Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC007622.2 Gene 0 5.14 10.99 4.16 4.07 4.63 4.01 11.25 5.63 6.03 5.55 5.34 6.38 6.31 3.98 1.13 5.05 5.61 5.52 3.96 5.17 6.02 3.98 3.03 2 500685 Transcript 0 2.94 4.77 2.77 2.01 2.16 2.27 5.56 3.05 2.82 2.68 2.36 2.79 3.05 1.72 0.55 2.25 2.51 2.72 1.72 2.19 2.49 1.82 1.43 3 ER1a ExonRegion 0 6.31 8.10 4.41 6.34 8.74 9.12 15.98 9.51 12.86 11.40 12.37 8.61 12.58 6.72 2.62 10.57 7.97 9.14 6.79 7.27 8.44 10.04 7.09 4 E1_Da NovelBoundary 0 6.37 5.39 16.97 9.96 3.57 8.12 13.60 7.43 16.93 11.93 28.74 12.60 12.99 17.25 0.00 8.46 0.00 7.25 18.73 2.88 9.20 8.21 18.78 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 4.64 4.66 2.00 4.45 7.46 7.49 16.22 6.67 8.25 7.83 6.35 6.37 16.10 4.68 1.99 3.85 9.54 3.48 3.17 6.15 6.14 6.02 2.05 7 Ix_AR1 ActiveIntronRegion 0 4.35 4.92 2.71 5.10 8.17 6.80 14.70 6.60 8.21 8.46 7.48 6.02 18.04 5.20 2.21 3.41 10.03 4.72 3.63 5.64 6.18 6.90 2.51 8 Ix_SR1 SilentIntronRegion 0 5.32 4.05 0.35 2.95 5.82 9.11 19.75 6.85 8.34 6.38 3.74 7.17 11.60 3.47 1.47 4.86 8.38 0.61 2.11 7.32 6.05 3.98 0.97 9 E2_Aa NovelBoundary 0 12.97 14.47 4.70 9.16 7.98 19.48 22.88 4.15 5.56 3.30 12.79 6.30 39.93 13.89 8.90 8.29 3.93 8.95 0.00 7.99 20.32 2.76 11.78 10 ER2a ExonRegion 0 3.69 24.79 1.59 4.22 5.56 1.80 11.44 7.03 7.57 3.55 3.15 8.59 7.35 4.77 1.38 3.55 5.76 2.10 2.43 3.25 6.00 4.30 0.96 11 E2_Da NovelBoundary 0 10.74 11.97 4.64 3.73 0.00 5.00 5.65 7.35 17.56 8.65 5.05 0.00 6.82 0.00 0.00 8.46 0.00 0.00 4.80 5.94 5.50 3.12 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E3_Aa NovelBoundary 0 10.89 8.88 3.52 11.32 0.00 14.08 43.77 2.22 6.28 7.55 2.00 0.00 13.15 2.30 4.45 0.00 0.00 6.05 4.80 9.27 8.96 0.00 0.00 14 ER3a ExonRegion 0 5.82 6.18 4.35 3.46 3.28 3.30 11.15 3.48 3.15 5.67 5.68 6.03 3.44 3.66 0.39 5.35 6.57 7.84 5.42 8.05 7.94 2.00 3.34 15 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 Ix_AR3 ActiveIntronRegion 0 12.84 8.18 4.48 2.51 14.29 2.58 22.75 8.76 5.87 4.22 7.07 19.29 7.57 4.76 4.95 8.85 4.43 4.87 4.85 9.82 7.56 1.18 3.20 17 Ix_AR4 ActiveIntronRegion 0 12.59 7.12 9.31 2.73 9.77 0.09 21.78 10.03 5.31 3.73 8.12 7.58 6.57 2.92 1.45 9.81 3.30 2.77 6.37 10.32 2.75 0.00 0.59 18 Ix_AR5 ActiveIntronRegion 0 6.63 10.48 5.52 1.76 5.60 5.20 16.31 5.67 4.19 5.15 4.45 10.60 7.47 3.28 0.46 4.69 5.58 1.23 3.77 8.65 6.05 0.70 1.16 19 Ix_AR6 ActiveIntronRegion 0 6.27 5.39 4.38 3.71 10.48 4.46 19.03 4.94 4.53 4.18 4.34 11.71 3.11 4.33 0.24 2.61 7.87 4.44 3.19 8.22 6.44 2.27 2.81 20 Ix Intron 0 16.84 8.95 8.89 8.55 11.78 7.72 27.13 8.93 8.81 8.80 9.94 11.42 12.93 7.38 4.23 5.01 6.80 3.36 3.28 8.36 3.92 8.19 5.22 21 Ix_AR1 ActiveIntronRegion 0 17.90 9.61 10.22 9.35 11.67 8.66 26.98 11.18 9.84 10.84 9.10 13.40 16.30 7.46 3.99 4.81 7.39 3.78 2.73 7.68 3.56 9.85 5.48 22 Ix_SR1 SilentIntronRegion 0 13.81 7.05 4.91 6.23 12.31 4.95 27.99 2.14 5.76 2.62 12.69 5.44 2.75 7.24 5.04 5.70 5.06 2.11 5.03 10.61 5.07 3.20 4.50 23 Ix_AR1 ActiveIntronRegion 0 2.12 4.75 2.45 2.27 2.68 14.98 11.92 0.00 5.97 8.03 0.00 20.20 4.69 2.17 0.00 5.45 0.00 1.85 0.00 6.38 4.41 8.33 0.00 24 Ix_AR2 ActiveIntronRegion 0 3.41 4.01 5.00 2.74 6.18 7.17 16.43 2.27 4.90 4.50 1.67 4.02 7.35 3.27 1.81 1.75 2.89 1.60 2.34 4.05 3.12 7.33 1.73 25 Ix_SR2 SilentIntronRegion 0 11.01 8.52 7.12 7.05 9.66 3.44 16.26 5.95 4.25 2.47 3.63 6.22 8.93 5.23 4.86 5.58 4.29 1.07 1.84 5.22 1.27 6.62 2.12 26 Ix_AR3 ActiveIntronRegion 0 12.01 1.24 14.66 6.76 14.21 8.70 20.36 10.55 5.57 5.51 6.07 4.02 9.99 6.58 7.29 1.97 5.12 6.07 0.00 8.69 1.46 2.54 7.25 27 Ix_AR4 ActiveIntronRegion 0 26.96 6.11 9.99 7.27 17.17 6.88 24.24 6.40 5.90 5.69 8.57 2.08 8.98 6.64 6.99 2.95 6.77 2.71 2.11 10.97 3.65 4.99 8.28 28 ER4a ExonRegion 0 7.32 1.76 6.99 0.88 1.16 4.76 5.68 1.93 0.83 2.22 0.00 0.00 0.04 0.00 0.00 0.00 1.43 3.52 0.00 0.00 0.00 0.00 0.00 29 E4_Da NovelBoundary 0 22.08 84.52 67.98 60.63 70.63 32.37 47.08 42.51 62.15 47.01 13.95 6.15 12.99 17.66 26.45 56.74 57.50 54.64 44.33 78.17 31.26 8.21 7.77 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 3.29 2.11 7.57 3.15 0.69 1.42 5.83 3.31 0.95 1.33 0.00 1.85 4.00 0.35 0.53 0.77 0.85 1.91 0.82 1.10 0.00 0.00 1.52