Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GTF2H3 Gene 0 43.13 142.67 61.11 105.77 143.32 85.34 121.52 69.35 76.64 100.35 200.02 368.11 370.13 286.18 142.73 184.31 177.37 64.61 74.35 115.36 87.96 104.90 63.35 2 228955 Transcript 0 50.83 146.22 54.89 87.15 135.75 89.24 123.05 65.33 72.73 86.93 243.75 355.66 321.78 309.54 143.43 250.83 225.23 89.89 88.61 139.52 122.03 107.69 80.17 3 ER1a ExonRegion 1 43.28 149.72 20.28 30.60 103.48 125.66 102.74 20.35 30.41 37.93 182.90 7.25 15.01 170.21 104.37 255.38 169.42 73.86 98.11 109.25 85.28 80.32 69.16 4 E1_Da NovelBoundary 0 22.52 13.02 4.73 14.55 38.79 16.41 19.39 9.24 5.03 7.98 2.68 0.00 0.00 0.00 32.76 47.68 18.70 11.15 41.98 9.08 6.05 3.12 37.30 5 E1a_E2a KnownJunction 1 132.25 433.08 49.17 77.25 301.44 324.81 295.27 50.03 66.32 100.76 427.69 18.46 39.77 388.02 218.06 607.96 388.31 166.85 224.38 277.27 193.42 210.03 176.96 6 E1a_E3a NovelJunction 0 17.63 58.48 1.83 9.02 37.86 18.34 27.47 4.64 7.29 8.52 46.43 0.00 0.00 12.01 24.85 37.08 31.60 27.32 18.64 43.14 32.99 8.82 12.21 7 ER2a ExonRegion 0 42.28 108.64 37.76 55.96 88.00 103.17 83.82 38.93 63.96 68.93 178.55 88.05 105.47 116.37 61.72 241.63 160.38 88.88 84.45 106.49 87.05 61.85 72.35 8 E2a_E3a KnownJunction 1 11.19 30.98 41.48 11.32 39.56 7.67 43.37 24.60 26.27 45.05 141.46 151.70 149.99 63.69 51.05 47.17 108.56 16.54 32.19 67.43 64.68 16.84 0.00 9 ER3a ExonRegion 0 4.51 34.49 53.09 69.70 21.88 11.24 25.80 55.71 59.99 99.31 299.89 194.62 119.31 235.30 103.85 160.02 253.21 62.50 78.80 157.45 149.69 92.59 58.76 10 E3a_E4a KnownJunction 1 10.52 49.53 79.74 116.70 51.78 17.66 40.54 65.27 100.98 100.03 146.14 292.15 173.69 290.54 185.80 424.93 106.03 133.02 160.48 208.37 121.52 160.06 168.68 11 ER4a ExonRegion 0 28.13 118.28 47.77 96.13 160.28 131.53 130.05 64.71 77.44 85.17 245.50 308.55 249.43 270.16 111.24 222.46 186.80 87.86 71.96 128.63 111.61 92.06 76.89 12 E4a_E5a KnownJunction 0 79.64 293.63 40.48 95.63 65.45 54.23 132.05 72.99 97.22 104.01 284.34 476.26 392.34 323.03 150.07 177.73 262.37 60.23 83.96 142.98 84.33 112.30 68.72 13 ER5a ExonRegion 0 81.84 221.56 44.02 90.86 95.39 76.12 125.31 68.53 80.42 86.67 264.50 463.53 316.17 351.40 129.41 229.09 229.02 86.58 81.45 128.84 96.61 122.17 80.78 14 E5a_E6a KnownJunction 0 73.57 167.93 36.16 75.28 132.94 110.39 135.67 46.95 62.70 63.66 220.00 379.47 222.06 285.01 116.94 188.50 202.34 70.47 54.12 129.18 71.35 88.79 49.43 15 E6a_E7a KnownJunction 0 37.41 101.76 32.79 53.57 167.83 101.99 99.28 45.43 41.38 64.50 189.68 328.16 366.21 298.61 101.12 158.85 160.26 26.78 36.61 93.38 71.29 46.90 32.69 16 ER6a ExonRegion 0 48.82 135.23 46.07 76.00 158.76 98.41 113.33 60.96 80.41 78.87 250.12 377.39 307.67 281.78 97.29 200.12 197.83 76.37 50.12 123.05 70.22 72.37 50.02 17 E7a_E8a KnownJunction 0 54.23 166.09 42.07 69.72 218.25 33.45 86.34 53.07 70.17 58.34 260.96 456.30 520.58 361.18 148.22 165.85 220.76 87.59 75.86 162.03 84.57 143.59 82.55 18 ER7a ExonRegion 0 42.40 143.89 51.55 72.61 201.23 72.47 99.66 66.22 84.12 78.94 275.67 407.42 423.56 327.51 152.97 185.09 232.66 87.86 62.39 144.83 84.35 103.67 66.02 19 ER8a ExonRegion 0 37.08 114.21 55.35 109.01 131.40 51.79 112.08 93.20 80.27 97.44 324.96 518.84 561.49 474.72 176.78 325.19 288.89 119.96 117.26 173.67 149.97 197.30 112.34 20 E8_Da NovelBoundary 0 9.41 61.77 16.35 22.44 11.12 23.00 18.37 9.98 16.35 36.64 17.43 5.70 6.82 12.24 16.81 27.17 25.90 6.38 4.42 29.53 10.93 11.39 3.50 21 E8a_E9a KnownJunction 0 35.19 143.53 49.47 121.36 164.43 74.16 150.99 100.80 79.66 81.15 428.11 419.69 471.88 477.43 178.50 325.13 441.05 106.87 95.53 189.96 191.02 204.58 99.45 22 I8 Intron 0 4.49 26.63 7.51 16.46 21.35 16.92 27.74 7.71 11.93 21.10 9.16 22.39 20.40 15.78 9.19 17.42 13.99 9.98 10.72 14.87 4.67 4.94 4.39 23 I8_SR1 SilentIntronRegion 0 4.52 26.82 7.57 16.58 21.51 17.05 27.94 7.77 12.02 21.25 9.23 22.55 20.53 15.90 9.26 17.55 14.10 10.05 10.80 14.98 4.71 4.97 4.43 24 E9_Aa NovelBoundary 0 11.11 29.47 9.22 40.19 47.03 61.27 59.71 21.19 30.44 54.26 13.85 65.87 47.07 20.19 17.80 15.04 13.93 9.29 19.58 19.94 2.72 26.39 23.73 25 ER9a ExonRegion 0 31.83 81.76 53.96 91.36 126.21 56.88 109.40 80.34 65.28 72.34 384.79 543.75 455.89 386.75 111.64 291.16 320.00 112.85 76.15 144.25 192.29 112.66 86.25 26 E9_Da NovelBoundary 0 15.85 51.70 4.26 21.21 34.13 24.30 35.51 13.88 20.14 29.47 6.74 42.61 80.19 22.01 13.85 30.76 9.07 3.86 8.28 18.54 2.90 0.00 7.85 27 E9a_E10a KnownJunction 0 16.82 44.01 50.09 62.43 77.84 55.59 74.81 70.40 47.68 62.10 175.68 556.68 486.33 295.31 111.50 233.27 204.11 115.49 58.17 109.17 166.80 38.64 57.36 28 I9 Intron 0 11.33 23.70 10.56 30.32 33.93 26.12 35.42 12.00 12.23 25.07 11.68 24.44 24.93 28.30 20.34 31.55 12.53 8.41 8.80 14.50 9.12 8.27 7.35 29 I9_SR1 SilentIntronRegion 0 10.88 24.73 10.63 30.55 35.89 24.01 38.15 12.37 12.66 26.08 11.33 24.99 25.76 27.48 19.44 31.68 12.62 5.46 8.17 14.96 8.96 8.95 7.28 30 I9_AR1 ActiveIntronRegion 0 23.02 25.97 13.12 43.39 37.68 59.14 24.47 13.14 12.69 27.91 15.46 32.20 25.50 48.89 37.05 46.25 17.47 36.69 18.71 15.03 13.41 6.95 10.58 31 E10_Aa NovelBoundary 0 6.52 46.04 28.21 41.25 27.42 30.32 27.38 22.51 22.40 54.61 20.74 75.77 33.28 30.84 33.75 68.87 24.12 31.71 38.12 9.33 21.81 8.63 4.10 32 ER10a ExonRegion 0 17.09 97.26 68.16 87.48 108.23 65.88 82.78 70.09 68.27 84.67 192.06 395.93 342.44 322.00 168.99 278.22 237.38 130.98 91.13 115.17 168.92 100.76 75.63 33 E10_Da NovelBoundary 0 13.34 18.62 10.94 29.13 41.85 8.18 21.68 11.54 13.34 22.38 4.74 18.91 33.11 22.72 13.35 12.99 13.18 19.19 10.92 17.39 5.07 0.00 8.71 34 E10a_E11a KnownJunction 0 35.86 166.09 101.53 148.20 170.80 82.28 105.24 101.04 115.97 128.72 195.15 418.94 288.94 340.69 147.48 306.59 313.04 167.35 111.91 125.28 207.57 149.65 72.90 35 I10 Intron 0 1.32 8.91 7.43 24.78 15.07 9.18 15.33 7.25 5.18 10.70 6.05 10.28 6.04 5.80 5.77 14.88 4.13 8.91 6.98 6.66 3.45 3.26 4.59 36 I10_SR1 SilentIntronRegion 0 1.34 9.02 7.52 25.09 15.26 9.29 15.52 7.34 5.25 10.84 6.12 10.41 6.12 5.86 5.84 15.06 4.18 9.02 7.06 6.74 3.49 3.30 4.65 37 E11_Aa NovelBoundary 0 12.97 15.79 27.70 78.11 50.00 22.54 42.75 16.14 15.31 33.04 6.90 12.60 13.64 16.13 10.63 15.98 7.57 15.84 0.00 18.34 3.03 2.51 15.88 38 ER11a ExonRegion 0 68.48 176.71 80.30 130.01 146.62 118.33 161.02 94.49 89.65 122.31 265.92 456.82 406.00 390.70 160.51 319.94 279.44 117.20 131.58 146.79 168.47 132.84 113.73 39 E11a_E12a KnownJunction 0 149.36 219.76 75.93 103.78 241.26 161.04 288.91 90.36 97.02 115.00 223.79 462.00 424.00 345.05 224.86 355.46 198.50 88.21 127.53 173.28 147.52 62.58 105.34 40 ER12a ExonRegion 0 87.46 158.18 80.94 109.33 168.86 119.54 199.06 76.99 86.16 122.32 221.60 368.36 434.78 365.56 197.76 261.47 193.68 79.40 86.95 142.32 137.52 81.31 101.67 41 E12a_E13a KnownJunction 0 56.38 138.20 67.00 103.75 86.59 94.09 147.15 51.47 66.75 104.95 171.73 407.68 333.74 311.14 219.54 189.78 152.31 49.00 65.13 94.21 99.52 105.87 82.38 42 ER13a ExonRegion 0 45.16 160.94 67.00 120.75 165.29 82.60 131.49 70.31 79.66 109.98 142.68 393.40 437.74 266.27 156.06 119.86 124.35 34.49 59.00 94.59 45.15 102.46 44.10