84 4.84 5.77 8.40 2.13 1.53 7.01 1.17 3.42 13 E1b_E2a KnownJunction 0 0.00 3.03 0.00 0.00 0.00 0.00 3.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 4.21 0.00 0.00 0.00 5.50 0.00 0.00 14 ER2a ExonRegion 0 8.42 21.14 71.28 6.56 12.92 33.60 17.90 5.99 12.49 35.04 73.32 33.64 35.28 74.77 39.03 81.63 103.26 74.66 31.10 24.58 83.72 33.78 40.59 15 E2a_E3a KnownJunction 1 3.78 16.31 56.47 3.63 12.39 10.56 11.00 8.42 11.08 32.66 48.75 35.41 33.76 79.52 40.05 39.90 126.98 40.58 27.48 14.19 60.67 39.92 68.89 16 ER3a ExonRegion 1 9.87 21.68 54.56 8.94 12.30 19.95 8.06 10.55 14.99 26.24 78.90 49.81 48.48 86.81 25.69 84.92 124.47 43.39 20.33 28.69 87.11 43.12 37.81 17 E3_Da NovelBoundary 0 21.86 3.35 6.36 1.70 3.82 2.27 2.25 2.22 1.45 4.38 2.05 0.00 0.00 0.00 0.00 6.32 16.46 3.81 4.42 6.01 3.15 0.00 3.50 18 E3a_E4a KnownJunction 1 12.59 25.78 62.48 11.49 34.21 29.64 6.23 11.87 22.57 36.26 108.50 43.96 25.00 116.08 39.43 141.07 146.70 40.79 21.37 33.11 50.84 52.54 39.69 19 ER4a ExonRegion 0 8.73 39.08 64.92 8.63 32.75 21.31 15.96 11.09 15.93 36.78 100.24 70.02 55.58 81.84 50.32 85.99 130.78 39.23 23.25 27.76 48.56 56.85 36.22 20 E4a_E5a KnownJunction 0 22.67 61.90 56.30 8.02 29.88 26.01 26.41 10.56 15.10 28.55 91.55 100.68 81.00 63.10 40.42 74.34 122.58 16.66 12.42 37.90 50.23 58.60 45.58 21 ER5a ExonRegion 0 7.47 36.54 48.44 8.16 22.74 30.23 11.67 12.91 16.75 24.95 97.97 121.83 73.79 70.98 28.70 105.14 126.00 22.72 5.82 27.33 27.51 45.28 38.50 22 E5a_E6a KnownJunction 0 7.41 20.98 67.44 12.35 63.16 39.13 6.09 20.00 24.57 18.72 107.13 138.95 73.37 121.61 54.64 116.38 141.75 16.08 22.59 16.17 31.01 73.85 39.35 23 ER6a ExonRegion 0 16.12 49.33 72.27 9.49 31.29 30.98 18.73 14.46 15.77 31.19 128.71 153.94 82.55 84.61 41.98 92.31 140.44 22.43 20.30 27.69 35.43 68.81 36.59 24 E6a_E7a KnownJunction 0 33.04 116.16 71.11 7.69 57.64 41.96 26.59 6.16 8.07 45.91 133.98 203.17 90.90 109.31 42.77 105.61 136.14 19.11 21.65 13.81 48.68 107.53 54.12 25 ER7a ExonRegion 0 20.49 82.07 81.21 10.63 39.16 39.00 22.28 10.40 11.26 47.06 134.59 159.14 78.48 81.11 43.24 122.61 140.87 24.36 34.02 23.70 57.55 59.82 69.60 26 E7a_E8a KnownJunction 0 20.60 120.44 80.13 13.05 33.87 42.42 24.11 11.25 10.13 53.94 160.46 135.94 105.67 97.42 54.39 96.04 152.50 21.43 35.48 20.33 40.96 84.26 73.67 27 ER8a ExonRegion 0 14.73 89.23 76.45 10.96 37.19 32.82 25.05 13.30 11.24 42.72 129.90 160.54 106.05 85.45 61.64 88.44 173.53 22.47 23.27 22.49 66.88 55.74 45.49 28 E8a_E9a KnownJunction 1 15.63 111.10 76.11 13.62 52.29 28.56 49.46 12.16 17.56 23.10 91.65 178.26 132.78 101.83 53.53 93.14 189.15 13.76 12.80 37.01 75.55 51.01 39.95 29 ER9a ExonRegion 0 16.59 86.61 82.26 10.95 38.29 41.94 28.15 15.30 11.95 28.48 119.08 176.09 84.96 103.62 57.41 117.96 152.38 32.65 33.52 31.50 66.29 54.72 54.54 30 E9a_E10a KnownJunction 0 10.22 100.90 66.47 10.79 38.96 47.02 27.91 14.13 7.81 27.10 150.46 212.47 98.69 98.59 71.20 212.59 168.02 33.49 75.20 31.26 68.45 76.05 101.07 31 E9a_E12a NovelJunction 0 0.00 28.74 63.27 1.53 0.00 2.78 3.97 2.26 5.67 10.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 4.80 0.00 0.00 0.00 0.00 32 ER10a ExonRegion 0 23.52 100.34 71.86 10.98 38.47 22.84 17.09 16.93 10.39 23.07 123.45 146.47 91.85 76.73 49.38 146.48 154.39 25.83 48.32 24.49 67.28 54.88 61.06 33 E10a_E11a KnownJunction 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.47 0.00 0.00 0.00 8.90 0.00 0.00 1.91 0.00 0.00 0.00 3.06 3.67 34 E10a_E12a KnownJunction 0 43.42 135.50 71.05 8.76 40.58 18.17 22.52 12.73 12.96 20.47 109.71 128.14 99.99 97.59 72.44 173.29 169.33 21.76 53.55 23.52 63.32 58.23 57.02 35 I10_AR5 ActiveIntronRegion 0 0.00 1.06 0.68 0.00 0.00 0.26 0.38 0.73 0.18 0.40 0.28 0.59 0.59 0.19 1.13 18.02 7.85 3.12 0.91 0.85 1.61 0.00 3.72 36 ER11a ExonRegion 0 0.36 0.45 2.48 0.35 1.82 0.00 1.13 1.31 0.00 0.87 1.90 0.00 4.88 0.23 1.66 3.54 3.33 0.69 0.00 0.36 1.12 1.19 1.88 37 ER12a ExonRegion 0 25.65 110.72 130.24 13.64 48.96 34.57 26.91 13.50 17.45 34.03 94.91 140.82 74.46 100.10 65.50 141.00 130.34 24.19 25.94 27.69 69.59 50.44 32.13 38 E12a_E13a KnownJunction 0 10.22 87.48 213.42 16.51 33.45 26.92 26.72 12.98 30.21 49.67 72.60 113.59 53.08 68.40 45.00 111.59 102.10 35.44 27.95 29.08 59.55 47.15 33.72 39 ER13a ExonRegion 0 30.74 96.52 184.87 19.29 35.06 34.47 17.74 9.46 24.04 36.13 112.26 93.36 59.23 104.21 86.11 185.38 157.68 49.27 48.15 29.24 68.54 44.42 53.95 40 E13a_E14a KnownJunction 0 41.71 101.56 135.12 22.21 48.73 32.82 20.45 5.91 16.90 33.34 117.82 87.63 41.39 132.03 54.39 152.27 128.85 62.18 22.21 22.43 72.65 35.21 35.25 41 ER14a ExonRegion 0 30.43 99.48 128.97 13.17 41.62 38.44 22.89 9.59 15.68 28.42 132.25 84.82 67.72 95.20 78.65 149.01 139.33 62.11 45.25 31.85 76.91 46.28 48.23 42 E14a_E15a KnownJunction 0 28.15 110.90 118.09 17.25 34.97 44.01 15.90 6.16 16.41 31.51 89.23 53.42 54.22 83.82 75.90 132.79 123.14 57.83 66.64 33.56 65.67 49.84 54.38 43 ER15a ExonRegion 0 17.97 71.80 120.63 16.43 46.46 38.48 22.62 14.44 15.82 32.49 119.86 96.67 69.75 92.62 73.30 145.28 134.44 41.34 36.54 26.58 72.08 43.91 41.41 44 E15a_E16a KnownJunction 0 28.15 43.35 129.50 23.41 18.59 21.29 10.11 12.86 22.31 27.13 54.91 31.96 21.26 36.38 60.45 163.46 92.57 25.99 29.93 32.79 36.26 38.58 26.46 45 ER16a ExonRegion 0 21.19 55.18 114.76 12.41 33.04 45.62 21.02 10.12 16.62 40.42 118.58 61.48 42.21 69.45 81.43 154.31 104.75 43.02 44.98 31.69 60.85 44.95 45.58 46 E16a_E17a KnownJunction 1 31.56 70.45 147.75 12.62 66.04 45.83 38.55 11.42 28.73 46.66 145.35 24.01 67.53 76.34 78.99 153.46 100.33 56.09 56.66 38.35 101.62 42.13 49.68 47 ER17a ExonRegion 0 25.87 60.11 122.78 20.27 38.60 44.07 22.75 16.82 12.62 44.74 132.77 71.26 38.89 72.53 87.59 179.99 122.60 42.44 23.20 26.13 73.57 36.04 27.51 48 E17a_E19a KnownJunction 1 21.34 59.13 111.35 15.28 15.79 18.91 10.42 18.36 7.87 22.59 109.87 48.47 29.38 47.68 116.94 211.23 81.44 39.21 12.42 28.00 80.99 28.84 31.33 49 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER19a ExonRegion 0 19.29 47.84 106.59 14.76 24.52 28.24 13.14 13.46 13.22 30.51 98.20 55.86 21.95 67.57 87.01 163.49 100.22 43.36 25.51 33.76 76.53 32.11 38.83 52 E19a_E20b KnownJunction 0 12.52 29.93 109.52 7.36 27.08 22.60 18.86 18.52 12.56 23.99 109.03 19.96 25.16 42.62 80.35 130.31 98.83 48.58 17.88 34.52 69.31 32.21 15.54 53 ER20a ExonRegion 0 2.57 3.15 4.39 1.02 4.28 0.54 2.64 0.08 0.94 2.24 0.64 3.58 2.93 1.45 0.89 2.75 2.96 0.23 0.07 0.19 2.22 1.77 0.79 54 E20_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 7.13 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 2.76 0.00 55 ER20b ExonRegion 1 12.64 34.82 95.98 15.35 21.99 26.68 16.94 17.24 12.38 21.78 85.60 26.57 37.33 39.42 82.11 110.46 70.72 35.26 17.72 21.04 61.16 27.43 15.65 56 E20a_E23a KnownJunction 0 19.56 25.13 114.48 20.01 33.96 25.27 18.90 16.14 11.69 24.50 81.81 31.51 37.17 35.20 68.24 61.10 82.19 33.62 16.94 15.40 64.25 22.78 22.96 57 ER21a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER22a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 I22_SR4 SilentIntronRegion 0 12.45 8.11 2.75 4.28 5.72 2.17 2.91 3.74 1.84 1.09 1.24 0.00 2.29 0.00 0.00 1.76 0.00 1.96 0.00 0.00 0.00 5.72 0.00 60 I22_AR4 ActiveIntronRegion 0 13.45 7.97 6.72 4.59 8.45 1.42 4.16 0.85 2.70 2.19 4.23 1.85 2.82 0.87 2.34 4.62 1.71 1.36 0.00 1.65 3.42 3.07 1.90 61 ER23a ExonRegion 0 11.50 25.51 70.45 8.24 13.72 10.32 4.52 11.10 11.65 14.44 62.14 20.06 18.41 24.15 42.66 54.93 52.88 18.68 21.89 14.46 28.37 26.19 19.03