Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FBRSL1 Gene 0 70.75 116.98 178.32 128.29 71.96 173.79 79.06 103.32 137.29 187.61 126.22 49.13 61.25 124.75 86.14 67.84 60.75 131.31 108.19 87.62 95.25 74.97 78.98 2 261673 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 434748 Transcript 0 83.77 150.56 120.29 133.74 88.46 155.44 73.24 73.20 97.86 109.78 49.62 24.65 23.33 47.56 38.67 31.13 25.33 42.68 66.67 51.67 48.83 55.26 50.05 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.41 0.48 5.80 0.36 0.00 0.00 0.48 0.00 0.55 0.15 0.53 0.35 5.33 0.00 0.00 5 ER1b ExonRegion 0 0.80 0.45 2.88 0.70 1.17 4.50 2.00 3.87 1.82 6.83 13.50 0.26 1.60 14.79 12.79 4.84 10.28 5.62 12.29 5.24 28.05 1.88 16.98 6 E1_Ab KnownBoundary 0 26.38 9.14 54.34 18.71 8.57 58.38 25.92 67.94 35.18 80.56 45.64 12.45 13.80 102.54 95.19 30.59 26.09 28.02 43.30 49.66 59.37 28.17 49.60 7 ER1c ExonRegion 0 6.56 14.68 55.43 21.00 6.35 43.02 27.11 69.61 48.96 107.11 59.33 24.58 12.00 116.85 88.22 43.47 70.55 54.40 77.80 37.18 72.98 36.06 59.33 8 E1b_E2a KnownJunction 0 3.04 5.79 76.70 34.96 11.63 44.12 28.04 84.53 86.43 145.40 97.45 23.26 32.14 133.50 69.35 82.88 95.84 98.99 117.27 32.92 63.26 49.42 62.66 9 ER2a ExonRegion 0 18.76 18.75 105.80 58.65 13.23 76.40 38.88 127.39 129.39 227.68 144.99 28.91 39.68 184.09 122.16 73.37 130.39 131.14 130.25 66.40 140.94 82.36 99.19 10 E2a_E3a KnownJunction 1 9.71 20.92 96.15 70.42 31.32 114.59 44.07 167.29 194.73 258.22 104.71 11.85 13.64 119.90 100.75 71.35 88.08 139.74 121.42 65.45 159.45 81.81 122.50 11 I2_AR1 ActiveIntronRegion 1 23.89 16.27 71.71 17.68 16.34 25.86 23.68 23.68 15.51 64.23 62.85 17.68 16.32 91.69 67.59 44.16 44.64 62.31 51.74 20.16 18.92 21.12 17.96 12 ER3a ExonRegion 0 5.74 13.44 82.77 70.08 26.25 139.90 47.54 148.34 177.25 224.55 97.14 33.53 49.40 114.09 98.71 73.21 87.73 122.79 91.95 64.00 153.04 88.34 110.58 13 E3a_E4a KnownJunction 0 3.78 13.09 83.08 96.62 28.10 101.76 49.86 158.01 176.01 238.05 87.34 11.70 33.28 101.30 97.04 51.61 107.62 119.59 69.84 75.10 122.88 86.58 118.40 14 ER4a ExonRegion 1 5.47 9.21 75.36 71.44 15.24 68.92 39.98 122.43 148.76 202.97 88.27 9.50 29.31 90.73 82.77 41.11 83.16 70.68 66.10 57.92 131.79 95.44 103.68 15 E4a_E5a KnownJunction 0 6.74 3.09 62.68 58.17 19.44 66.04 35.68 88.68 87.64 150.56 60.59 11.55 33.93 94.65 80.85 38.37 72.56 81.50 90.07 38.67 121.21 96.32 115.67 16 E5a_E6a KnownJunction 0 14.08 8.49 76.76 62.86 16.30 71.21 17.44 138.87 167.16 189.99 95.97 56.12 99.83 143.09 99.76 62.04 110.61 91.20 113.51 46.47 152.65 100.91 129.33 17 ER5a ExonRegion 0 10.94 5.83 85.00 66.65 13.20 60.70 21.49 139.03 160.56 217.41 90.40 36.37 78.32 118.34 83.65 52.51 84.06 85.61 98.43 43.69 142.21 97.51 111.20 18 I5_AR2 ActiveIntronRegion 0 11.27 6.75 25.34 10.93 4.72 10.73 22.33 7.34 8.30 25.88 10.44 1.83 2.63 10.76 14.16 6.58 10.75 21.37 14.53 12.52 13.36 7.48 17.89 19 I5_SR3 SilentIntronRegion 0 7.07 2.37 8.65 7.41 4.04 9.74 10.65 9.26 8.30 15.81 3.61 2.38 3.30 4.46 7.05 5.88 8.10 12.90 14.17 10.22 12.37 8.94 16.86 20 I5_AR3 ActiveIntronRegion 0 8.47 2.61 15.58 5.65 4.20 11.00 7.38 5.19 8.29 11.63 0.00 0.00 0.00 6.50 6.63 2.12 2.83 18.74 7.74 10.03 19.52 8.33 24.75 21 I5_AR4 ActiveIntronRegion 0 11.40 3.60 13.29 6.81 2.68 10.72 7.43 5.19 7.41 10.94 0.89 0.00 4.69 4.87 7.81 0.00 3.30 15.63 8.82 8.02 15.93 8.01 16.72 22 I5_AR9 ActiveIntronRegion 1 5.18 7.36 12.88 2.26 7.34 38.59 31.82 4.87 3.74 14.48 32.86 5.16 0.80 25.90 11.30 7.56 4.78 54.78 19.86 23.34 7.08 3.01 2.12 23 I5_AR10 ActiveIntronRegion 1 0.00 1.14 17.94 3.37 2.86 17.29 7.69 2.91 7.19 10.37 34.08 8.61 12.81 20.26 7.50 1.80 8.53 17.77 21.37 11.55 9.71 1.52 0.92 24 I5_AR11 ActiveIntronRegion 0 20.40 4.22 23.24 20.63 4.46 15.81 18.03 9.86 15.09 23.21 7.52 7.92 11.16 7.76 9.23 7.95 6.98 24.07 17.46 19.25 21.18 17.64 23.52 25 I5_AR12 ActiveIntronRegion 0 23.94 9.36 10.50 21.80 9.23 23.56 13.45 14.82 14.83 14.42 5.56 5.37 4.60 8.21 7.10 7.41 5.06 19.20 14.65 7.75 16.88 23.17 15.77 26 I5_SR7 SilentIntronRegion 0 10.28 2.47 27.12 18.02 3.74 19.87 8.04 17.57 18.57 24.74 7.58 0.95 3.32 5.58 8.67 7.77 6.47 28.57 16.07 10.73 10.91 12.84 17.83 27 ER6a ExonRegion 0 16.52 14.06 126.59 69.33 11.63 78.30 25.96 156.50 195.90 287.92 176.82 71.72 92.07 253.36 140.33 99.11 113.24 171.72 208.71 76.32 173.61 108.61 130.30 28 E6a_E7a KnownJunction 0 20.97 26.25 172.79 64.96 12.14 75.24 46.86 136.69 235.99 324.17 224.79 91.98 60.06 209.72 154.77 157.91 100.98 247.77 214.50 102.27 188.79 79.24 136.92 29 E7_Aa NovelBoundary 0 0.00 0.00 2.69 14.62 0.00 8.57 5.83 9.94 11.98 9.11 12.79 0.00 7.63 11.71 0.00 16.92 8.70 39.75 12.33 8.69 11.86 8.70 10.50 30 ER7a ExonRegion 0 17.95 17.95 113.57 44.04 18.85 100.84 41.94 76.42 113.62 204.63 157.75 55.02 81.16 153.65 94.33 57.58 71.35 139.86 96.82 81.83 142.49 54.75 75.77 31 E7a_E8a KnownJunction 0 20.23 12.43 146.30 35.26 27.50 92.28 36.26 63.54 123.55 213.34 110.19 24.16 29.38 67.63 43.27 15.81 35.81 87.09 35.20 82.26 117.01 30.98 18.78 32 ER8a ExonRegion 0 23.13 37.61 195.02 56.31 12.85 98.47 47.05 76.07 136.89 225.43 184.78 89.38 108.17 209.06 131.43 62.96 75.94 185.67 119.98 119.01 127.83 59.65 62.72 33 E8_Da NovelBoundary 0 0.00 0.00 16.59 2.06 0.00 16.87 0.00 9.61 8.80 19.31 4.63 0.00 0.00 9.54 0.00 7.35 12.90 38.55 13.84 12.53 2.84 8.02 0.00 34 E8a_E9a KnownJunction 0 0.00 6.25 101.36 16.75 0.00 52.07 15.72 37.05 70.89 120.83 97.39 42.31 19.64 49.80 50.56 12.99 38.06 74.66 37.65 33.94 64.68 13.04 7.94 35 I8 Intron 0 8.61 7.85 36.75 24.78 7.56 34.63 21.26 25.92 35.89 53.23 37.69 18.27 22.61 53.81 32.80 20.07 17.29 65.45 39.73 42.38 30.97 22.83 27.12 36 I8_SR1 SilentIntronRegion 1 8.63 7.87 36.85 24.84 7.58 34.72 21.32 25.99 35.99 53.38 37.80 18.32 22.67 53.96 32.89 20.13 17.34 65.63 39.84 42.49 31.06 22.89 27.19 37 E9_Aa NovelBoundary 0 14.45 11.84 95.44 39.42 24.79 61.21 10.11 64.73 142.79 129.37 115.56 43.21 52.27 103.07 56.62 24.61 44.51 78.84 58.26 121.83 113.73 45.93 57.53 38 ER9a ExonRegion 0 39.59 24.57 108.56 48.86 27.75 131.09 45.76 61.64 113.34 139.27 158.50 91.47 152.66 149.45 110.63 54.14 59.19 137.15 95.47 105.36 106.77 59.50 86.82 39 E9a_E10a KnownJunction 0 23.71 22.69 115.55 26.97 11.63 109.99 33.56 40.54 62.85 85.18 65.44 42.76 74.83 81.17 44.01 35.20 38.90 33.54 25.79 35.15 63.82 33.74 47.04 40 I9 Intron 1 15.27 13.35 49.78 26.81 11.58 36.11 18.72 33.63 38.09 57.19 41.42 12.00 8.36 52.87 37.94 29.16 22.14 63.00 31.94 44.66 33.06 23.30 26.68 41 I9_SR1 SilentIntronRegion 1 15.34 11.35 50.40 23.86 8.82 24.79 10.29 32.54 31.29 57.66 40.94 12.41 8.82 44.55 30.95 28.01 21.58 55.14 23.26 41.30 28.82 15.60 23.63 42 I9_AR1 ActiveIntronRegion 1 15.28 15.54 49.42 30.08 14.56 48.27 27.73 34.97 45.49 57.02 42.16 11.63 7.92 61.97 45.53 30.54 22.86 71.66 41.30 48.47 37.73 31.56 30.06 43 E10_Aa NovelBoundary 1 99.13 57.56 112.41 74.08 37.27 116.41 76.67 84.57 71.87 115.69 99.81 11.85 12.99 107.25 47.84 35.89 34.78 102.76 82.26 77.53 54.24 59.76 50.28 44 ER10a ExonRegion 0 108.69 86.80 215.56 87.87 50.04 167.84 92.14 107.44 134.82 245.22 162.53 104.97 130.17 163.95 114.93 60.17 83.68 180.76 82.60 105.82 131.37 76.10 66.72 45 E10a_E11a KnownJunction 0 142.77 145.43 447.06 208.07 109.08 281.03 160.09 266.90 261.08 506.29 265.38 125.59 143.17 238.74 176.40 141.07 127.35 561.36 265.70 163.69 177.49 122.59 112.08 46 E11_Aa NovelBoundary 0 11.11 0.00 18.80 12.95 8.23 8.01 10.29 15.69 24.45 21.38 16.53 5.25 6.33 14.54 27.44 19.82 0.00 40.87 8.85 5.50 8.28 11.08 15.79 47 ER11a ExonRegion 0 64.66 86.26 221.47 104.69 57.92 208.77 113.50 135.11 143.89 255.21 233.40 104.09 140.16 213.86 140.77 143.87 92.36 283.94 192.91 152.35 116.41 123.04 142.18 48 E11a_E12a KnownJunction 0 10.82 5.59 20.61 27.37 0.00 29.36 8.44 22.34 18.34 35.19 4.21 5.55 14.12 0.00 4.45 3.85 9.16 11.61 9.22 8.69 7.78 8.14 3.76 49 I11_AR1 ActiveIntronRegion 0 15.12 29.21 56.35 20.96 17.45 117.68 65.01 15.03 23.18 37.47 73.59 61.49 51.45 114.14 75.39 47.81 40.76 48.23 48.84 67.28 67.10 35.63 62.31 50 ER12a ExonRegion 0 14.59 24.31 88.00 53.36 17.86 68.06 38.85 44.12 53.95 83.57 76.21 36.01 58.26 75.83 46.09 65.00 32.51 103.22 69.35 51.82 42.00 36.03 63.47 51 E12_Da NovelBoundary 0 9.11 0.00 9.61 10.92 0.00 4.94 13.43 11.42 15.45 7.55 4.47 0.00 0.00 2.35 4.45 3.67 3.83 40.71 0.00 14.38 3.15 2.51 7.77 52 E12a_E13a KnownJunction 0 60.75 118.47 517.66 307.35 112.31 395.85 197.72 268.34 309.00 499.87 337.19 158.60 225.80 360.00 284.69 230.20 140.91 468.13 315.11 254.97 184.10 230.48 218.10 53 I12 Intron 0 8.31 7.47 14.47 13.80 8.56 19.80 16.36 11.24 14.58 16.53 6.32 4.56 3.27 8.61 9.70 8.86 3.24 44.10 13.66 22.12 5.93 4.39 7.58 54 I12_SR1 SilentIntronRegion 0 8.32 7.48 14.49 13.82 8.57 19.83 16.39 11.25 14.61 16.55 6.33 4.57 3.27 8.62 9.71 8.87 3.24 44.17 13.68 22.15 5.94 4.40 7.59 55 E13_Aa NovelBoundary 0 13.78 40.78 9.28 24.81 73.85 79.84 85.50 14.83 23.47 23.37 15.58 6.30 6.82 9.89 8.78 12.99 4.77 87.59 24.66 19.62 4.94 13.96 16.56 56 ER13a ExonRegion 0 84.42 107.44 476.63 235.17 73.07 243.85 160.41 247.73 313.28 437.29 352.47 116.77 170.43 320.76 222.02 208.03 156.23 475.94 221.92 241.93 232.85 172.81 191.15 57 E13_Da NovelBoundary 0 0.00 18.75 11.95 28.87 3.90 14.93 9.98 16.02 30.64 34.33 26.32 12.00 12.99 25.78 23.24 11.19 12.90 77.19 31.06 53.88 11.00 22.11 19.80 58 E13a_E14a KnownJunction 0 150.17 92.68 505.33 227.74 84.38 291.59 151.96 202.58 269.21 364.97 298.13 135.34 103.08 267.00 160.33 257.11 134.83 390.33 391.54 178.90 159.20 178.62 210.16 59 I13 Intron 0 15.63 18.95 49.76 43.43 15.31 51.40 29.56 26.04 36.45 44.58 21.47 11.27 12.76 22.59 14.13 15.95 12.29 80.30 31.34 35.50 16.64 15.65 15.83 60 I13_SR1 SilentIntronRegion 0 9.51 12.66 24.87 24.48 11.29 39.27 23.58 17.50 25.12 29.60 14.75 10.40 11.23 19.15 11.97 11.13 10.28 61.09 26.91 32.59 15.85 10.77 12.48 61 I13_AR1 ActiveIntronRegion 1 32.13 35.57 106.68 88.46 23.91 81.86 44.33 46.19 61.09 75.61 33.78 12.38 13.82 30.07 18.84 29.27 16.65 123.12 40.42 39.49 17.22 28.97 24.19 62 I13_SR2 SilentIntronRegion 1 21.20 26.39 118.16 87.99 29.11 72.97 41.46 46.82 73.42 100.37 53.82 17.81 27.93 33.96 21.25 19.13 19.04 138.60 48.57 55.77 24.51 19.50 21.90 63 E14_Aa NovelBoundary 0 51.79 42.30 154.67 115.20 14.18 167.29 89.96 89.99 110.24 138.66 42.43 12.30 6.17 36.97 54.39 42.72 12.16 197.15 79.25 75.42 19.03 16.59 26.89 64 ER14a ExonRegion 0 127.13 140.26 572.74 303.07 110.43 386.67 190.92 221.22 269.76 397.55 353.57 120.00 200.89 377.09 254.75 225.42 142.57 468.33 320.21 236.06 195.79 180.76 199.43 65 E14_Da NovelBoundary 0 3.04 3.35 44.03 22.81 0.00 15.10 6.76 10.93 20.08 12.71 4.84 0.00 14.61 6.71 0.00 16.49 3.55 40.91 4.80 20.39 8.59 11.08 11.87 66 E14a_E15a KnownJunction 1 173.14 196.74 482.95 306.19 163.58 451.61 274.43 210.55 213.97 320.01 321.82 124.09 327.25 418.10 326.23 178.50 145.68 337.26 239.44 239.82 190.52 144.57 184.73 67 E14a_E16a NovelJunction 0 7.19 9.60 68.66 41.45 0.00 16.18 8.70 51.38 31.28 63.37 11.48 0.00 0.00 12.24 0.00 7.86 4.77 27.07 9.04 5.69 0.00 0.00 20.74 68 ER15a ExonRegion 0 42.94 71.88 285.06 125.32 57.21 212.94 89.38 100.74 124.57 209.76 219.11 87.93 130.71 241.92 174.42 110.15 90.11 202.33 166.66 116.46 125.24 110.75 90.06 69 E15a_E16a KnownJunction 0 69.64 94.72 345.85 152.59 69.27 237.53 120.08 143.06 192.74 267.03 211.79 95.43 105.67 213.43 168.98 138.08 105.10 347.55 245.47 184.27 91.92 92.71 172.09 70 E16_Aa NovelBoundary 0 7.33 0.00 9.99 6.43 3.14 16.92 0.00 16.43 5.44 20.58 10.32 0.00 5.84 9.59 9.52 0.00 0.00 38.80 14.21 11.57 5.99 2.57 11.27 71 ER16a ExonRegion 0 25.08 50.32 382.10 144.13 42.76 196.99 77.73 141.05 194.76 310.93 207.95 60.23 71.91 240.10 151.12 134.53 103.62 265.72 153.38 147.35 127.08 89.25 104.89 72 E16_Da NovelBoundary 0 10.89 6.58 23.27 16.08 3.31 41.57 8.08 15.24 8.36 26.94 11.32 6.30 21.26 12.42 20.27 16.32 9.54 37.85 17.04 5.62 7.97 5.88 20.23 73 E16a_E17a KnownJunction 0 28.67 60.45 410.07 175.67 47.62 255.08 68.89 191.57 305.41 428.31 197.79 55.67 47.24 282.48 170.84 147.23 91.54 411.63 278.88 102.08 135.17 138.39 103.37 74 ER17a ExonRegion 1 19.69 27.27 83.35 26.35 16.49 88.75 25.33 48.24 62.39 101.69 107.23 17.49 16.74 79.54 49.77 45.66 43.28 103.42 60.35 41.71 73.42 21.64 41.11 75 E17_Da KnownBoundary 0 176.33 203.85 153.45 77.38 36.59 115.84 107.80 129.59 137.93 169.69 59.28 17.41 6.01 49.09 54.76 56.99 30.57 117.85 124.62 64.36 50.53 88.60 37.05 76 ER17b ExonRegion 0 166.74 300.67 237.70 266.79 175.75 306.37 144.47 142.53 193.91 212.72 85.75 49.04 45.06 80.32 64.55 57.41 40.38 79.73 121.04 98.11 69.61 108.64 83.13