Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCARB1 Gene 0 52.56 53.21 254.14 89.07 43.15 80.90 44.08 80.41 54.35 131.61 796.75 311.34 352.38 591.88 511.38 468.80 499.35 164.07 114.45 106.22 125.91 73.12 71.56 2 415380 Transcript 1 6.67 50.45 228.14 31.73 16.81 45.20 34.23 60.26 23.61 89.69 18.74 12.15 13.64 29.49 23.49 6.49 34.50 75.03 31.44 29.21 17.11 11.63 7.51 3 261693 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 376788 Transcript 0 0.00 0.00 1.36 0.00 0.00 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 339570 Transcript 0 0.00 0.11 0.34 0.00 0.00 0.10 0.15 0.00 0.07 0.06 1.07 0.24 0.26 0.09 0.32 0.17 0.00 0.10 0.18 0.83 0.12 0.23 0.00 6 ER1a ExonRegion 0 19.02 13.47 17.14 3.12 5.27 48.88 16.34 7.42 4.57 17.35 39.91 1.53 1.55 23.24 27.00 27.40 18.17 13.08 20.44 22.26 19.04 6.18 5.27 7 E1_Ab KnownBoundary 0 13.48 5.79 26.58 7.16 7.64 45.49 20.05 8.21 9.40 24.98 62.02 0.00 0.00 52.92 47.22 59.98 40.21 45.18 17.13 18.79 20.70 5.39 13.83 8 ER1b ExonRegion 1 17.34 10.26 62.43 20.75 20.71 32.36 14.22 25.48 19.63 49.46 304.88 41.94 56.73 275.84 233.85 261.04 222.47 84.26 46.79 62.35 56.93 18.45 34.59 9 E1a_E3a KnownJunction 0 29.19 25.13 172.91 76.11 22.84 159.45 69.73 59.43 46.76 116.20 491.02 210.07 167.52 707.46 625.75 701.18 359.14 218.21 114.36 141.07 99.46 74.46 113.79 10 E1a_E5a KnownJunction 0 0.00 0.00 1.36 0.00 0.00 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.00 0.11 0.34 0.00 0.00 0.10 0.15 0.00 0.07 0.06 1.07 0.24 0.26 0.09 0.32 0.17 0.00 0.10 0.18 0.83 0.12 0.23 0.00 12 ER3a ExonRegion 0 30.74 37.56 201.88 59.29 35.02 83.04 54.99 72.51 52.44 139.11 863.86 285.17 319.78 600.39 415.54 483.95 547.28 191.62 137.68 140.18 160.93 58.48 74.87 13 E3a_E4a KnownJunction 0 53.42 52.89 366.07 141.27 26.15 32.20 46.86 108.35 81.10 224.70 1288.22 440.39 494.12 898.53 593.86 887.37 819.63 323.09 253.00 265.00 195.77 119.83 160.40 14 ER4a ExonRegion 0 52.72 33.71 239.05 69.95 32.24 50.04 39.68 71.33 71.24 162.87 1079.25 470.94 527.60 826.00 583.66 516.54 717.41 180.44 135.40 167.62 201.90 92.28 79.77 15 E4a_E5a KnownJunction 0 65.20 31.51 356.23 122.06 26.91 77.06 28.97 86.99 90.48 184.68 940.82 388.93 337.48 607.69 396.44 458.43 560.17 166.23 96.47 152.83 125.10 68.70 93.05 16 ER5a ExonRegion 0 59.49 83.18 329.14 108.48 61.80 119.54 75.63 98.89 88.35 197.09 1307.80 772.66 798.73 936.85 561.32 721.29 819.06 251.11 179.93 186.96 211.34 108.43 103.76 17 E5a_E6a KnownJunction 0 71.05 142.74 460.84 156.66 135.74 220.10 145.60 166.06 99.94 237.94 1649.10 954.46 953.83 1164.52 597.57 913.18 1091.54 301.66 265.33 212.46 247.91 132.57 137.01 18 ER6a ExonRegion 0 41.82 75.77 381.59 142.69 69.99 138.34 77.49 120.11 92.54 200.16 1250.06 846.50 910.89 930.03 534.53 801.14 796.44 328.90 214.25 167.66 194.34 125.84 113.27 19 E6a_E7a KnownJunction 0 74.31 66.63 417.84 205.47 55.69 140.26 89.78 148.85 118.49 232.25 1280.32 973.82 810.17 908.30 804.50 1123.30 775.22 394.30 240.48 241.99 210.35 253.38 178.66 20 E6a_E8a NovelJunction 0 15.04 0.00 6.24 5.66 0.00 7.15 2.25 5.79 1.42 10.58 15.95 0.00 0.00 15.54 4.45 12.73 16.55 20.64 4.05 8.76 4.88 3.06 0.00 21 ER7a ExonRegion 0 41.67 67.34 384.16 141.80 78.89 123.28 73.71 136.37 94.77 232.04 1353.56 832.56 773.01 1016.87 702.13 862.99 874.91 315.26 241.90 165.09 210.78 144.55 155.67 22 E7a_E8a KnownJunction 0 28.23 48.94 359.45 137.31 80.56 63.20 55.82 123.39 85.33 216.56 794.41 526.82 700.77 797.23 692.26 619.15 597.10 244.20 220.90 137.29 156.11 77.71 105.85 23 ER8a ExonRegion 0 89.70 106.18 396.31 143.98 79.65 160.00 79.28 149.36 88.55 245.02 1374.75 565.24 708.70 916.91 684.10 854.67 887.03 330.13 236.54 161.32 206.86 142.03 153.53 24 E8a_E9a KnownJunction 0 119.65 95.90 441.08 136.01 84.80 158.43 113.50 158.14 68.98 243.10 1404.67 511.82 642.81 1114.37 952.60 935.74 850.40 301.66 300.15 156.98 203.19 126.08 148.79 25 E8a_E10a NovelJunction 0 0.00 6.18 4.29 1.40 4.33 4.60 0.00 2.18 1.45 6.12 7.74 0.00 0.00 7.12 15.45 7.78 4.11 0.00 13.46 3.00 2.66 0.00 0.00 26 ER9a ExonRegion 0 57.32 72.00 338.55 102.93 61.11 117.35 66.54 116.68 65.52 187.61 919.17 396.09 612.74 739.41 561.01 570.32 591.80 189.79 153.57 125.01 157.30 75.09 106.61 27 E9a_E10a KnownJunction 0 67.86 97.02 373.38 95.46 107.64 145.77 95.13 113.78 78.21 181.26 767.62 328.76 486.98 673.14 517.34 468.77 578.59 185.34 118.78 124.77 143.26 80.95 87.24 28 ER10a ExonRegion 0 37.44 66.31 326.16 80.02 77.74 128.07 62.94 102.52 76.94 171.11 862.52 312.89 467.80 719.31 551.63 528.80 531.58 217.83 141.15 113.71 126.53 70.64 100.52 29 E10a_E11a KnownJunction 0 50.68 31.84 315.28 64.86 93.29 119.99 64.57 90.53 71.67 162.70 960.40 239.63 417.67 740.25 529.21 517.98 584.85 221.49 124.62 119.33 135.97 75.44 70.17 30 ER11a ExonRegion 0 27.96 43.76 308.84 68.04 52.90 100.65 55.53 87.75 72.14 168.95 807.91 268.18 385.66 729.14 509.78 438.16 520.97 193.30 83.43 121.11 162.10 70.84 58.51 31 E11a_E12a KnownJunction 1 33.19 55.38 326.48 115.97 47.03 130.04 71.10 104.00 80.84 192.95 741.24 215.47 521.72 737.78 557.14 474.75 462.37 245.86 101.09 114.80 166.61 52.29 74.69 32 ER12a ExonRegion 0 44.40 46.59 301.10 90.27 32.66 99.31 46.82 94.39 74.95 160.00 830.30 263.71 360.88 635.22 573.24 478.03 489.88 197.46 129.21 101.85 121.92 70.05 73.90 33 E12_Da NovelBoundary 0 6.15 6.18 51.39 13.15 4.33 4.83 27.03 7.31 2.75 21.09 98.87 58.82 46.59 105.48 56.86 58.19 62.55 50.78 16.75 48.13 11.18 6.25 14.17 34 E12a_E13a KnownJunction 0 22.82 0.00 27.23 20.14 40.24 7.38 1.94 27.72 27.60 26.89 741.08 230.63 228.07 543.65 554.42 497.73 441.23 20.10 30.97 3.26 102.98 73.48 73.67 35 E12a_E14a KnownJunction 0 6.67 50.45 228.14 31.73 16.81 45.20 34.23 60.26 23.61 89.69 18.74 12.15 13.64 29.49 23.49 6.49 34.50 75.03 31.44 29.21 17.11 11.63 7.51 36 I12 Intron 0 22.56 28.59 47.55 36.09 14.39 16.27 17.24 15.15 14.46 17.06 119.60 63.25 74.56 111.52 71.05 94.25 78.88 56.31 32.72 44.59 15.78 12.91 21.74 37 I12_AR1 ActiveIntronRegion 0 6.50 10.70 27.75 11.87 3.91 6.70 4.64 9.03 9.68 9.99 57.34 31.30 38.18 81.34 53.96 43.00 40.51 41.21 9.78 38.55 9.02 6.39 11.59 38 I12_SR1 SilentIntronRegion 0 18.30 27.10 56.42 40.22 12.83 14.14 13.75 15.17 15.19 20.07 130.72 47.80 35.09 112.00 72.82 92.91 92.53 64.94 35.97 47.37 18.47 10.82 22.87 39 I12_AR2 ActiveIntronRegion 0 54.10 52.99 50.98 53.18 30.56 31.63 40.09 24.93 20.32 19.30 161.43 149.30 233.83 147.49 87.40 159.33 87.66 59.15 50.99 51.48 17.76 27.40 32.43 40 E13_Aa NovelBoundary 0 68.31 24.73 90.62 76.31 39.47 12.72 38.24 25.71 23.99 22.11 239.69 159.50 196.42 172.11 123.00 133.64 163.91 77.97 55.72 62.64 21.07 32.45 20.15 41 ER13a ExonRegion 0 59.84 23.30 65.73 44.93 36.82 26.75 20.58 42.89 38.32 31.06 1072.28 343.10 459.19 714.95 601.68 595.02 624.53 57.18 47.73 32.46 109.69 89.01 59.64 42 E13_Da NovelBoundary 0 136.02 65.91 113.30 61.10 11.80 33.33 49.15 45.59 26.50 18.70 185.47 120.64 147.39 134.68 51.42 152.78 101.45 74.37 119.82 79.19 8.34 29.64 68.21 43 E13a_E14a KnownJunction 0 40.75 0.00 60.29 25.20 22.75 5.28 8.35 24.19 19.18 28.55 612.05 224.32 373.84 448.29 519.69 260.87 399.25 10.90 4.33 2.62 75.43 45.07 29.02 44 I13 Intron 0 11.36 26.65 32.00 27.26 23.24 38.80 31.56 11.80 12.20 10.25 111.09 77.25 110.27 103.18 55.81 78.36 64.64 53.81 34.70 40.31 12.52 12.17 16.22 45 I13_AR1 ActiveIntronRegion 0 11.61 27.24 32.71 27.86 23.73 39.66 32.26 12.06 12.47 10.48 113.55 78.96 112.71 105.46 57.03 80.10 66.07 55.00 35.47 41.20 12.79 12.44 16.58 46 I13 Intron 0 17.88 17.17 29.15 28.28 5.02 17.21 4.97 7.66 5.18 9.63 51.10 18.06 12.66 53.99 39.97 71.61 36.15 41.39 22.42 12.32 10.67 8.15 10.11 47 I13_AR1 ActiveIntronRegion 0 17.91 17.22 29.24 28.36 5.04 17.26 4.98 7.68 5.20 9.66 51.24 18.12 12.70 54.16 40.08 71.79 36.26 41.52 22.46 12.34 10.70 8.16 10.14 48 E14_Aa NovelBoundary 0 85.35 43.81 81.34 38.79 8.66 21.86 13.69 23.33 11.60 12.06 65.33 11.70 0.00 51.62 38.69 50.41 55.82 76.98 47.72 8.95 8.22 7.41 3.24 49 ER14a ExonRegion 0 67.62 58.94 281.80 108.48 37.47 65.79 33.25 78.24 41.74 109.11 600.65 143.34 137.39 449.48 566.92 343.70 362.09 118.69 80.35 82.69 90.59 62.14 49.26 50 IG8_SR9 SilentIntergenicRegion 0 2.48 0.00 3.11 1.89 2.01 0.00 6.85 1.40 0.33 0.51 13.27 2.58 2.44 8.56 4.41 5.54 7.24 0.00 0.00 5.61 1.36 0.00 0.00 51 IG8_AR9 ActiveIntergenicRegion 0 3.53 0.00 5.51 2.61 0.00 0.92 4.74 1.73 1.24 1.15 15.46 3.97 4.69 5.41 5.32 6.93 7.43 0.00 0.00 2.84 2.20 0.00 0.00